FFCP PHASE1:Hg19::chr2:37311414..37311443,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:37311414..37311443,-
|short_description=p2@HEATR5B
|description=CAGE_peak_2_at_HEATR5B_5end
|association_with_transcript=41bp_to_ENST00000233099,ENST000003...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54497 | |EntrezGene=54497 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29273 | |HGNC=29273 | ||
|TSSclassifier=strong | |||
|UniProt=Q9P2D3 | |UniProt=Q9P2D3 | ||
|association_with_transcript=41bp_to_ENST00000233099,ENST00000354531,ENST00000424416,NM_019024,uc002rpp.1_5end | |||
|cluster_id=chr2:37311414..37311443,- | |||
|description=CAGE_peak_2_at_HEATR5B_5end | |||
|id=chr2:37311414..37311443,- | |||
|ontology_enrichment_celltype=CL:0000542!2.90e-14!53;CL:0000051!2.90e-14!53;CL:0000738!3.71e-14!140;CL:0000838!8.64e-14!52;CL:0002087!1.46e-13!119;CL:0002031!8.38e-13!124;CL:0000037!1.12e-11!172;CL:0000566!1.12e-11!172;CL:0002032!2.45e-10!165;CL:0000837!2.45e-10!165;CL:0000988!9.89e-10!182;CL:0000791!1.65e-08!18;CL:0000789!1.65e-08!18;CL:0002420!1.65e-08!18;CL:0002419!1.65e-08!18;CL:0000790!1.65e-08!18;CL:0000945!5.64e-08!24;CL:0000826!5.64e-08!24;CL:0000236!3.63e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.99e-10;18!CL:0000789;3.99e-10;18!CL:0002419;3.99e-10;18!CL:0000542;7.27e-10;53!CL:0000236;6.53e-08;13!CL:0000945;9.13e-08;24!CL:0000084;9.53e-08;25!CL:0000625;1.89e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,8.30e-16,136;CL:0000542,2.29e-15,53;CL:0000051,2.29e-15,53;CL:0000838,8.83e-15,52;CL:0002087,1.26e-14,115;CL:0002031,1.11e-13,120;CL:0000037,7.34e-12,168;CL:0000988,2.52e-10,177;CL:0000791,3.31e-10,18;CL:0000789,3.31e-10,18;CL:0002420,3.31e-10,18;CL:0002419,3.31e-10,18;CL:0000790,3.31e-10,18;CL:0002032,4.46e-10,161;CL:0000837,4.46e-10,161;CL:0000236,6.68e-08,14;CL:0000945,1.64e-07,24;CL:0000826,1.64e-07,24;CL:0000084,1.72e-07,25;CL:0000827,1.72e-07,25;CL:0000625,1.82e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;3.99e-10;18!CL:0000051;7.27e-10;53!UBERON:0006601;5.29e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.33e-22!82;UBERON:0001049!1.55e-21!57;UBERON:0005068!1.55e-21!57;UBERON:0006241!1.55e-21!57;UBERON:0007135!1.55e-21!57;UBERON:0005743!1.82e-20!86;UBERON:0007023!1.65e-19!115;UBERON:0000073!2.69e-19!94;UBERON:0001016!2.69e-19!94;UBERON:0000955!2.89e-19!69;UBERON:0006238!2.89e-19!69;UBERON:0002616!1.05e-18!59;UBERON:0002780!1.99e-18!41;UBERON:0001890!1.99e-18!41;UBERON:0006240!1.99e-18!41;UBERON:0003080!4.16e-18!42;UBERON:0001893!3.38e-16!34;UBERON:0002020!5.99e-16!34;UBERON:0003528!5.99e-16!34;UBERON:0002791!1.40e-15!33;UBERON:0001869!2.17e-15!32;UBERON:0002619!1.17e-13!22;UBERON:0001950!1.17e-12!20;UBERON:0000956!6.35e-12!25;UBERON:0000203!6.35e-12!25;UBERON:0002346!3.15e-09!90;UBERON:0003075!3.55e-09!86;UBERON:0007284!3.55e-09!86;UBERON:0003056!6.61e-09!61;UBERON:0000153!2.57e-08!129;UBERON:0007811!2.57e-08!129