FFCP PHASE1:Hg19::chr3:26664291..26664329,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=116135 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28105 | |||
|TSSclassifier=strong | |||
|UniProt=Q96PB8 | |||
|association_with_transcript=0bp_to_ENST00000396641,NM_052953,uc003cdp.2_5end | |||
|cluster_id=chr3:26664291..26664329,+ | |||
|coexpression_cluster_id=C1198 | |||
|description=CAGE_peak_1_at_LRRC3B_5end | |||
|id=chr3:26664291..26664329,+ | |||
|ontology_enrichment_celltype=CL:0000047!2.53e-11!8;CL:0002322!5.68e-08!5;CL:0000540!1.08e-07!6;CL:0000031!1.08e-07!6;CL:0000404!1.08e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002605;4.05e-09;3!CL:0000047;1.84e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,2.06e-09,8;CL:0002605,3.94e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.58e-16;82!UBERON:0006215;4.31e-10;3!UBERON:0010122;5.46e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.5943834337665,1.50561867580173,3.64073654824928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5062593682237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.397589304964456,0.464775771478074,1.0366105501537,0.756962552626885,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.0898538104645,16.9181810014908,3.09315525111078,7.37071567471135,7.01732626818479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98244294329889,7.03347082052564,0,0,0,0,0,0,0,0,0,0,0,0,0.394573622547734,0,0,5.81599647657131,3.15411533750294,17.9652418201075,0,0,0,0,0,0,0,0,0.173624994933292,4.42870692906919,5.90922549264499,10.6807215421958,9.17807857429164,8.86642856860643,2.63262476584767,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,1.14581926067151,4.01288823649394,1.40558667435203,0,0,0,0,3.62972148145992,11.9368377035891,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0.90392296312213,0,0,2.91229661397042,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,2.40168115483916,0.958337652243951,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0.268733889946905,0,0,0,0,0,0,0,4.77137813885582,7.08257711780193,0.321506296930038,0.687697182986169,0,0,0,4.79921497598395,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.78346938537737,2.6446520348538,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,1.77213635993397,3.78281421196086,3.1297732676625,1.72022758707021,3.10601344303186,3.53949496765886,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.14775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629063767423586,0,0,0.425149840203366,0,0,0,1.89268188003008,0,0,0,4.81719188223446,4.25089728976755,1.59633859057151,5.74325819874114,17.3929470392986,2.07471757392654,3.87541549516443,0,0,0,0,0,0,0,0,0.601682626794058,0,0,0,0,0,2.566428215499,4.68646859168308,2.89361515101658,3.17079050969534,18.5971435066195,0.548257766857182,0,0,0,0.535701835878287,1.3451348888753,0,0.455324382702595,0,0,0,1.69924332442079,2.89400203676536,0,0,0.39246546425257,3.61365856806804,0,1.82631744101899,0,0,2.00134323694638,0,0,0,0,0,0,0,0.860454717640555,0,0,0,0,0,0,0,0,0,0,2.36124455769368,3.4794432940146,1.94284397223656,0,0,0,0,0,0,0,1.74847648403166,0,1.22574160876953,0,4.71140321075869,0.891139200981258,12.679671827502,0,0,0.386747327841463,0,0,0,0,0,0,0.860037498908708,0,3.94350643107305,7.85431242612679,2.645134202577,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,2.48750831837634,1.13776295448085,0.213233981900981,2.3806443146374,0,0.124149428591716,0,0,0.404234377916439,0.435433495793923,1.02669990325584,0,0,0,0,0,0,0,0,0.488965776731466,1.62758471326295,0,0.201273793591026,0 | |||
|short_description=p1@LRRC3B | |||
}} |
Latest revision as of 20:56, 17 September 2015
Short description: | p1@LRRC3B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LRRC3B_5end |
Coexpression cluster: | C1198_Neural_parietal_occipital_Astrocyte_brain_duodenum_temporal |
Association with transcript: | 0bp_to_ENST00000396641, NM_052953, uc003cdp.2_5end |
EntrezGene: | LRRC3B |
HGNC: | 28105 |
UniProt: | Q96PB8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 2.06e-09 | 8 |
astrocyte of the cerebral cortex | 3.94e-09 | 3 |