FFCP PHASE1:Hg19::chr1:109792151..109792170,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1952 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3231 | |||
|TSSclassifier=strong | |||
|UniProt=Q9HCU4 | |||
|association_with_transcript=-470bp_to_ENST00000271332,NM_001408,uc001dxa.3_5end | |||
|cluster_id=chr1:109792151..109792170,+ | |||
|coexpression_cluster_id=C3844 | |||
|description=CAGE_peak_1_at_CELSR2_5end | |||
|id=chr1:109792151..109792170,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.91e-15!254;CL:0000221!5.46e-09!71;CL:0002076!7.22e-09!43;CL:0000133!3.80e-08!59;CL:0000223!2.76e-07!59;CL:0002319!5.01e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.27e-07;42!CL:0002319;2.63e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.35e-14,253;CL:0002076,3.64e-10,42;CL:0000221,6.37e-10,72;CL:0000133,4.64e-09,59;CL:0000223,2.89e-08,58;CL:0002319,2.62e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.84e-12;82 | |||
|ontology_enrichment_disease=DOID:0050687!3.85e-12!143;DOID:305!4.94e-11!106;DOID:162!1.14e-07!235;DOID:14566!5.14e-07!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.20e-11,106;DOID:0050687,4.40e-11,143 | |||
|ontology_enrichment_uberon=UBERON:0000924!8.32e-38!173;UBERON:0006601!8.32e-38!173;UBERON:0004121!3.49e-36!169;UBERON:0005743!3.40e-35!86;UBERON:0000073!4.05e-35!94;UBERON:0001016!4.05e-35!94;UBERON:0001017!2.16e-34!82;UBERON:0001049!1.57e-30!57;UBERON:0005068!1.57e-30!57;UBERON:0006241!1.57e-30!57;UBERON:0007135!1.57e-30!57;UBERON:0000955!2.69e-29!69;UBERON:0006238!2.69e-29!69;UBERON:0002346!1.58e-28!90;UBERON:0000153!3.57e-28!129;UBERON:0007811!3.57e-28!129;UBERON:0000033!3.87e-28!123;UBERON:0003075!5.06e-27!86;UBERON:0007284!5.06e-27!86;UBERON:0002616!7.72e-26!59;UBERON:0002780!7.87e-24!41;UBERON:0001890!7.87e-24!41;UBERON:0006240!7.87e-24!41;UBERON:0003080!1.90e-23!42;UBERON:0007023!6.68e-23!115;UBERON:0001893!2.04e-22!34;UBERON:0002020!4.03e-22!34;UBERON:0003528!4.03e-22!34;UBERON:0003056!7.14e-22!61;UBERON:0002791!9.83e-22!33;UBERON:0001869!3.32e-21!32;UBERON:0000956!4.02e-17!25;UBERON:0000203!4.02e-17!25;UBERON:0002619!1.69e-15!22;UBERON:0000064!5.03e-15!219;UBERON:0001950!3.46e-14!20;UBERON:0000062!9.20e-13!511;UBERON:0000475!1.02e-09!365;UBERON:0003076!3.35e-08!15;UBERON:0003057!3.35e-08!15;UBERON:0000922!5.36e-08!612;UBERON:0000481!6.68e-08!347;UBERON:0004732!2.33e-07!13;UBERON:0000477!7.25e-07!286;UBERON:0002050!8.80e-07!605;UBERON:0005423!8.80e-07!605;UBERON:0002420!9.74e-07!9;UBERON:0007245!9.74e-07!9;UBERON:0010009!9.74e-07!9;UBERON:0010011!9.74e-07!9;UBERON:0000454!9.74e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.13e-21;34!UBERON:0001869;2.71e-21;32!UBERON:0002791;3.42e-21;32!UBERON:0003528;4.62e-21;34!UBERON:0002020;4.62e-21;34!UBERON:0002780;5.09