FFCP PHASE1:Mm9::chr10:59595641..59595663,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:59595641..59595663,+|id=chr10:59595641..59595663,+|ontology_enrichment_celltype=CL:0000117!6.14e-15!23;CL:0000337!6.14e-15!23;CL:0000540!9.42e-10!33;CL:0000047!9.42e-10!33;CL:0000031!9.42e-10!33;CL:0000404!9.42e-10!33;CL:0000393!2.74e-07!39;CL:0000211!2.74e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,6.79e-18,23;CL:0000337,6.79e-18,23;CL:0000540,3.60e-11,33;CL:0000047,3.60e-11,33;CL:0000031,3.60e-11,33;CL:0000404,3.60e-11,33;CL:0000393,8.05e-09,39;CL:0000211,8.05e-09,39;CL:0002319,1.25e-07,43;CL:0000221,2.28e-07,44;CL:0000133,2.28e-07,44;CL:0002610,2.76e-07,3;CL:0002614,3.31e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.60e-23!52;UBERON:0005068!2.60e-23!52;UBERON:0006241!2.60e-23!52;UBERON:0007135!2.60e-23!52;UBERON:0002346!3.60e-23!71;UBERON:0003075!3.60e-23!71;UBERON:0007284!3.60e-23!71;UBERON:0000955!4.67e-22!50;UBERON:0006238!4.67e-22!50;UBERON:0001017!1.91e-21!73;UBERON:0005743!1.91e-21!73;UBERON:0002616!2.28e-21!49;UBERON:0000073!9.87e-21!75;UBERON:0001016!9.87e-21!75;UBERON:0000033!4.15e-20!63;UBERON:0002020!4.96e-20!34;UBERON:0004121!9.67e-19!102;UBERON:0000924!9.67e-19!102;UBERON:0006601!9.67e-19!102;UBERON:0003056!5.12e-18!49;UBERON:0003080!8.38e-18!40;UBERON:0002780!4.23e-17!39;UBERON:0001890!4.23e-17!39;UBERON:0006240!4.23e-17!39;UBERON:0002791!2.07e-16!29;UBERON:0003528!2.07e-16!29;UBERON:0001893!2.07e-16!29;UBERON:0007811!8.85e-15!86;UBERON:0000153!1.13e-12!94;UBERON:0000956!9.00e-11!21;UBERON:0001869!9.00e-11!21;UBERON:0000203!9.00e-11!21;UBERON:0000025!1.25e-10!114;UBERON:0004111!7.02e-10!122;UBERON:0002619!3.77e-09!17;UBERON:0002021!5.36e-08!10;UBERON:0000411!5.36e-08!10;UBERON:0001950!5.36e-08!10;UBERON:0002420!4.83e-07!8;UBERON:0007245!4.83e-07!8;UBERON:0010009!4.83e-07!8;UBERON:0010011!4.83e-07!8;UBERON:0000454!4.83e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.43e-44,54;UBERON:0001049,1.12e-40,52;UBERON:0005068,1.12e-40,52;UBERON:0006241,1.12e-40,52;UBERON:0007135,1.12e-40,52;UBERON:0001017,2.88e-38,73;UBERON:0001016,5.74e-37,75;UBERON:0000955,1.55e-32,47;UBERON:0006238,1.55e-32,47;UBERON:0002346,2.98e-31,64;UBERON:0003075,2.98e-31,64;UBERON:0007284,2.98e-31,64;UBERON:0002616,4.27e-31,46;UBERON:0002020,5.91e-31,34;UBERON:0004121,5.59e-27,95;UBERON:0000924,5.59e-27,95;UBERON:0006601,5.59e-27,95;UBERON:0003080,6.35e-27,40;UBERON:0010371,3.21e-26,73;UBERON:0002780,1.87e-25,39;UBERON:0001890,1.87e-25,39;UBERON:0006240,1.87e-25,39;UBERON:0003528,3.23e-23,29;UBERON:0002791,3.23e-23,29;UBERON:0001893,3.23e-23,29;UBERON:0003056,1.25e-20,49;UBERON:0010314,7.68e-19,92;UBERON:0000025,1.46e-17,114;UBERON:0002021,1.57e-16,10;UBERON:0000411,1.57e-16,10;UBERON:0001950,1.57e-16,10;UBERON:0004111,9.51e-16,122;UBERON:0002619,8.38e-15,17;UBERON:0003076,5.91e-14,12;UBERON:0003057,5.91e-14,12;UBERON:0000956,1.73e-13,21;UBERON:0001869,1.73e-13,21;UBERON:0000203,1.73e-13,21;UBERON:0002420,1.43e-11,8;UBERON:0007245,1.43e-11,8;UBERON:0010009,1.43e-11,8;UBERON:0010011,1.43e-11,8;UBERON:0000454,1.43e-11,8;UBERON:0002240,4.04e-11,6;UBERON:0005174,4.04e-11,6;UBERON:0001137,4.04e-11,6;UBERON:0011216,1.02e-10,194;UBERON:0001948,2.16e-09,5;UBERON:0002315,2.16e-09,5;UBERON:0002950,9.60e-09,4;UBERON:0001891,9.60e-09,4;UBERON:0009616,9.60e-09,4;UBERON:0010286,9.60e-09,4;UBERON:0000483,4.57e-08,174;UBERON:0000119,7.29e-08,176;UBERON:0004684,2.76e-07,3;UBERON:0002275,2.76e-07,3;UBERON:0002038,3.31e-07,3;UBERON:0009663,3.31e-07,3;UBERON:0009661,3.31e-07,3;UBERON:0000125,3.31e-07,3;UBERON:0002308,3.31e-07,3|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0.286533439938757,0,1.01158230429799,0.528990979272033,1.90149421051854,0,0,0,0,0,0,0,0.725827286159344,0.945041568321835,0.210324961351382,3.42781181284564,1.10434270475807,0.489963196859816,0.670918297127655,1.83843757322004,6.60695285996332,4.59674417106676,5.37622866396852,0.791317726381163,2.01272815925301,2.08365348222704,5.58365998002762,4.50210088025344,5.19514042441154,5.00868595305235,2.42031857358475,2.23679334990361,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0.230615497256059,0.150722640552623,0.352766121407114,0.251333182659351,0.247194967734374,0.144599356919912,0,0.161766849947409,0,0,0,1.75668478206928,2.51336048176146,0,0,0,0,2.24685959107234,2.74500361691176,2.26177833803156,2.43354048269187,2.04572365864264,2.49345653471472,2.43361894601636,0.611036183101898,0,0,0.210441855886474,0.130120442962704,0,0.180062129805349,0.150704817835715,0.204109497453984,0.2562274405697,0.468508622798644,0.776110112217047,0,0.189106080167819,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0.462801338662135,0.232533944750408,0.536546802799238,0,0.16455984991348,0.164167464079095,0,0.146199987425332,0.219550115291051,0.268412837520744,1.47202963994889,1.13195073617213,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0.199141273254367,0.758671603812327,0.571242563048644,0,0.203651327845314,0.193952487167626,0.420814919341911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66277871149944,0,0,0.339490171550376,0,0.335012514883631,0.238043640886014,1.17080188714679,0.630540576424764,1.32878813789265,0.797273843287435,0.655453258862952,0.690739927463582,1.44649058581512,0,0,0.491764273019036,0,1.60550589987792,3.39913891117389,0,0,0.315508219416257,0,0.861693590931196,0,0.222798674082394,0,0,0,0,1.92792789853084,0.141940085208269,0,0.162886959353576,0.494910368917606,0,0,0.302323556964751,0.188605079755898,0,0,0,0,0,0.316036757935816,0,0,1.70219802876894,0,0,0,0.177340233642274,1.24858172321449,1.15184314421485,0.608929898229199,0,0,0,0,0,0.0603129249281559,0,0,0,3.33765543618917,0,0,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0,0.108005340821801,0,0.218362563746178,0.134864346384821,0,0,0.129614973291793,0,0.56369293868419,0,0.165458490457098,0.194451188344048