FFCP PHASE1:Mm9::chr12:3365218..3365229,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16570 | |EntrezGene=16570 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=13 | |MCL_coexpression_id=13 | ||
|TSSclassifier=NA | |||
|UniProt=O35066,Q571A6 | |UniProt=O35066,Q571A6 | ||
|association_with_transcript=86bp_to_ENSMUST00000020999,ENSMUST00000168012,NM_008445,uc007mwm.1,uc007mwn.1_5end | |association_with_transcript=86bp_to_ENSMUST00000020999,ENSMUST00000168012,NM_008445,uc007mwm.1,uc007mwn.1_5end | ||
|cluster_id=chr12:3365218..3365229,+ | |||
|description=CAGE_peak_5_at_Kif3c_5end | |description=CAGE_peak_5_at_Kif3c_5end | ||
|id=chr12:3365218..3365229,+ | |id=chr12:3365218..3365229,+ | ||
|ontology_enrichment_celltype=CL:0000117!1.23e-18!23;CL:0000337!1.23e-18!23;CL:0000540!4.24e-18!33;CL:0000047!4.24e-18!33;CL:0000031!4.24e-18!33;CL:0000404!4.24e-18!33;CL:0002319!1.03e-17!43;CL:0000221!6.58e-17!44;CL:0000133!6.58e-17!44;CL:0000393!9.04e-14!39;CL:0000211!9.04e-14!39;CL:0000055!1.65e-13!50 | |ontology_enrichment_celltype=CL:0000117!1.23e-18!23;CL:0000337!1.23e-18!23;CL:0000540!4.24e-18!33;CL:0000047!4.24e-18!33;CL:0000031!4.24e-18!33;CL:0000404!4.24e-18!33;CL:0002319!1.03e-17!43;CL:0000221!6.58e-17!44;CL:0000133!6.58e-17!44;CL:0000393!9.04e-14!39;CL:0000211!9.04e-14!39;CL:0000055!1.65e-13!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.30e-44,23;CL:0000337,1.30e-44,23;CL:0000540,3.64e-29,33;CL:0000047,3.64e-29,33;CL:0000031,3.64e-29,33;CL:0000404,3.64e-29,33;CL:0002319,8.15e-25,43;CL:0000221,4.25e-24,44;CL:0000133,4.25e-24,44;CL:0000393,1.05e-23,39;CL:0000211,1.05e-23,39;CL:0002321,1.07e-12,70;CL:0002609,2.37e-12,6;CL:0002613,1.07e-07,3;CL:0000120,1.31e-07,3;CL:0000723,1.65e-07,91;CL:0000048,1.65e-07,91;CL:0002612,2.56e-07,3;CL:0002608,5.16e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.78e-28!75;UBERON:0001016!4.78e-28!75;UBERON:0001017!2.01e-27!73;UBERON:0005743!2.01e-27!73;UBERON:0004121!3.52e-24!102;UBERON:0000924!3.52e-24!102;UBERON:0006601!3.52e-24!102;UBERON:0002346!6.90e-21!71;UBERON:0003075!6.90e-21!71;UBERON:0007284!6.90e-21!71;UBERON:0002020!5.60e-19!34;UBERON:0001049!6.20e-19!52;UBERON:0005068!6.20e-19!52;UBERON:0006241!6.20e-19!52;UBERON:0007135!6.20e-19!52;UBERON:0000033!1.28e-17!63;UBERON:0000955!4.17e-17!50;UBERON:0006238!4.17e-17!50;UBERON:0002616!1.72e-16!49;UBERON:0003056!4.98e-16!49;UBERON:0002791!4.51e-15!29;UBERON:0003528!4.51e-15!29;UBERON:0001893!4.51e-15!29;UBERON:0003080!6.26e-14!40;UBERON:0002780!1.34e-13!39;UBERON:0001890!1.34e-13!39;UBERON:0006240!1.34e-13!39;UBERON:0000153!3.19e-10!94;UBERON:0007811!4.87e-10!86;UBERON:0000956!1.17e-09!21;UBERON:0001869!1.17e-09!21;UBERON:0000203!1.17e-09!21;UBERON:0002619!5.66e-07!17;UBERON:0002420!6.63e-07!8;UBERON:0007245!6.63e-07!8;UBERON:0010009!6.63e-07!8;UBERON:0010011!6.63e-07!8;UBERON:0000454!6.63e-07!8 | |ontology_enrichment_uberon=UBERON:0000073!4.78e-28!75;UBERON:0001016!4.78e-28!75;UBERON:0001017!2.01e-27!73;UBERON:0005743!2.01e-27!73;UBERON:0004121!3.52e-24!102;UBERON:0000924!3.52e-24!102;UBERON:0006601!3.52e-24!102;UBERON:0002346!6.90e-21!71;UBERON:0003075!6.90e-21!71;UBERON:0007284!6.90e-21!71;UBERON:0002020!5.60e-19!34;UBERON:0001049!6.20e-19!52;UBERON:0005068!6.20e-19!52;UBERON:0006241!6.20e-19!52;UBERON:0007135!6.20e-19!52;UBERON:0000033!1.28e-17!63;UBERON:0000955!4.17e-17!50;UBERON:0006238!4.17e-17!50;UBERON:0002616!1.72e-16!49;UBERON:0003056!4.98e-16!49;UBERON:0002791!4.51e-15!29;UBERON:0003528!4.51e-15!29;UBERON:0001893!4.51e-15!29;UBERON:0003080!6.26e-14!40;UBERON:0002780!1.34e-13!39;UBERON:0001890!1.34e-13!39;UBERON:0006240!1.34e-13!39;UBERON:0000153!3.19e-10!94;UBERON:0007811!4.87e-10!86;UBERON:0000956!1.17e-09!21;UBERON:0001869!1.17e-09!21;UBERON:0000203!1.17e-09!21;UBERON:0002619!5.66e-07!17;UBERON:0002420!6.63e-07!8;UBERON:0007245!6.63e-07!8;UBERON:0010009!6.63e-07!8;UBERON:0010011!6.63e-07!8;UBERON:0000454!6.63e-07!8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.25e-43,73;UBERON:0002020,5.94e-42,34;UBERON:0001016,1.56e-41,75;UBERON:0000073,8.58e-41,54;UBERON:0001049,1.24e-37,52;UBERON:0005068,1.24e-37,52;UBERON:0006241,1.24e-37,52;UBERON:0007135,1.24e-37,52;UBERON:0003528,2.94e-32,29;UBERON:0002791,2.94e-32,29;UBERON:0001893,2.94e-32,29;UBERON:0004121,8.48e-31,95;UBERON:0000924,8.48e-31,95;UBERON:0006601,8.48e-31,95;UBERON:0002346,5.39e-29,64;UBERON:0003075,5.39e-29,64;UBERON:0007284,5.39e-29,64;UBERON:0000955,8.02e-29,47;UBERON:0006238,8.02e-29,47;UBERON:0002616,2.04e-27,46;UBERON:0002780,1.30e-26,39;UBERON:0001890,1.30e-26,39;UBERON:0006240,1.30e-26,39;UBERON:0003080,8.77e-26,40;UBERON:0010371,2.22e-24,73;UBERON:0000956,6.22e-21,21;UBERON:0001869,6.22e-21,21;UBERON:0000203,6.22e-21,21;UBERON:0003056,7.66e-20,49;UBERON:0010314,1.30e-17,92;UBERON:0002619,2.73e-14,17;UBERON:0002240,1.30e-12,6;UBERON:0005174,1.30e-12,6;UBERON:0001137,1.30e-12,6;UBERON:0000025,1.32e-12,114;UBERON:0002420,1.92e-12,8;UBERON:0007245,1.92e-12,8;UBERON:0010009,1.92e-12,8;UBERON:0010011,1.92e-12,8;UBERON:0000454,1.92e-12,8;UBERON:0003076,5.23e-12,12;UBERON:0003057,5.23e-12,12;UBERON:0004111,3.06e-11,122;UBERON:0001948,5.23e-11,5;UBERON:0002315,5.23e-11,5;UBERON:0011216,3.73e-10,194;UBERON:0002021,1.73e-08,10;UBERON:0000411,1.73e-08,10;UBERON:0001950,1.73e-08,10;UBERON:0000369,1.84e-07,5;UBERON:0002435,1.84e-07,5;UBERON:0000204,1.84e-07,5;UBERON:0010082,1.84e-07,5;UBERON:0002257,2.56e-07,3;UBERON:0001954,2.95e-07,7;UBERON:0003022,2.95e-07,7;UBERON:0002421,2.95e-07,7;UBERON:0000349,2.95e-07,7;UBERON:0002600,2.95e-07,7 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0.274228867211478,0,0.255129870453209,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0.194429899074283,0.55994568650145,1.43752564364972,0,0,0,0,0,0,3.43937983461316,4.7609188134483,5.07065122804943,0,0,0.449949858640699,0,0,1.19840044207362,0.384218305321555,4.25127410464758,2.56511282830212,2.3135745748652,3.14216082844184,3.53389665522582,2.9397791811589,3.54628242767475,2.75765635983006,2.20231761998777,2.042997409363,1.68967186581868,3.95658863190582,5.30628332893976,4.68822033501084,2.23346399201105,2.25105044012672,2.90316670775939,4.41942878210502,4.41352210477219,2.60959224155421,0.227178579999552,0.453429360640713,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0.35333957451034,0,0,0,0,0,0,0,0,0,0.148442139064825,0.173485326766136,0.913396434936424,0,0.452167921657868,0.117588707135705,0,0,0,0,0,0,0,0,1.17112318804619,1.04723353406728,0,0,0,0,0.449371918214468,0.457500602818626,2.51308704225729,3.12883776346098,1.27857728665165,1.45451631191692,1.1356888414743,0.203678727700633,0.124406970610093,0,0.210441855886474,0.130120442962704,0.229902104433473,0.180