e-19;41!UBERON:0001890;5.09e-19;41!UBERON:0000956;7.99e-19;25!UBERON:0000203;7.99e-19;25!UBERON:0000073;2.44e-18;53!UBERON:0002616;2.44e-18;53!UBERON:0002619;5.11e-17;22!UBERON:0001950;1.48e-15;20!UBERON:0001017;2.48e-14;75!UBERON:0000955;4.43e-14;68!UBERON:0001016;2.91e-13;83!UBERON:0004732;4.66e-08;13!UBERON:0007023;1.29e-07;114!UBERON:0004733;2.40e-07;12!UBERON:0002028;2.40e-07;12!UBERON:0002420;2.51e-07;9!UBERON:0007245;2.51e-07;9!UBERON:0010009;2.51e-07;9!UBERON:0010011;2.51e-07;9!UBERON:0000454;2.51e-07;9!UBERON:0000125;5.33e-07;9!UBERON:0002308;5.33e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.01e-39,171;UBERON:0000924,2.01e-39,171;UBERON:0006601,2.01e-39,171;UBERON:0001017,1.72e-37,81;UBERON:0001016,2.68e-37,89;UBERON:0001049,4.11e-34,56;UBERON:0005068,4.11e-34,56;UBERON:0006241,4.11e-34,56;UBERON:0007135,4.11e-34,56;UBERON:0000073,2.46e-32,53;UBERON:0002616,2.46e-32,53;UBERON:0000955,7.63e-32,68;UBERON:0006238,7.63e-32,68;UBERON:0002346,9.01e-31,86;UBERON:0010371,3.05e-30,104;UBERON:0003075,4.14e-29,82;UBERON:0007284,4.14e-29,82;UBERON:0002780,2.86e-26,41;UBERON:0001890,2.86e-26,41;UBERON:0003080,2.86e-26,41;UBERON:0006240,2.86e-26,41;UBERON:0011216,9.11e-26,223;UBERON:0001893,1.06e-24,34;UBERON:0003528,2.26e-24,34;UBERON:0002020,2.26e-24,34;UBERON:0007023,3.23e-24,114;UBERON:0003056,4.37e-24,61;UBERON:0001869,2.35e-23,32;UBERON:0002791,3.03e-23,32;UBERON:0000956,8.00e-19,25;UBERON:0000203,8.00e-19,25;UBERON:0002619,5.09e-17,22;UBERON:0010314,1.37e-16,132;UBERON:0001950,1.45e-15,20;UBERON:0000922,6.49e-10,592;UBERON:0003076,6.28e-09,15;UBERON:0003057,6.28e-09,15;UBERON:0004732,5.38e-08,13;UBERON:0005423,7.51e-08,581;UBERON:0004111,7.99e-08,240;UBERON:0002420,2.63e-07,9;UBERON:0007245,2.63e-07,9;UBERON:0010009,2.63e-07,9;UBERON:0010011,2.63e-07,9;UBERON:0000454,2.63e-07,9;UBERON:0004733,2.75e-07,12;UBERON:0002028,2.75e-07,12;UBERON:0007277,2.75e-07,12;UBERON:0000125,5.41e-07,9;UBERON:0002308,5.41e-07,9 | |||
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| |||
|short_description=p1@CELSR2 | |||
}} |
Latest revision as of 21:09, 15 September 2015
Short description: | p1@CELSR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CELSR2_5end |
Coexpression cluster: | C3844_MCF7_cervical_occipital_temporal_postcentral_brain_parietal |
Association with transcript: | -470bp_to_ENST00000271332, NM_001408, uc001dxa.3_5end |
EntrezGene: | CELSR2 |
HGNC: | 3231 |
UniProt: | Q9HCU4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.35e-14 | 253 |
endo-epithelial cell | 3.64e-10 | 42 |
ectodermal cell | 6.37e-10 | 72 |
neurectodermal cell | 4.64e-09 | 59 |
endodermal cell | 2.89e-08 | 58 |
neural cell | 2.62e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.20e-11 | 106 |
cell type cancer | 4.40e-11 | 143 |