,0.258319646955462,1.18269287843545,1.64300134104056,0.781226309063701,1.04859344425711,1.20792060413003,0.576060012515731,0,0.202725215290164,0.410843828659309,0.909445760844565,0.179026695667481,0.198681354781265,0.120195449519969,0,0.201932899896295,0.0762068066549998,0.100826185136841,0,0.192423683280659,0.116876902181569,0,0,0,0.167884616364078,0.772758376128762,0,0,0,0.501572104035363,3.95326289831947,2.30162618253588,4.58316410751517,2.06223818812425,2.74033007908257,1.5107877947794,1.35004500046361,1.80128481289688,1.35942722695261,2.07104124700728,0,0,0.341467211508268,0,0,0.183843508450014,0,0.206035057238894,0.320919209591815,0,0,0.188626341386076,0.37456602987953,0.192075457214608,0.0574354689556133,0.476293691283074,0.347652977834566,0.38581844092741,0.412085900803307,0.441596760403192,0.685738504770831,0.532427418478012,0,0.290692833264657,0.188218760830661,0.0846146078916765,0.365855945745545,0,0,0,0.474540072496697,0.197008964751127,0,0,0.192906610981141,0.249810577937946,0.701794825336225,0,0.382576664137687,0,0|short_description=p@chr10:59595641..59595663,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:59595641..59595663,+ | |||
|description=CAGE_peak_at_chr10:59595641..59595663,+ | |||
|id=chr10:59595641..59595663,+ | |||
|ontology_enrichment_celltype=CL:0000117!6.14e-15!23;CL:0000337!6.14e-15!23;CL:0000540!9.42e-10!33;CL:0000047!9.42e-10!33;CL:0000031!9.42e-10!33;CL:0000404!9.42e-10!33;CL:0000393!2.74e-07!39;CL:0000211!2.74e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.79e-18,23;CL:0000337,6.79e-18,23;CL:0000540,3.60e-11,33;CL:0000047,3.60e-11,33;CL:0000031,3.60e-11,33;CL:0000404,3.60e-11,33;CL:0000393,8.05e-09,39;CL:0000211,8.05e-09,39;CL:0002319,1.25e-07,43;CL:0000221,2.28e-07,44;CL:0000133,2.28e-07,44;CL:0002610,2.76e-07,3;CL:0002614,3.31e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.60e-23!52;UBERON:0005068!2.60e-23!52;UBERON:0006241!2.60e-23!52;UBERON:0007135!2.60e-23!52;UBERON:0002346!3.60e-23!71;UBERON:0003075!3.60e-23!71;UBERON:0007284!3.60e-23!71;UBERON:0000955!4.67e-22!50;UBERON:0006238!4.67e-22!50;UBERON:0001017!1.91e-21!73;UBERON:0005743!1.91e-21!73;UBERON:0002616!2.28e-21!49;UBERON:0000073!9.87e-21!75;UBERON:0001016!9.87e-21!75;UBERON:0000033!4.15e-20!63;UBERON:0002020!4.96e-20!34;UBERON:0004121!9.67e-19!102;UBERON:0000924!9.67e-19!102;UBERON:0006601!9.67e-19!102;UBERON:0003056!5.12e-18!49;UBERON:0003080!8.38e-18!40;UBERON:0002780!4.23e-17!39;UBERON:0001890!4.23e-17!39;UBERON:0006240!4.23e-17!39;UBERON:0002791!2.07e-16!29;UBERON:0003528!2.07e-16!29;UBERON:0001893!2.07e-16!29;UBERON:0007811!8.85e-15!86;UBERON:0000153!1.13e-12!94;UBERON:0000956!9.00e-11!21;UBERON:0001869!9.00e-11!21;UBERON:0000203!9.00e-11!21;UBERON:0000025!1.25e-10!114;UBERON:0004111!7.02e-10!122;UBERON:0002619!3.77e-09!17;UBERON:0002021!5.36e-08!10;UBERON:0000411!5.36e-08!10;UBERON:0001950!5.36e-08!10;UBERON:0002420!4.83e-07!8;UBERON:0007245!4.83e-07