;UBERON:0000033!2.34e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;5.89e-17;22!UBERON:0001893;1.39e-16;34!UBERON:0001869;1.84e-16;32!UBERON:0003528;3.13e-16;34!UBERON:0002020;3.13e-16;34!UBERON:0002791;3.81e-16;32!UBERON:0002780;9.27e-16;41!UBERON:0001890;9.27e-16;41!UBERON:0001950;1.19e-15;20!UBERON:0000073;5.81e-14;53!UBERON:0002616;5.81e-14;53!UBERON:0000956;9.66e-14;25!UBERON:0000203;9.66e-14;25!UBERON:0001017;1.35e-10;75!UBERON:0000955;4.27e-10;68!UBERON:0001016;1.46e-08;83!UBERON:0007023;6.88e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.36e-26,56;UBERON:0005068,5.36e-26,56;UBERON:0006241,5.36e-26,56;UBERON:0007135,5.36e-26,56;UBERON:0000073,8.19e-25,53;UBERON:0002616,8.19e-25,53;UBERON:0001017,3.90e-23,81;UBERON:0002780,6.02e-22,41;UBERON:0001890,6.02e-22,41;UBERON:0003080,6.02e-22,41;UBERON:0006240,6.02e-22,41;UBERON:0000955,5.07e-21,68;UBERON:0006238,5.07e-21,68;UBERON:0001016,7.94e-21,89;UBERON:0007023,1.19e-20,114;UBERON:0001893,1.77e-19,34;UBERON:0003528,3.64e-19,34;UBERON:0002020,3.64e-19,34;UBERON:0001869,1.98e-18,32;UBERON:0002791,4.20e-18,32;UBERON:0002619,3.17e-17,22;UBERON:0001950,6.30e-16,20;UBERON:0000956,5.67e-14,25;UBERON:0000203,5.67e-14,25;UBERON:0003075,1.08e-12,82;UBERON:0007284,1.08e-12,82;UBERON:0002346,6.17e-12,86;UBERON:0003056,3.97e-11,61;UBERON:0010371,1.59e-09,104;UBERON:0002390,5.54e-07,98;UBERON:0003061,5.54e-07,98;UBERON:0002193,6.38e-07,108;UBERON:0002420,9.30e-07,9;UBERON:0007245,9.30e-07,9;UBERON:0010009,9.30e-07,9;UBERON:0010011,9.30e-07,9;UBERON:0000454,9.30e-07,9 | |||
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| ||
|short_description=p2@HEATR5B | |||
}} | }} |
Latest revision as of 01:47, 17 September 2015
Short description: | p2@HEATR5B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HEATR5B_5end |
Coexpression cluster: | NA |
Association with transcript: | 41bp_to_ENST00000233099, ENST00000354531, ENST00000424416, NM_019024, uc002rpp.1_5end |
EntrezGene: | HEATR5B |
HGNC: | 29273 |
UniProt: | Q9P2D3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 8.30e-16 | 136 |
lymphocyte | 2.29e-15 | 53 |
common lymphoid progenitor | 2.29e-15 | 53 |
lymphoid lineage restricted progenitor cell | 8.83e-15 | 52 |
nongranular leukocyte | 1.26e-14 | 115 |
hematopoietic lineage restricted progenitor cell | 1.11e-13 | 120 |
hematopoietic stem cell | 7.34e-12 | 168 |
hematopoietic cell | 2.52e-10 | 177 |
mature alpha-beta T cell | 3.31e-10 | 18 |
alpha-beta T cell | 3.31e-10 | 18 |
immature T cell | 3.31e-10 | 18 |
mature T cell | 3.31e-10 | 18 |
immature alpha-beta T cell | 3.31e-10 | 18 |
hematopoietic oligopotent progenitor cell | 4.46e-10 | 161 |
hematopoietic multipotent progenitor cell | 4.46e-10 | 161 |
B cell | 6.68e-08 | 14 |
lymphocyte of B lineage | 1.64e-07 | 24 |
pro-B cell | 1.64e-07 | 24 |
T cell | 1.72e-07 | 25 |
pro-T cell | 1.72e-07 | 25 |
CD8-positive, alpha-beta T cell | 1.82e-07 | 11 |