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FFCP PHASE1:Mm9::chr3:136333420..136333438,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=19055
|EntrezGene=19055
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=P63328,B2RRX2
|UniProt=P63328,B2RRX2
|association_with_transcript=-295bp_to_ENSMUST00000056758,NM_008913,uc008rmg.1,uc008rmh.1_5end
|association_with_transcript=-295bp_to_ENSMUST00000056758,NM_008913,uc008rmg.1,uc008rmh.1_5end
|cluster_id=chr3:136333420..136333438,+
|description=CAGE_peak_4_at_Ppp3ca_5end
|description=CAGE_peak_4_at_Ppp3ca_5end
|id=chr3:136333420..136333438,+
|id=chr3:136333420..136333438,+
|ontology_enrichment_celltype=CL:0000117!4.33e-08!23;CL:0000337!4.33e-08!23
|ontology_enrichment_celltype=CL:0000117!4.33e-08!23;CL:0000337!4.33e-08!23
|ontology_enrichment_celltype_v019_2=CL:0000117,7.32e-09,23;CL:0000337,7.32e-09,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon=UBERON:0000033!1.75e-17!63;UBERON:0001049!4.08e-15!52;UBERON:0005068!4.08e-15!52;UBERON:0006241!4.08e-15!52;UBERON:0007135!4.08e-15!52;UBERON:0003056!4.65e-15!49;UBERON:0004121!4.73e-15!102;UBERON:0000924!4.73e-15!102;UBERON:0006601!4.73e-15!102;UBERON:0002020!7.35e-15!34;UBERON:0000955!1.27e-14!50;UBERON:0006238!1.27e-14!50;UBERON:0002346!1.36e-14!71;UBERON:0003075!1.36e-14!71;UBERON:0007284!1.36e-14!71;UBERON:0001017!1.47e-14!73;UBERON:0005743!1.47e-14!73;UBERON:0002616!4.77e-14!49;UBERON:0000073!5.33e-14!75;UBERON:0001016!5.33e-14!75;UBERON:0002791!1.32e-12!29;UBERON:0003528!1.32e-12!29;UBERON:0001893!1.32e-12!29;UBERON:0003080!7.30e-12!40;UBERON:0002780!2.37e-11!39;UBERON:0001890!2.37e-11!39;UBERON:0006240!2.37e-11!39;UBERON:0002619!3.67e-09!17;UBERON:0000956!1.63e-08!21;UBERON:0001869!1.63e-08!21;UBERON:0000203!1.63e-08!21;UBERON:0007811!4.47e-08!86;UBERON:0002021!4.85e-08!10;UBERON:0000411!4.85e-08!10;UBERON:0001950!4.85e-08!10;UBERON:0000153!1.28e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.70e-24,54;UBERON:0002346,1.87e-23,64;UBERON:0003075,1.87e-23,64;UBERON:0007284,1.87e-23,64;UBERON:0001049,4.46e-22,52;UBERON:0005068,4.46e-22,52;UBERON:0006241,4.46e-22,52;UBERON:0007135,4.46e-22,52;UBERON:0010371,7.02e-21,73;UBERON:0004121,7.54e-20,95;UBERON:0000924,7.54e-20,95;UBERON:0006601,7.54e-20,95;UBERON:0003056,1.73e-19,49;UBERON:0000955,2.58e-19,47;UBERON:0006238,2.58e-19,47;UBERON:0002020,4.45e-19,34;UBERON:0001017,6.48e-19,73;UBERON:0002616,2.33e-18,46;UBERON:0001016,4.90e-18,75;UBERON:0003080,1.74e-16,40;UBERON:0003528,2.04e-16,29;UBERON:0002791,2.04e-16,29;UBERON:0001893,2.04e-16,29;UBERON:0002780,1.27e-15,39;UBERON:0001890,1.27e-15,39;UBERON:0006240,1.27e-15,39;UBERON:0010314,1.59e-13,92;UBERON:0002021,3.62e-13,10;UBERON:0000411,3.62e-13,10;UBERON:0001950,3.62e-13,10;UBERON:0002619,6.41e-11,17;UBERON:0000956,1.33e-09,21;UBERON:0001869,1.33e-09,21;UBERON:0000203,1.33e-09,21;UBERON:0002420,1.21e-08,8;UBERON:0007245,1.21e-08,8;UBERON:0010009,1.21e-08,8;UBERON:0010011,1.21e-08,8;UBERON:0000454,1.21e-08,8
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|phase1_expression=0.320297694209588,0,0,0,0.500895729946347,0.33575854382378,0.233612640595526,0.258246646883153,1.12630977721333,1.40438715793196,0.34243593645101,0.159544317990673,0.513602189793617,0.262261207256992,0,0.202475267389826,0,0.946386496074713,0.685572168028694,0,4.33720779770456,0.297872853602656,0,0.159992422793407,0.22940928106717,0,0,0,0.380046838912748,0,0,0.635030673459631,0,0,0.577703239502549,0.332469290716985,0.204169356262369,0,0,0,0.588231488031014,0,0,0.125896817975577,0.202753862439029,0.183546752161682,0,0.218025156380447,0.659058548203415,0.58328969722285,0,0,1.17447824240415,0.725362142011344,0.336093799142464,1.02903774414379,0,0.515672092277442,1.61853168687678,1.05798195854407,0.633831403506179,0,0,0.449949858640699,0,1.4209602298922,0.299600110518405,0.384218305321555,0.414758449233911,0.270011876663381,0.420649922702764,2.28520787523043,3.3130281142742,0.734944795289724,0.766763768145891,1.83843757322004,4.40463523997555,8.68273898979276,5.37622866396852,1.45074916503213,1.64677758484337,1.56274011167028,2.79182999001381,2.8138130501584,5.19514042441154,2.35702868378934,2.42031857358475,0.931997229126503,0.302904773332736,0.302286240427142,0.869593466105033,0.860423876981386,0,0,0,0.448026887097336,2.10666630197628,1.02258193546835,1.03914401841148,0.35333957451034,0.563373679106722,0,0,0,0.216491041011214,0.760079596425296,1.51657333504435,1.02765491747154,1.29468941823586,0.148442139064825,0.346970653532272,0,0,0.904335843315735,0.352766121407114,0.502666365318702,0.247194967734374,0.433798070759735,0,