FFCP PHASE1:Hg19::chr11:134146239..134146287,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=112937 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25147 | |||
|TSSclassifier=strong | |||
|UniProt=Q8NCI6 | |||
|association_with_transcript=0bp_to_NM_001080407,uc009zdf.2,uc010scs.1_5end | |||
|cluster_id=chr11:134146239..134146287,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_GLB1L3_5end | |||
|id=chr11:134146239..134146287,+ | |||
|ontology_enrichment_celltype=CL:0002159!7.35e-11!13;CL:0002077!2.58e-08!33;CL:0002368!3.06e-08!13;CL:0000240!5.89e-07!6;CL:0000311!5.89e-07!6;CL:0000079!5.89e-07!6;CL:0000237!5.89e-07!6;CL:0000036!5.89e-07!6;CL:0000357!5.89e-07!6;CL:0000114!5.89e-07!6;CL:0000221!6.07e-07!71;CL:0000362!6.79e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002368;2.59e-14;13!CL:0002322;2.07e-10;5!CL:0000312;2.41e-10;5!CL:0000240;1.51e-08;6!CL:0000311;1.51e-08;6!CL:0000079;1.51e-08;6!CL:0000237;1.51e-08;6!CL:0002159;3.84e-08;14!CL:0002202;4.55e-08;9!CL:0002632;4.55e-08;9!CL:0000362;7.56e-08;9!CL:0002321;1.10e-07;15!CL:0000307;4.21e-07;3!CL:0002328;4.49e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,1.95e-14,13;CL:0002322,1.95e-10,5;CL:0000312,3.11e-10,5;CL:0000240,1.86e-08,6;CL:0000311,1.86e-08,6;CL:0000079,1.86e-08,6;CL:0000237,1.86e-08,6;CL:0000036,1.86e-08,6;CL:0000357,1.86e-08,6;CL:0000114,1.86e-08,6;CL:0002202,4.22e-08,9;CL:0002632,4.22e-08,9;CL:0002159,4.68e-08,14;CL:0000221,8.29e-08,72;CL:0000362,9.68e-08,9;CL:0000068,3.80e-07,3;CL:0000069,3.80e-07,3;CL:0000307,3.80e-07,3;CL:0000377,3.80e-07,3;CL:0002328,4.40e-07,3;CL:0002077,5.80e-07,34 | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.11e-10;82!CL:0000357;1.51e-08;6!CL:0000114;1.51e-08;6!UBERON:0006215;3.50e-08;3!CL:0000377;4.21e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.82e-36!57;UBERON:0005068!2.82e-36!57;UBERON:0006241!2.82e-36!57;UBERON:0007135!2.82e-36!57;UBERON:0002346!8.73e-33!90;UBERON:0000073!2.29e-32!94;UBERON:0001016!2.29e-32!94;UBERON:0000924!3.85e-32!173;UBERON:0006601!3.85e-32!173;UBERON:0002780!2.60e-31!41;UBERON:0001890!2.60e-31!41;UBERON:0006240!2.60e-31!41;UBERON:0001017!4.48e-31!82;UBERON:0003080!3.04e-30!42;UBERON:0003075!5.43e-30!86;UBERON:0007284!5.43e-30!86;UBERON:0005743!5.46e-30!86;UBERON:0002616!8.53e-30!59;UBERON:0004121!1.15e-29!169;UBERON:0001893!1.38e-27!34;UBERON:0007023!2.10e-27!115;UBERON:0002020!3.14e-27!34;UBERON:0003528!3.14e-27!34;UBERON:0000955!1.21e-26!69;UBERON:0006238!1.21e-26!69;UBERON:0001869!1.31e-26!32;UBERON:0002791!1.84e-26!33;UBERON:0003056!1.04e-24!61;UBERON:0000033!1.21e-23!123;UBERON:0000153!3.16e-23!129;UBERON:0007811!3.16e-23!129;UBERON:0002619!1.62e-22!22;UBERON:0001950!9.75e-21!20;UBERON:0000956!6.21e-19!25;UBERON:0000203!6.21e-19!25;UBERON:0002420!1.20e-10!9;UBERON:0007245!1.20e-10!9;UBERON:0010009!1.20e-10!9;UBERON:0010011!1.20e-10!9;UBERON:0000454!1.20e-10!9;UBERON:0002308!7.61e-10!9;UBERON:0000125!7.61e-10!9;UBERON:0009663!1.27e-08!7;UBERON:0000200!2.35e-08!6;UBERON:0003076!1.95e-07!15;UBERON:0003057!1.95e-07!15;UBERON:0000475!2.58e-07!365;UBERON:0001871!3.25e-07!7;UBERON:0001872!8.32e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.84e-40;32!UBERON:0002791;1.57e-37;32!UBERON:0002619;7.72e-37;22!UBERON:0003528;1.03e-36;34!UBERON:0002020;1.03e-36;34!UBERON:0001893;1.98e-36;34!UBERON:0001950;1.21e-33;20!UBERON:0002780;5.68e-32;41!UBERON:0001890;5.68e-32;41!UBERON:0000956;7.82e-32;25!UBERON:0000203;7.82e-32;25!UBERON:0000073;1.03e-28;53!UBERON:0002616;1.03e-28;53!UBERON:0000955;1.62e-19;68!UBERON:0001017;3.46e-17;75!UBERON:0001016;4.32e-16;83!UBERON:0002420;4.31e-15;9!UBERON:0007245;4.31e-15;9!UBERON:0010009;4.31e-15;9!UBERON:0010011;4.31e-15;9!UBERON:0000454;4.31e-15;9!UBERON:0000200;1.02e-13;6!UBERON:0009663;1.26e-11;7!UBERON:0000125;1.68e-11;9!UBERON:0002308;1.68e-11;9!UBERON:0001872;4.74e-11;5!UBERON:0002021;1.29e-10;5!UBERON:0000369;1.75e-10;4!UBERON:0002435;1.