FFCP PHASE1:Hg19::chr3:147657764..147657816,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:147657764..147657816,+
|short_description=p1@ENST00000467198,p1@ENST00000485006,p1@uc003ewf.1
|description=CAGE_peak_1_at_ENST00000467198_5end,CAGE_peak_1_a...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000467198,ENST00000485006,uc003ewf.1_5end | |||
|cluster_id=chr3:147657764..147657816,+ | |||
|coexpression_cluster_id=C808 | |||
|description=CAGE_peak_1_at_ENST00000467198_5end,CAGE_peak_1_at_ENST00000485006_5end,CAGE_peak_1_at_uc003ewf.1_5end | |||
|id=chr3:147657764..147657816,+ | |||
|ontology_enrichment_celltype=CL:0000128!5.35e-08!7;CL:0000126!5.35e-08!7;CL:0000127!5.35e-08!7;CL:0002453!5.35e-08!7 | |||
|ontology_enrichment_celltype_v019=CL:0000064;1.94e-07;3!CL:0000067;1.94e-07;3!CL:0005012;1.94e-07;3!CL:0002304;1.94e-07;3!CL:0002605;3.89e-07;3!CL:0000128;4.49e-07;7!CL:0000126;4.49e-07;7!CL:0000127;4.49e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,1.86e-07,3;CL:0000067,1.86e-07,3;CL:0005012,1.86e-07,3;CL:0002304,1.86e-07,3;CL:0002605,4.11e-07,3;CL:0000128,4.75e-07,7;CL:0000126,4.75e-07,7;CL:0000127,4.75e-07,7;CL:0002453,4.75e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.58e-15;82!UBERON:0006241;4.47e-08;3!UBERON:0003057;4.47e-08;3!UBERON:0006215;1.34e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.72e-69!82;UBERON:0005743!7.85e-69!86;UBERON:0002616!4.70e-63!59;UBERON:0001049!2.14e-62!57;UBERON:0005068!2.14e-62!57;UBERON:0006241!2.14e-62!57;UBERON:0007135!2.14e-62!57;UBERON:0000073!3.26e-62!94;UBERON:0001016!3.26e-62!94;UBERON:0000955!4.02e-60!69;UBERON:0006238!4.02e-60!69;UBERON:0003075!4.64e-60!86;UBERON:0007284!4.64e-60!86;UBERON:0002346!6.13e-58!90;UBERON:0002780!5.11e-45!41;UBERON:0001890!5.11e-45!41;UBERON:0006240!5.11e-45!41;UBERON:0003080!1.31e-43!42;UBERON:0004121!2.15e-43!169;UBERON:0000033!2.16e-43!123;UBERON:0000153!4.76e-43!129;UBERON:0007811!4.76e-43!129;UBERON:0000924!8.91e-43!173;UBERON:0006601!8.91e-43!173;UBERON:0003056!6.72e-40!61;UBERON:0002020!1.35e-39!34;UBERON:0003528!1.35e-39!34;UBERON:0001893!1.98e-39!34;UBERON:0002791!2.70e-38!33;UBERON:0001869!1.18e-36!32;UBERON:0000956!6.47e-28!25;UBERON:0000203!6.47e-28!25;UBERON:0007023!3.04e-26!115;UBERON:0002619!2.02e-24!22;UBERON:0001950!4.82e-22!20;UBERON:0003076!2.80e-19!15;UBERON:0003057!2.80e-19!15;UBERON:0000119!1.35e-18!312;UBERON:0000475!2.02e-18!365;UBERON:0000483!5.38e-17!309;UBERON:0004732!1.32e-16!13;UBERON:0004733!3.01e-15!12;UBERON:0002028!3.01e-15!12;UBERON:0007277!3.01e-15!12;UBERON:0000025!9.02e-15!194;UBERON:0002308!4.38e-13!9;UBERON:0000125!4.38e-13!9;UBERON:0002420!9.69e-13!9;UBERON:0007245!9.69e-13!9;UBERON:0010009!9.69e-13!9;UBERON:0010011!9.69e-13!9;UBERON:0000454!9.69e-13!9;UBERON:0000064!1.05e-12!219;UBERON:0000477!2.98e-12!286;UBERON:0000481!7.71e-12!347