!8;UBERON:0010009!4.83e-07!8;UBERON:0010011!4.83e-07!8;UBERON:0000454!4.83e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.43e-44,54;UBERON:0001049,1.12e-40,52;UBERON:0005068,1.12e-40,52;UBERON:0006241,1.12e-40,52;UBERON:0007135,1.12e-40,52;UBERON:0001017,2.88e-38,73;UBERON:0001016,5.74e-37,75;UBERON:0000955,1.55e-32,47;UBERON:0006238,1.55e-32,47;UBERON:0002346,2.98e-31,64;UBERON:0003075,2.98e-31,64;UBERON:0007284,2.98e-31,64;UBERON:0002616,4.27e-31,46;UBERON:0002020,5.91e-31,34;UBERON:0004121,5.59e-27,95;UBERON:0000924,5.59e-27,95;UBERON:0006601,5.59e-27,95;UBERON:0003080,6.35e-27,40;UBERON:0010371,3.21e-26,73;UBERON:0002780,1.87e-25,39;UBERON:0001890,1.87e-25,39;UBERON:0006240,1.87e-25,39;UBERON:0003528,3.23e-23,29;UBERON:0002791,3.23e-23,29;UBERON:0001893,3.23e-23,29;UBERON:0003056,1.25e-20,49;UBERON:0010314,7.68e-19,92;UBERON:0000025,1.46e-17,114;UBERON:0002021,1.57e-16,10;UBERON:0000411,1.57e-16,10;UBERON:0001950,1.57e-16,10;UBERON:0004111,9.51e-16,122;UBERON:0002619,8.38e-15,17;UBERON:0003076,5.91e-14,12;UBERON:0003057,5.91e-14,12;UBERON:0000956,1.73e-13,21;UBERON:0001869,1.73e-13,21;UBERON:0000203,1.73e-13,21;UBERON:0002420,1.43e-11,8;UBERON:0007245,1.43e-11,8;UBERON:0010009,1.43e-11,8;UBERON:0010011,1.43e-11,8;UBERON:0000454,1.43e-11,8;UBERON:0002240,4.04e-11,6;UBERON:0005174,4.04e-11,6;UBERON:0001137,4.04e-11,6;UBERON:0011216,1.02e-10,194;UBERON:0001948,2.16e-09,5;UBERON:0002315,2.16e-09,5;UBERON:0002950,9.60e-09,4;UBERON:0001891,9.60e-09,4;UBERON:0009616,9.60e-09,4;UBERON:0010286,9.60e-09,4;UBERON:0000483,4.57e-08,174;UBERON:0000119,7.29e-08,176;UBERON:0004684,2.76e-07,3;UBERON:0002275,2.76e-07,3;UBERON:0002038,3.31e-07,3;UBERON:0009663,3.31e-07,3;UBERON:0009661,3.31e-07,3;UBERON:0000125,3.31e-07,3;UBERON:0002308,3.31e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0.286533439938757,0,1.01158230429799,0.528990979272033,1.90149421051854,0,0,0,0,0,0,0,0.725827286159344,0.945041568321835,0.210324961351382,3.42781181284564,1.10434270475807,0.489963196859816,0.670918297127655,1.83843757322004,6.60695285996332,4.59674417106676,5.37622866396852,0.791317726381163,2.01272815925301,2.08365348222704,5.58365998002762,4.50210088025344,5.19514042441154,5.00868595305235,2.42031857358475,2.23679334990361,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0.230615497256059,0.150722640552623,0.352766121407114,0.251333182659351,0.247194967734374,0.144599356919912,0,0.161766849947409,0,0,0,1.75668478206928,2.51336048176146,0,0,0,0,2.24685959107234,2.74500361691176,2.26177833803156,2.43354048269187,2.04572365864264,2.49345653471472,2.43361894601636,0.611036183101898,0,0,0.210441855886474,0.130120442962704,0,0.180062129805349,0.150704817835715,0.204109497453984,0.2562274405697,0.468508622798644,0.776110112217047,0,0.189106080167819,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0.462801338662135,0.232533944750408,0.536546802799238,0,0.16455984991348,0.164167464079095