FFCP PHASE1:Hg19::chr3:133465228..133465244,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:133465228..133465244,+
|short_description=p1@TF
|description=CAGE_peak_1_at_TF_5end
|association_with_transcript=0bp_to_ENST00000264998,ENST00000414694,ENS...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7018 | |EntrezGene=7018 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11740 | |HGNC=11740 | ||
|TSSclassifier=strong | |||
|UniProt=P02787,F8WEK9,C9JVG0,F8WC57,F8WCI6 | |UniProt=P02787,F8WEK9,C9JVG0,F8WC57,F8WCI6 | ||
|association_with_transcript=0bp_to_ENST00000264998,ENST00000414694,ENST00000460531,ENST00000482271,ENST00000485977,ENST00000493011,ENST00000494430_5end | |||
|cluster_id=chr3:133465228..133465244,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_TF_5end | |||
|id=chr3:133465228..133465244,+ | |||
|ontology_enrichment_celltype=CL:0000181!1.23e-09!12;CL:0000417!1.23e-09!12;CL:0000668!1.23e-09!12;CL:0000414!1.23e-09!12;CL:0000412!1.23e-09!12;CL:0000182!1.23e-09!12;CL:0000136!2.43e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.71e-10;12!CL:0000136;6.80e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.53e-10,12 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.56e-18;82!UBERON:0004161;4.89e-11;11!UBERON:0009497;5.32e-09;13!UBERON:0003104;2.30e-08;31!UBERON:0002532;6.93e-07;206!UBERON:0010316;6.93e-07;206 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p1@TF | |||
}} | }} |
Latest revision as of 21:29, 24 September 2015
Short description: | p1@TF |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TF_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000264998, ENST00000414694, ENST00000460531, ENST00000482271, ENST00000485977, ENST00000493011, ENST00000494430_5end |
EntrezGene: | TF |
HGNC: | 11740 |
UniProt: | P02787F8WEK9C9JVG0F8WC57F8WCI6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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hepatocyte | 2.53e-10 | 12 |