;UBERON:0002680!1.49e-11!9;UBERON:0001895!1.49e-11!9;UBERON:0010092!1.49e-11!9;UBERON:0009663!1.61e-10!7;UBERON:0004111!6.21e-10!241;UBERON:0002298!5.38e-09!8;UBERON:0000200!2.27e-08!6;UBERON:0002200!2.49e-08!11;UBERON:0006876!2.49e-08!11;UBERON:0000922!3.20e-08!612;UBERON:0001871!3.50e-08!7;UBERON:0002037!8.68e-08!6;UBERON:0006215!8.68e-08!6;UBERON:0000349!2.15e-07!5;UBERON:0000468!2.59e-07!659;UBERON:0001872!4.48e-07!5;UBERON:0001894!5.21e-07!7;UBERON:0006222!5.21e-07!7;UBERON:0002021!6.76e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;3.73e-53;34!UBERON:0003528;6.36e-53;34!UBERON:0002020;6.36e-53;34!UBERON:0002791;2.84e-52;32!UBERON:0001869;7.12e-52;32!UBERON:0000073;2.19e-49;53!UBERON:0002616;2.19e-49;53!UBERON:0002780;9.58e-48;41!UBERON:0001890;9.58e-48;41!UBERON:0000956;1.46e-43;25!UBERON:0000203;1.46e-43;25!UBERON:0002619;5.48e-38;22!UBERON:0001017;6.29e-37;75!UBERON:0000955;1.54e-34;68!UBERON:0001950;3.35e-34;20!UBERON:0001016;1.48e-30;83!UBERON:0004732;2.55e-22;13!UBERON:0004733;3.34e-20;12!UBERON:0002028;3.34e-20;12!UBERON:0000125;9.19e-20;9!UBERON:0002308;9.19e-20;9!UBERON:0002420;3.22e-19;9!UBERON:0007245;3.22e-19;9!UBERON:0010009;3.22e-19;9!UBERON:0010011;3.22e-19;9!UBERON:0000454;3.22e-19;9!UBERON:0009663;1.05e-15;7!UBERON:0002680;1.97e-14;9!UBERON:0001895;1.97e-14;9!UBERON:0002298;1.69e-13;6!UBERON:0000200;2.61e-12;6!UBERON:0007023;2.73e-11;114!UBERON:0011216;3.16e-11;132!UBERON:0000349;8.39e-11;5!UBERON:0001871;1.91e-10;6!UBERON:0001872;2.98e-10;5!UBERON:0002021;6.40e-10;5!UBERON:0010314;1.14e-09;132!UBERON:0000369;3.89e-09;4!UBERON:0002435;3.89e-09;4!UBERON:0000204;3.89e-09;4!UBERON:0002784;4.61e-09;4!UBERON:0000488;6.00e-09;4!UBERON:0002037;1.12e-08;6!UBERON:0006876;2.88e-08;11!UBERON:0002240;4.47e-08;3!UBERON:0005174;4.47e-08;3!UBERON:0001137;4.47e-08;3!UBERON:0001894;7.91e-08;7!UBERON:0000988;1.25e-07;3!UBERON:0001896;1.56e-07;3!UBERON:0005290;1.56e-07;3!UBERON:0001778;1.94e-07;3!UBERON:0001775;1.94e-07;3!UBERON:0005383;2.80e-07;3!UBERON:0005382;2.80e-07;3!UBERON:0004121;3.57e-07;165!UBERON:0001870;5.28e-07;3!UBERON:0001032;8.07e-07;24!UBERON:0004456;8.07e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.03e-94,56;UBERON:0005068,1.03e-94,56;UBERON:0006241,1.03e-94,56;UBERON:0007135,1.03e-94,56;UBERON:0001017,1.72e-91,81;UBERON:0000073,6.47e-88,53;UBERON:0002616,6.47e-88,53;UBERON:0001016,6.33e-84,89;UBERON:0003075,8.95e-83,82;UBERON:0007284,8.95e-83,82;UBERON:0000955,6.48e-82,68;UBERON:0006238,6.48e-82,68;UBERON:0002346,3.76e-78,86;UBERON:0002780,7.35e-68,41;UBERON:0001890,7.35e-68,41;UBERON:0003080,7.35e-68,41;UBERON:0006240,7.35e-68,41;UBERON:0010371,2.02e-66,104;UBERON:0003056,2.50e-64,61;UBERON:0003528,3.35e-62,34;UBERON:0002020,3.35e-62,34;UBERON:0001893,6.20e-62,34;UBERON:0002791,5.41e-58,32;UBERON:0001869,1.62e-57,32;UBERON:0010314,9.22e