,0,0.146199987425332,0.219550115291051,0.268412837520744,1.47202963994889,1.13195073617213,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0.199141273254367,0.758671603812327,0.571242563048644,0,0.203651327845314,0.193952487167626,0.420814919341911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66277871149944,0,0,0.339490171550376,0,0.335012514883631,0.238043640886014,1.17080188714679,0.630540576424764,1.32878813789265,0.797273843287435,0.655453258862952,0.690739927463582,1.44649058581512,0,0,0.491764273019036,0,1.60550589987792,3.39913891117389,0,0,0.315508219416257,0,0.861693590931196,0,0.222798674082394,0,0,0,0,1.92792789853084,0.141940085208269,0,0.162886959353576,0.494910368917606,0,0,0.302323556964751,0.188605079755898,0,0,0,0,0,0.316036757935816,0,0,1.70219802876894,0,0,0,0.177340233642274,1.24858172321449,1.15184314421485,0.608929898229199,0,0,0,0,0,0.0603129249281559,0,0,0,3.33765543618917,0,0,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0,0.108005340821801,0,0.218362563746178,0.134864346384821,0,0,0.129614973291793,0,0.56369293868419,0,0.165458490457098,0.194451188344048,0.258319646955462,1.18269287843545,1.64300134104056,0.781226309063701,1.04859344425711,1.20792060413003,0.576060012515731,0,0.202725215290164,0.410843828659309,0.909445760844565,0.179026695667481,0.198681354781265,0.120195449519969,0,0.201932899896295,0.0762068066549998,0.100826185136841,0,0.192423683280659,0.116876902181569,0,0,0,0.167884616364078,0.772758376128762,0,0,0,0.501572104035363,3.95326289831947,2.30162618253588,4.58316410751517,2.06223818812425,2.74033007908257,1.5107877947794,1.35004500046361,1.80128481289688,1.35942722695261,2.07104124700728,0,0,0.341467211508268,0,0,0.183843508450014,0,0.206035057238894,0.320919209591815,0,0,0.188626341386076,0.37456602987953,0.192075457214608,0.0574354689556133,0.476293691283074,0.347652977834566,0.38581844092741,0.412085900803307,0.441596760403192,0.685738504770831,0.532427418478012,0,0.290692833264657,0.188218760830661,0.0846146078916765,0.365855945745545,0,0,0,0.474540072496697,0.197008964751127,0,0,0.192906610981141,0.249810577937946,0.701794825336225,0,0.382576664137687,0,0 | |||
|short_description=p@chr10:59595641..59595663,+ | |||
}} |
Latest revision as of 12:34, 4 August 2015
Short description: | p@chr10:59595641..59595663, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:59595641..59595663, + |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.79e-18 | 23 |
neuroblast (sensu Vertebrata) | 6.79e-18 | 23 |
neuron | 3.60e-11 | 33 |
neuronal stem cell | 3.60e-11 | 33 |
neuroblast | 3.60e-11 | 33 |
electrically signaling cell | 3.60e-11 | 33 |
electrically responsive cell | 8.05e-09 | 39 |
electrically active cell | 8.05e-09 | 39 |
neural cell | 1.25e-07 | 43 |
ectodermal cell | 2.28e-07 | 44 |
neurectodermal cell | 2.28e-07 | 44 |
raphe nuclei neuron | 2.76e-07 | 3 |
neuron of the substantia nigra | 3.31e-07 | 3 |