062129805349,0.452114453507145,0.748401490664606,0.768682321709099,0.562210347358373,0.258703370739016,0.431135985865684,0.378212160335639,0,0.219195732427575,0.556094498451196,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0.154267112887378,0.232533944750408,0,0,0,0,0,0,0,0,1.26173969138476,4.42489833230923,0,0,0.213288250535234,0.232236671860439,0.515469845288373,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0.407302655690628,0,0.210407459670956,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0.339490171550376,0,0,0,0,0,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0,0.481651769963376,1.75817529888305,0.163934945376675,0.252470927204373,0.315508219416257,0,0.861693590931196,0,0.222798674082394,0.283076530788832,0.404810701674894,0.876767573733936,0.395287777946524,1.60660658210904,0.141940085208269,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0.258717367565509,0.214337035031592,0,0.356737635204141,0.329098041204242,0,0,0.21183207086382,0,0,0,0,0,0.164140899745061,0,2.22510362412612,0,0,0,0,0,0,0,0,0,0,0.474503990371703,0,0.108005340821801,0,0,0.134864346384821,0,0,0,0,0,0.149516546043979,0,0.194451188344048,0.258319646955462,0.168956125490778,0,0.13020438484395,0.209718688851422,0,0,0,0,0,0,0,0.198681354781265,0.120195449519969,0,0.302899349844443,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,1.84130094602871,4.01026859407578,3.78077001156113,0,0,2.02506750069542,1.35096360967266,0.906284817968409,1.55328093525546,0.31136204275253,0.798049746802062,0.682934423016537,0.972426868273176,0.628839487883947,1.10306105070008,0.222246727801615,0.412070114477788,0,0.252697211763798,0.760437899670719,0.188626341386076,0.842773567228942,0.192075457214608,0.459483751644906,0.952587382566147,0.927074607558844,0.77163688185482,0,0.588795680537589,0,0.354951612318675,1.43061713968393,0.581385666529314,0.376437521661322,0.423073039458382,0.365855945745545,0.789209134313529,0.814824683075171,0,0.593175090620871,0.591026894253381,0.409231043169689,0.154936841185966,0.385813221962283,1.74867404556562,0.467863216890817,0.214871054048298,0.191288332068843,0.220591419119515,0.463735671240843 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|phase1_expression=0.320297694209588,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0.274228867211478,0,0.255129870453209,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0.194429899074283,0.55994568650145,1.43752564364972,0,0,0,0,0,0,3.43937983461316,4.7609188134483,5.07065122804943,0,0,0.449949858640699,0,0,1.19840044207362,0.384218305321555,4.25127410464758,2.56511282830212,2.3135745748652,3.14216082844184,3.53389665522582,2.9397791811589,3.54628242767475,2.75765635983006,2.20231761998777,2.042997409363,1.68967186581868,3.95658863190582,5.30628332893976,4.68822033501084,2.23346399201105,2.25105044012672,2.90316670775939,4.41942878210502,4.41352210477219,2.60959224155421,0.227178579999552,0.453429360640713,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0.35333957451034,0,0,0,0,0,0,0,0,0,0.148442139064825,0.173485326766136,0.913396434936424,0,0.452167921657868,0.117588707135705,0,0,0,0,0,0,0,0,1.17112318804619,1.04723353406728,0,0,0,0,0.449371918214468,0.457500602818626,2.51308704225729,3.12883776346098,1.27857728665165,1.45451631191692,1.1356888414743,0.203678727700633,0.124406970610093,0,0.