75e-10;4!UBERON:0000204;1.75e-10;4!UBERON:0000349;1.83e-10;5!UBERON:0005383;2.81e-08;3!UBERON:0005382;2.81e-08;3!UBERON:0004733;4.99e-08;12!UBERON:0002028;4.99e-08;12!UBERON:0001870;7.45e-08;3!UBERON:0001871;8.14e-08;6!UBERON:0007023;2.38e-07;114!UBERON:0004732;2.56e-07;13!UBERON:0004815;4.49e-07;3!UBERON:0002031;4.49e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.59e-50,53;UBERON:0002616,1.59e-50,53;UBERON:0001049,3.20e-47,56;UBERON:0005068,3.20e-47,56;UBERON:0006241,3.20e-47,56;UBERON:0007135,3.20e-47,56;UBERON:0001016,4.04e-46,89;UBERON:0001869,3.48e-45,32;UBERON:0002780,4.00e-44,41;UBERON:0001890,4.00e-44,41;UBERON:0003080,4.00e-44,41;UBERON:0006240,4.00e-44,41;UBERON:0001893,4.35e-42,34;UBERON:0002791,1.32e-41,32;UBERON:0003528,1.42e-41,34;UBERON:0002020,1.42e-41,34;UBERON:0001017,6.19e-41,81;UBERON:0000955,7.82e-41,68;UBERON:0006238,7.82e-41,68;UBERON:0002619,1.71e-36,22;UBERON:0010371,2.40e-35,104;UBERON:0002346,2.08e-33,86;UBERON:0001950,2.56e-33,20;UBERON:0004121,2.33e-32,171;UBERON:0000924,2.33e-32,171;UBERON:0006601,2.33e-32,171;UBERON:0000956,1.56e-31,25;UBERON:0000203,1.56e-31,25;UBERON:0003075,1.91e-30,82;UBERON:0007284,1.91e-30,82;UBERON:0003056,1.22e-28,61;UBERON:0007023,1.62e-20,114;UBERON:0011216,2.60e-18,223;UBERON:0010314,1.01e-17,132;UBERON:0002420,4.50e-15,9;UBERON:0007245,4.50e-15,9;UBERON:0010009,4.50e-15,9;UBERON:0010011,4.50e-15,9;UBERON:0000454,4.50e-15,9;UBERON:0000200,1.23e-13,6;UBERON:0009663,1.64e-11,7;UBERON:0000125,2.43e-11,9;UBERON:0002308,2.43e-11,9;UBERON:0001872,6.80e-11,5;UBERON:0000349,1.46e-10,5;UBERON:0000369,1.72e-10,4;UBERON:0002435,1.72e-10,4;UBERON:0000204,1.72e-10,4;UBERON:0010082,1.72e-10,4;UBERON:0002021,1.87e-10,5;UBERON:0000025,8.70e-09,192;UBERON:0005383,2.82e-08,3;UBERON:0005382,2.82e-08,3;UBERON:0004733,5.18e-08,12;UBERON:0002028,5.18e-08,12;UBERON:0007277,5.18e-08,12;UBERON:0001871,7.53e-08,6;UBERON:0001870,9.12e-08,3;UBERON:0004732,2.65e-07,13;UBERON:0004815,4.40e-07,3;UBERON:0002031,4.40e-07,3;UBERON:0000922,9.45e-07,592 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.59710612239464,4.2168828628955,3.69754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786021525498329,0,0,0,0,0,0.111410456885174,0,0.443067789167242,0,0.512365278902701,0.130059347559878,0.328875809207352,0.276350017785848,0,0,0,0,1.47302145506836,0.383220493601921,0.34362744548263,0.253019692019503,0,0,0.950452044448374,0,0,0,0.236777252044017,0,0.80642697289893,0.534880391567015,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.087834785693126,1.30979075497713,3.27865759463288,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48875241714027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,2.45471508531751,1.72082757233402,4.14710600840624,5.03613119621644,2.32387885739037,1.86589899027667,4.54177531576131,4.37972830890996,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,2.52425656439839,2.24803506515239,1.10581869652794,0.370353780634118,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0.93733833986777,0.839910640994298,1.41775097242386,0.626909658919938,0.581267877027924,0,0,0,0,0,0.25248486685276,1.0159663086747,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0.431255149719035,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391602314925481,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601519410909855,0.184161977871793,0,0,0.131124414959424,0,0.15403067420883,0,0,0.105551628892876,0,0,0.215915916102139,0,0.270946437543853,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,4.01985876597321,0.650060246036521,0,0,0,0,0,0,0,0,0,2.80984356113663,2.49847087574638,6.89108647470754,1.6185244936888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.59799704358883,4.69211592875051,5.44454924306613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.49303481825465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0.111443384277478,0,0,0,0,4.97073823883149,2.95405