-53,132;UBERON:0004121,1.21e-51,171;UBERON:0000924,1.21e-51,171;UBERON:0006601,1.21e-51,171;UBERON:0000956,1.28e-43,25;UBERON:0000203,1.28e-43,25;UBERON:0002619,4.61e-38,22;UBERON:0007023,7.86e-36,114;UBERON:0001950,2.77e-34,20;UBERON:0011216,6.20e-29,223;UBERON:0003076,1.53e-26,15;UBERON:0003057,1.53e-26,15;UBERON:0004732,2.38e-22,13;UBERON:0004733,3.12e-20,12;UBERON:0002028,3.12e-20,12;UBERON:0007277,3.12e-20,12;UBERON:0000125,9.00e-20,9;UBERON:0002308,9.00e-20,9;UBERON:0002420,3.16e-19,9;UBERON:0007245,3.16e-19,9;UBERON:0010009,3.16e-19,9;UBERON:0010011,3.16e-19,9;UBERON:0000454,3.16e-19,9;UBERON:0000025,3.80e-18,192;UBERON:0000119,1.05e-17,309;UBERON:0000483,9.90e-16,306;UBERON:0009663,1.03e-15,7;UBERON:0002680,1.85e-14,9;UBERON:0001895,1.85e-14,9;UBERON:0010092,1.85e-14,9;UBERON:0002298,1.59e-13,6;UBERON:0004111,2.01e-12,240;UBERON:0000200,2.53e-12,6;UBERON:0000349,8.76e-11,5;UBERON:0001871,1.94e-10,6;UBERON:0001872,2.78e-10,5;UBERON:0002021,5.29e-10,5;UBERON:0000369,3.81e-09,4;UBERON:0002435,3.81e-09,4;UBERON:0000204,3.81e-09,4;UBERON:0010082,3.81e-09,4;UBERON:0002784,4.81e-09,4;UBERON:0000488,6.32e-09,4;UBERON:0002037,1.11e-08,6;UBERON:0006215,1.11e-08,6;UBERON:0006876,2.86e-08,11;UBERON:0002240,4.48e-08,3;UBERON:0005174,4.48e-08,3;UBERON:0001137,4.48e-08,3;UBERON:0001894,8.15e-08,7;UBERON:0006222,8.15e-08,7;UBERON:0000988,1.17e-07,3;UBERON:0001896,1.56e-07,3;UBERON:0005290,1.56e-07,3;UBERON:0010096,1.56e-07,3;UBERON:0001778,1.86e-07,3;UBERON:0001775,1.86e-07,3;UBERON:0005383,2.68e-07,3;UBERON:0005382,2.68e-07,3;UBERON:0000922,3.09e-07,592;UBERON:0001870,5.17e-07,3;UBERON:0000923,7.42e-07,560;UBERON:0010316,7.42e-07,560;UBERON:0005291,7.42e-07,560;UBERON:0006598,7.42e-07,560;UBERON:0010317,7.42e-07,560;UBERON:0002532,7.42e-07,560;UBERON:0000020,8.25e-07,24;UBERON:0001032,8.25e-07,24;UBERON:0004456,8.25e-07,24 | |||
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|short_description=p1@ENST00000467198,p1@ENST00000485006,p1@uc003ewf.1 | |||
}} | }} |
Latest revision as of 16:47, 29 July 2015
Short description: | p1@ENST00000467198, p1@ENST00000485006, p1@uc003ewf.1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000467198_5end, CAGE_peak_1_at_ENST00000485006_5end, CAGE_peak_1_at_uc003ewf.1_5end |
Coexpression cluster: | C808_Neural_spinal_cerebral_hippocampus_cerebellum_duodenum_corpus |
Association with transcript: | 0bp_to_ENST00000467198, ENST00000485006, uc003ewf.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 1.86e-07 | 3 |
ciliated epithelial cell | 1.86e-07 | 3 |
multi-ciliated epithelial cell | 1.86e-07 | 3 |
non-pigmented ciliary epithelial cell | 1.86e-07 | 3 |
astrocyte of the cerebral cortex | 4.11e-07 | 3 |
oligodendrocyte | 4.75e-07 | 7 |
macroglial cell | 4.75e-07 | 7 |
astrocyte | 4.75e-07 | 7 |
oligodendrocyte precursor cell | 4.75e-07 | 7 |