1.13236794963186,2.65009822152472,0.969750506270444,0,3.80615036115011,1.46612694769419,0.510914110417183,0.479260498023681,1.19980546198682,0.381210681219194,2.84602214869163,52.1550687213234,4.39790232395025,20.3374454624963,29.1515621356577,6.64921742590592,20.1179166204019,0.611036183101898,0.746441823660558,0.505445516867349,2.31486041475121,0.520481771850815,0.689706313300419,0.900310649026746,1.20563854268572,2.78949646520444,2.562274405697,3.27956035959051,3.88055056108524,0.215567992932842,0.189106080167819,0.527853372491847,0.219195732427575,0,1.0447564995665,0.61734640922383,0.59710280045548,0,0.772043721344145,0,0.621377317606506,0.469052119962192,1.08037236876609,0.710234206755631,0.196764231747404,0.154267112887378,0.697601834251224,0,0.233530684734339,0.822799249567402,0.32833492815819,0.405344047729279,0.584799949701329,0.439100230582101,0,28.5994330047213,1.3377599609307,0,0.264450566663544,0.426576501070468,0,0.38660238396628,0.201683524623343,0,0.380451252225118,0.949058123089023,0,0.502670417600539,0.596869416123452,0.58489226135736,0,0.432276099749388,0,0.379335801906163,0.114248512609729,0,0.407302655690628,0,0.561086559122548,0.569128834118316,0.442830443938806,0.470996183524124,0.370191491765402,0,0.333690211432188,0.196558995113203,0,0.202860121388503,0.241177159752417,0,0.287696137450811,0.162135226775035,0,1.43768206527355,0,0.312037673114561,0.505157755894224,0,0,0.369506380333209,0.189491411770485,0,0.169745085775188,0.469380496577004,0.335012514883631,0.476087281772027,1.75620283072019,0.315270288212382,0.664394068946325,0.318909537314974,0,0.518054945597687,1.15719246865209,3.01582567878545,1.08781136763742,0,0.827810238914197,2.24770825982909,1.87538698547525,0,1.76729649043061,0.315508219416257,0,0.430846795465598,0.238968797952552,0.891194696329576,0.283076530788832,0.809621403349789,0.876767573733936,0.790575555893047,4.81981974632711,0.567760340833074,0.534196811001766,0.325773918707152,0.659880491890142,1.32745138339963,0,0,0.188605079755898,0,0,0.775284879504663,0.363533729477506,0,1.8962205476149,0,1.03135543248187,2.04263763452273,0.18006109403131,0,0.214337035031592,0.532020700926821,1.78368817602071,0.658196082408484,0,0.23467170806371,0.847328283455281,0,1.15420377059036,0.322928853391811,0.482503399425247,0.358117032009409,1.14898629821543,0,4.07935664423121,0.170870880797853,0.412773735926445,0,0.188368457004691,0.27338845544205,0.228778173206523,0.339956859987711,0.559805809294632,0.414599921413271,0,0,0.813277868507395,0.216010681643603,0.209088296014469,0.218362563746178,0.269728692769641,0.578574190077352,0.26175594198403,0.259229946583586,1.24267862617385,1.12738587736838,0.448549638131936,0.165458490457098,0.583353565032143,0.129159823477731,0.168956125490778,0.352071715937262,0,0.209718688851422,0.483168241652012,1.44015003128933,0,0.405450430580328,0.102710957164827,0.129920822977795,0,0,0.240390899039938,0,0.100966449948148,0.15241361331,0,0,0,0.116876902181569,0.226730383615211,0,0,0.335769232728157,1.15913756419314,0.187682475451182,0.549454872801795,0.643105137237198,0,14.6835479080437,18.4130094602871,19.4784474569395,13.9201077698387,26.0331357512844,36.2589070747056,27.0009000092722,26.1186297870048,28.0948293570207,35.2077011991238,0.415149390336707,0,0.341467211508268,0.486213434136588,0,0.919217542250071,0.888986911206461,0.206035057238894,0.320919209591815,0.505394423527595,0.25347929989024,0.943131706930381,1.03005658216871,1.15245274328765,0.689225627467359,0.476293691283074,0.695305955669133,0.77163688185482,0,0.588795680537589,0.342869252385415,0.354951612318675,0.953744759789284,1.0174249164263,0.564656282491984,0.423073039458382,1.09756783723664,0.526139422875686,0.407412341537585,0.561142271657738,1.06771516311757,0.886540341380071,2.45538625901814,0.154936841185966,0.385813221962283,1.24905288968973,0.233931608445408,0.644613162144895,1.3390183244819,0.661774257358546,1.15933917810211
|short_description=p4@Ppp3ca
|short_description=p4@Ppp3ca
}}
}}

Latest revision as of 16:17, 1 October 2015

Short description:p4@Ppp3ca
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Ppp3ca_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: -295bp_to_ENSMUST00000056758, NM_008913, uc008rmg.1, uc008rmh.1_5end
EntrezGene:Ppp3ca
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Ppp3ca

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.40
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.51
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.26
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.95
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.69