774462077,0,1.31843099381408,2.32237948940793,0.19924798825107,0.552567831062295,0,0,0,0,0,0,0,0.0986434056369336,0,0,4.84666373047609,5.93715828235848,0,0,0,0,7.85174793169948,0,0,1.72371686620732,0.291604613383254,5.72962483279864,10.6288966297661,9.76831152865804,10.6807215421958,11.2790845129849,7.97978571174578,4.60709334023342,0,0,0.538651809526579,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889563386041866,1.48276726735803,1.8795950910982,0.337005664903385,0,3.27970224015475,0,0.19566461893209,0,0,0,0.30607276163049,0.126373159256976,1.80388103297391,1.24425829676697,0,0,0.313932918407225,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,8.16709267830835,1.36885967914362,0,0,0.19980960958213,0,0,0,0.14405479798815,1.86378803348149,0,0,0,0,0,4.20294202096853,1.09524303113594,0,0,0.525774708558629,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,2.38568906942791,1.36203406111576,8.359163720181,5.91419577368105,6.23160507043778,0,0,7.53294502559506,0,0.551639951094387,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,1.16354660725395,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.08854543973589,5.49118192058834,5.00763722825999,0,2.3295100822739,1.55241007353459,0,0,0,0,0,9.36669811613763,3.91286777249228,0,0,0,0.189403005275089,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0,0,0.353378291891762,0,0,0,0,0,5.25382057376577,0,0,0,0,0,0,0.39997479170986,0,0,0,0,1.81843360035278,0,5.62735233736067,1.83302179374359,0,5.56969154779271,1.3578602396322,1.2754495206101,0.123935764259002,0,0,0,0,0,0,10.7905098162052,4.25089728976755,2.87340946302872,4.1023272848151,1.00828678488687,9.75117259745472,4.84426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.82129604645786,3.12431239445539,6.40729069153671,7.16598655191147,1.09394961803644,0,0,1.23109871051734,0,0,0.336283722218824,1.21393120847326,1.13831095675649,0,0,0,5.16569970623921,7.69541450685334,0,0.111231401892069,0.941917114206168,19.4823331495842,0,0,0,0,0.857718530119876,0.158013611732727,0,0,0,0.207216164163037,0,0,0.430227358820278,7.57324804675618,7.75441983308335,0.846774100381858,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.981542335574726,0.594092800654172,0.4226557275834,0,0,0,0,0,0,0,0,0.458729283404541,0.143339583151451,0.315543124386369,7.07111497985513,0.436350690340377,0.5290268405154,0,0,0,0,0.109265571963696,0,0.917899467677836,3.47382626845229,0.551369397209069,0.50141507858475,0.227336094654718,0.267964130156178,0.829169439458779,1.44806194206653,0,0,0,0.372448285775147,0,0.509177266225319,0,0.435433495793923,0,0.0673520530145875,1.07583308089015,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p1@GLB1L3 | |||
}} |
Latest revision as of 20:35, 16 September 2015
Short description: | p1@GLB1L3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GLB1L3_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_NM_001080407, uc009zdf.2, uc010scs.1_5end |
EntrezGene: | GLB1L3 |
HGNC: | 25147 |
UniProt: | Q8NCI6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 1.95e-14 | 13 |
embryonic stem cell | 1.95e-10 | 5 |
keratinocyte | 3.11e-10 | 5 |
stratified squamous epithelial cell | 1.86e-08 | 6 |
keratin accumulating cell | 1.86e-08 | 6 |
stratified epithelial cell | 1.86e-08 | 6 |
keratinizing barrier epithelial cell | 1.86e-08 | 6 |
epithelial fate stem cell | 1.86e-08 | 6 |
stratified epithelial stem cell | 1.86e-08 | 6 |
surface ectodermal cell | 1.86e-08 | 6 |
epithelial cell of tracheobronchial tree | 4.22e-08 | 9 |
epithelial cell of lower respiratory tract | 4.22e-08 | 9 |
general ecto-epithelial cell | 4.68e-08 | 14 |
ectodermal cell | 8.29e-08 | 72 |
epidermal cell | 9.68e-08 | 9 |
duct epithelial cell | 3.80e-07 | 3 |
branched duct epithelial cell | 3.80e-07 | 3 |
tracheal epithelial cell | 3.80e-07 | 3 |
tracheoblast | 3.80e-07 | 3 |
bronchial epithelial cell | 4.40e-07 | 3 |
ecto-epithelial cell | 5.80e-07 | 34 |