FFCP PHASE1:Hg19::chr3:11314099..11314122,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:11314099..11314122,+
|short_description=p3@ATG7
|description=CAGE_peak_3_at_ATG7_5end
|association_with_transcript=0bp_to_ENST00000354449,ENST00000354956,E...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10533 | |EntrezGene=10533 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16935 | |HGNC=16935 | ||
|TSSclassifier=strong | |||
|UniProt=O95352,C9JNU2,E9PB95 | |UniProt=O95352,C9JNU2,E9PB95 | ||
|association_with_transcript=0bp_to_ENST00000354449,ENST00000354956,ENST00000419112,ENST00000446450_5end | |||
|cluster_id=chr3:11314099..11314122,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_3_at_ATG7_5end | |||
|id=chr3:11314099..11314122,+ | |||
|ontology_enrichment_celltype=CL:0000738!6.34e-49!140;CL:0000037!3.05e-41!172;CL:0000566!3.05e-41!172;CL:0002031!4.52e-40!124;CL:0002087!7.72e-40!119;CL:0000988!8.21e-38!182;CL:0002032!2.14e-37!165;CL:0000837!2.14e-37!165;CL:0000766!1.29e-30!76;CL:0000557!7.90e-27!71;CL:0002057!1.64e-26!42;CL:0002009!7.69e-26!65;CL:0000839!2.08e-25!70;CL:0000860!3.85e-25!45;CL:0002194!8.70e-25!63;CL:0000576!8.70e-25!63;CL:0000040!8.70e-25!63;CL:0000559!8.70e-25!63;CL:0000763!5.94e-23!112;CL:0000049!5.94e-23!112;CL:0000034!2.49e-15!444;CL:0000723!1.03e-14!436;CL:0000134!1.05e-14!358;CL:0000048!1.13e-14!430;CL:0000003!2.47e-13!722;CL:0002320!2.91e-13!365;CL:0000838!3.70e-13!52;CL:0000542!3.91e-13!53;CL:0000051!3.91e-13!53;CL:0000219!3.47e-12!390;CL:0000144!1.83e-08!625;CL:0000791!4.07e-08!18;CL:0000789!4.07e-08!18;CL:0002420!4.07e-08!18;CL:0002419!4.07e-08!18;CL:0000790!4.07e-08!18;CL:0002371!4.50e-07!591;CL:0000084!6.60e-07!25;CL:0000827!6.60e-07!25;CL:0000094!6.79e-07!8;CL:0002393!9.30e-07!9;CL:0002397!9.30e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.36e-32;33!CL:0002057;1.36e-32;33!CL:0000473;8.26e-29;39!CL:0000234;8.26e-29;39!CL:0000576;5.85e-28;48!CL:0000766;1.39e-23;69!CL:0002087;2.89e-18;104!CL:0000738;3.78e-15;136!CL:0000791;6.37e-14;18!CL:0000789;6.37e-14;18!CL:0002419;6.37e-14;18!CL:0000094;6.57e-11;8!CL:0000763;3.50e-10;100!CL:0000625;4.15e-10;11!CL:0000236;7.21e-10;13!CL:0000988;7.40e-10;177!CL:0000084;1.48e-09;25!CL:0000542;1.79e-09;53!CL:0000081;6.92e-09;11!CL:0002393;2.44e-08;6!CL:0002397;2.44e-08;6!CL:0000219;1.45e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.20e-73,136;CL:0002031,1.40e-60,120;CL:0002087,2.70e-60,115;CL:0000037,3.96e-58,168;CL:0000988,2.05e-54,177;CL:0000766,1.91e-53,72;CL:0002032,7.72e-52,161;CL:0000837,7.72e-52,161;CL:0000473,6.04e-47,48;CL:0000234,6.04e-47,48;CL:0000557,1.11e-46,67;CL:0002009,2.36e-45,61;CL:0000860,2.71e-45,42;CL:0002057,2.71e-45,42;CL:0002194,1.74e-43,59;CL:0000576,1.74e-43,59;CL:0000040,1.74e-43,59;CL:0000559,1.74e-43,59;CL:0000839,2.27e-43,66;CL:0000763,1.89e-34,108;CL:0000049,1.89e-34,108;CL:0000134,2.62e-18,354;CL:0002320,3.20e-17,361;CL:0000838,1.47e-15,52;CL:0000542,4.76e-15,53;CL:0000051,4.76e-15,53;CL:0000791,6.45e-14,18;CL:0000789,6.45e-14,18;CL:0002420,6.45e-14,18;CL:0002419,6.45e-14,18;CL:0000790,6.45e-14,18;CL:0000219,6.68e-14,386;CL:0000034,1.71e-13,441;CL:0000048,3.07e-13,427;CL:0000723,6.29e-13,433;CL:0000094,6.80e-11,8;CL:0002393,1.18e-10,9;CL:0002397,1.18e-10,9;CL:0000625,5.02e-10,11;CL:0000084,1.17e-09,25;CL:0000827,1.17e-09,25;CL:0000236,5.95e-09,14;CL:0000081,7.55e-09,11 | |||
|ontology_enrichment_development_v019=CL:0002057;2.94e-32;42!CL:0000790;6.37e-14;18!CL:0000051;1.79e-09;53!CL:0000049;1.80e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.75e-27!102;UBERON:0003061!3.75e-27!102;UBERON:0002193!7.10e-26!112;UBERON:0002371!8.73e-25!80;UBERON:0001474!1.10e-21!86;UBERON:0002405!4.36e-19!115;UBERON:0004765!2.95e-17!101;UBERON:0001434!2.95e-17!101;UBERON:0002384!1.12e-11!375;UBERON:0002204!1.00e-10!167;UBERON:0003081!2.89e-10!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.09e-47,98;UBERON:0003061,4.09e-47,98;UBERON:0002371,6.63e-43,76;UBERON:0002193,1.48e-42,108;UBERON:0001474,4.60e-38,82;UBERON:0002405,7.78e-37,93;UBERON:0004765,9.72e-34,90;UBERON:0001434,4.24e-28,100;UBERON:0003081,1.73e-20,203;UBERON:0002384,9.37e-16,371;UBERON:0002204,2.94e-14,167;UBERON:0000926,1.07e-07,315;UBERON:0004120,1.07e-07,315;UBERON:0006603,1.07e-07,315 | |||
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| ||
|short_description=p3@ATG7 | |||
}} | }} |
Latest revision as of 15:23, 19 September 2015
Short description: | p3@ATG7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ATG7_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000354449, ENST00000354956, ENST00000419112, ENST00000446450_5end |
EntrezGene: | ATG7 |
HGNC: | 16935 |
UniProt: | O95352C9JNU2E9PB95 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.09e-47 | 98 |
blood island | 4.09e-47 | 98 |
bone marrow | 6.63e-43 | 76 |
hemolymphoid system | 1.48e-42 | 108 |
bone element | 4.60e-38 | 82 |
immune system | 7.78e-37 | 93 |
skeletal element | 9.72e-34 | 90 |
skeletal system | 4.24e-28 | 100 |
lateral plate mesoderm | 1.73e-20 | 203 |
connective tissue | 9.37e-16 | 371 |
musculoskeletal system | 2.94e-14 | 167 |
mesoderm | 1.07e-07 | 315 |
mesoderm-derived structure | 1.07e-07 | 315 |
presumptive mesoderm | 1.07e-07 | 315 |