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C31.62
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.31
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.73
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.77
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F38.68
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.45
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.65
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.79
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.20
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.36
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.11
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.03
accessory axillary lymph node, adult.CNhs10475.1063-29H91.29
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.13
bone (os femoris), neonate N16.CNhs11225.1525-43A62.65
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.81
cerebellum, neonate N30.CNhs11135.1395-42I21.47
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.48
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A42.85
corpus striatum, adult.CNhs10487.19-21D852.16
corpus striatum, neonate N00.CNhs11226.630-43F14.40
cortex, adult.CNhs10473.12-14D520.34
cortex, neonate N30.CNhs11107.1392-42F229.15
diencephalon, adult.CNhs10482.20-12F26.65
diencephalon, neonate N30.CNhs11201.1388-42B220.12
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G42.31
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C62.79
eyeball, neonate N01.CNhs11140.1532-43E72.56
eyeball, neonate N02.CNhs11205.1551-44G83.28
eyeball, neonate N16.CNhs11188.777-19A23.88
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E828.60
hippocampus, neonate N00.CNhs11228.627-43G11.34
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.56
kidney, neonate N10.CNhs11206.758-6D50.57
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C61.76
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H21.16
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C22.25
medulla oblongata, neonate N30.CNhs11200.1396-42A31.88
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.77
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I94.82
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B61.90
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F61.78
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C31.15
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.48
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C41.15
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C94.08
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E41.16
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A114.68
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A218.41
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A319.48
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D713.92
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A426.03
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A536.26
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A627.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A726.12
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A828.09
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A935.21
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.15
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)7.32e-0923
neuroblast (sensu Vertebrata)7.32e-0923

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.70e-2454
neurectoderm1.87e-2364
neural plate1.87e-2364
presumptive neural plate1.87e-2364
neural tube4.46e-2252
neural rod4.46e-2252
future spinal cord4.46e-2252
neural keel4.46e-2252
ecto-epithelium7.02e-2173
ectoderm-derived structure7.54e-2095
ectoderm7.54e-2095
presumptive ectoderm7.54e-2095
pre-chordal neural plate1.73e-1949
brain2.58e-1947
future brain2.58e-1947
gray matter4.45e-1934
central nervous system6.48e-1973
regional part of brain2.33e-1846
nervous system4.90e-1875
anterior neural tube1.74e-1640
brain grey matter2.04e-1629
regional part of telencephalon2.04e-1629
telencephalon2.04e-1629
regional part of forebrain1.27e-1539
forebrain1.27e-1539
future forebrain1.27e-1539
structure with developmental contribution from neural crest1.59e-1392
occipital lobe3.62e-1310
visual cortex3.62e-1310
neocortex3.62e-1310
regional part of cerebral cortex6.41e-1117
cerebral cortex1.33e-0921
cerebral hemisphere1.33e-0921
pallium1.33e-0921
basal ganglion1.21e-088
nuclear complex of neuraxis1.21e-088
aggregate regional part of brain1.21e-088
collection of basal ganglia1.21e-088
cerebral subcortex1.21e-088
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