210441855886474,0.130120442962704,0.229902104433473,0.180062129805349,0.452114453507145,0.748401490664606,0.768682321709099,0.562210347358373,0.258703370739016,0.431135985865684,0.378212160335639,0,0.219195732427575,0.556094498451196,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0.154267112887378,0.232533944750408,0,0,0,0,0,0,0,0,1.26173969138476,4.42489833230923,0,0,0.213288250535234,0.232236671860439,0.515469845288373,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0.407302655690628,0,0.210407459670956,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0.339490171550376,0,0,0,0,0,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0,0.481651769963376,1.75817529888305,0.163934945376675,0.252470927204373,0.315508219416257,0,0.861693590931196,0,0.222798674082394,0.283076530788832,0.404810701674894,0.876767573733936,0.395287777946524,1.60660658210904,0.141940085208269,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0.258717367565509,0.214337035031592,0,0.356737635204141,0.329098041204242,0,0,0.21183207086382,0,0,0,0,0,0.164140899745061,0,2.22510362412612,0,0,0,0,0,0,0,0,0,0,0.474503990371703,0,0.108005340821801,0,0,0.134864346384821,0,0,0,0,0,0.149516546043979,0,0.194451188344048,0.258319646955462,0.168956125490778,0,0.13020438484395,0.209718688851422,0,0,0,0,0,0,0,0.198681354781265,0.120195449519969,0,0.302899349844443,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,1.84130094602871,4.01026859407578,3.78077001156113,0,0,2.02506750069542,1.35096360967266,0.906284817968409,1.55328093525546,0.31136204275253,0.798049746802062,0.682934423016537,0.972426868273176,0.628839487883947,1.10306105070008,0.222246727801615,0.412070114477788,0,0.252697211763798,0.760437899670719,0.188626341386076,0.842773567228942,0.192075457214608,0.459483751644906,0.952587382566147,0.927074607558844,0.77163688185482,0,0.588795680537589,0,0.354951612318675,1.43061713968393,0.581385666529314,0.376437521661322,0.423073039458382,0.365855945745545,0.789209134313529,0.814824683075171,0,0.593175090620871,0.591026894253381,0.409231043169689,0.154936841185966,0.385813221962283,1.74867404556562,0.467863216890817,0.214871054048298,0.191288332068843,0.220591419119515,0.463735671240843 | ||
|short_description=p5@Kif3c | |short_description=p5@Kif3c | ||
}} | }} |
Latest revision as of 13:44, 26 September 2015
Short description: | p5@Kif3c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Kif3c_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 86bp_to_ENSMUST00000020999, ENSMUST00000168012, NM_008445, uc007mwm.1, uc007mwn.1_5end |
EntrezGene: | Kif3c |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.30e-44 | 23 |
neuroblast (sensu Vertebrata) | 1.30e-44 | 23 |
neuron | 3.64e-29 | 33 |
neuronal stem cell | 3.64e-29 | 33 |
neuroblast | 3.64e-29 | 33 |
electrically signaling cell | 3.64e-29 | 33 |
neural cell | 8.15e-25 | 43 |
ectodermal cell | 4.25e-24 | 44 |
neurectodermal cell | 4.25e-24 | 44 |
electrically responsive cell | 1.05e-23 | 39 |
electrically active cell | 1.05e-23 | 39 |
embryonic cell | 1.07e-12 | 70 |
neuron of cerebral cortex | 2.37e-12 | 6 |
striatum neuron | 1.07e-07 | 3 |
granule cell | 1.31e-07 | 3 |
somatic stem cell | 1.65e-07 | 91 |
multi fate stem cell | 1.65e-07 | 91 |
neuron of the ventral spinal cord | 2.56e-07 | 3 |
hippocampal neuron | 5.16e-07 | 3 |