FFCP PHASE1:Hg19::chr3:58613256..58613263,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11170 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30827 | |||
|TSSclassifier=strong | |||
|UniProt=C9JAU5,O95990 | |||
|association_with_transcript=73bp_to_ENST00000465970,ENST00000474531,uc003dko.2_5end | |||
|cluster_id=chr3:58613256..58613263,- | |||
|coexpression_cluster_id=C550 | |||
|description=CAGE_peak_18_at_FAM107A_5end | |||
|id=chr3:58613256..58613263,- | |||
|ontology_enrichment_celltype=CL:0002367!2.23e-09!2 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.75e-54;3 | |||
|ontology_enrichment_disease=DOID:114!2.87e-09!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.01e-62!57;UBERON:0005068!2.01e-62!57;UBERON:0006241!2.01e-62!57;UBERON:0007135!2.01e-62!57;UBERON:0001017!2.96e-60!82;UBERON:0002616!4.48e-60!59;UBERON:0005743!3.89e-57!86;UBERON:0000955!4.70e-57!69;UBERON:0006238!4.70e-57!69;UBERON:0001893!2.31e-52!34;UBERON:0002780!1.12e-51!41;UBERON:0001890!1.12e-51!41;UBERON:0006240!1.12e-51!41;UBERON:0003075!2.35e-51!86;UBERON:0007284!2.35e-51!86;UBERON:0000073!4.65e-51!94;UBERON:0001016!4.65e-51!94;UBERON:0003080!2.45e-50!42;UBERON:0002791!2.79e-49!33;UBERON:0002346!9.66e-49!90;UBERON:0002020!1.09e-47!34;UBERON:0003528!1.09e-47!34;UBERON:0001869!6.93e-46!32;UBERON:0007023!1.39e-44!115;UBERON:0000033!2.83e-40!123;UBERON:0003056!2.15e-39!61;UBERON:0000153!4.87e-38!129;UBERON:0007811!4.87e-38!129;UBERON:0004121!3.37e-34!169;UBERON:0000924!3.23e-33!173;UBERON:0006601!3.23e-33!173;UBERON:0000956!6.68e-33!25;UBERON:0000203!6.68e-33!25;UBERON:0002619!9.06e-33!22;UBERON:0001950!7.22e-31!20;UBERON:0000200!2.78e-17!6;UBERON:0002420!2.41e-16!9;UBERON:0007245!2.41e-16!9;UBERON:0010009!2.41e-16!9;UBERON:0010011!2.41e-16!9;UBERON:0000454!2.41e-16!9;UBERON:0002308!3.34e-16!9;UBERON:0000125!3.34e-16!9;UBERON:0009663!9.42e-15!7;UBERON:0000025!1.42e-14!194;UBERON:0000064!4.89e-14!219;UBERON:0002771!1.13e-13!3;UBERON:0000477!1.34e-13!286;UBERON:0001871!2.56e-13!7;UBERON:0003076!5.61e-13!15;UBERON:0003057!5.61e-13!15;UBERON:0004733!2.23e-12!12;UBERON:0002028!2.23e-12!12;UBERON:0007277!2.23e-12!12;UBERON:0004111!3.42e-12!241;UBERON:0002680!6.98e-12!9;UBERON:0001895!6.98e-12!9;UBERON:0010092!6.98e-12!9;UBERON:0002037!7.16e-12!6;UBERON:0006215!7.16e-12!6;UBERON:0004732!2.25e-11!13;UBERON:0000369!6.02e-10!4;UBERON:0002435!6.02e-10!4;UBERON:0000204!6.02e-10!4;UBERON:0010082!6.02e-10!4;UBERON:0000475!1.44e-09!365;UBERON:0005969!2.23e-09!2;UBERON:0003956!2.23e-09!2;UBERON:0000483!1.17e-08!309;UBERON:0000119!1.68e-08!312;UBERON:0000349!2.82e-08!5;UBERON:0002021!3.89e-08!5;UBERON:0001872!4.28e-08!5;UBERON:0000062!3.23e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;1.61e-27;6!UBERON:0000073;3.32e-21;53!UBERON:0002616;3.32e-21;53!UBERON:0002619;1.06e-19;22!UBERON:0003112;2.71e-19;1!UBERON:0011158;2.71e-19;1!UBERON:0003128;2.71e-19;1!UBERON:0001703;2.71e-19;1!UBERON:0002241;2.71e-19;1!UBERON:0002680;1.32e-18;9!UBERON:0001895;1.32e-18;9!UBERON:0002791;1.99e-18;32!UBERON:0001869;1.99e-18;32!UBERON:0002780;2.41e-18;41!UBERON:0001890;2.41e-18;41!UBERON:0000956;1.90e-17;25!UBERON:0000203;1.90e-17;25!UBERON:0001893;4.07e-16;34!UBERON:0000349;1.56e-15;5!UBERON:0003528;1.41e-14;34!UBERON:0002020;1.41e-14;34!UBERON:0004733;3.95e-14;12!UBERON:0002028;3.95e-14;12!UBERON:0001950;4.76e-14;20!UBERON:0004732;4.28e-13;13!UBERON:0001016;1.44e-10;83!UBERON:0001897;1.50e-10;2!UBERON:0001954;1.50e-10;2!UBERON:0003022;1.50e-10;2!UBERON:0002421;1.50e-10;2!UBERON:0010225;1.50e-10;2!UBERON:0002600;1.50e-10;2!UBERON:0001876;2.48e-10;2!UBERON:0002702;2.48e-10;2!UBERON:0001875;2.48e-10;2!UBERON:0006514;2.48e-10;2!UBERON:0001017;2.42e-09;75!UBERON:0002420;5.86e-09;9!UBERON:0007245;5.86e-09;9!UBERON:0010009;5.86e-09;9!UBERON:0010011;5.86e-09;9!UBERON:0000454;5.86e-09;9!UBERON:0000955;7.62e-08;68!UBERON:0001870;2.63e-07;3!UBERON:0007023;7.64e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.03e-32,53;UBERON:0002616,1.03e-32,53;UBERON:0001049,5.74e-31,56;UBERON:0005068,5.74e-31,56;UBERON:0006241,5.74e-31,56;UBERON:0007135,5.74e-31,56;UBERON:0002037,1.23e-27,6;UBERON:0006215,1.23e-27,6;UBERON:0000955,3.94e-25,68;UBERON:0006238,3.94e-25,68;UBERON:0001017,4.08e-21,81;UBERON:0003075,4.08e-21,82;UBERON:0007284,4.08e-21,82;UBERON:0002780,9.34e-21,41;UBERON:0001890,9.34e-21,41;UBERON:0003080,9.34e-21,41;UBERON:0006240,9.34e-21,41;UBERON:0002346,4.04e-20,86;UBERON:0002619,1.22e-19,22;UBERON:0002791,1.64e-19,32;UBERON:0001869,1.64e-19,32;UBERON:0003112,3.91e-19,1;UBERON:0011158,3.91e-19,1;UBERON:0003128,3.91e-19,1;UBERON:0001703,3.91e-19,1;UBERON:0002241,3.91e-19,1;UBERON:0004761,3.91e-19,1;UBERON:0009617,3.91e-19,1;UBERON:0001016,5.37e-19,89;UBERON:0002680,1.10e-18,9;UBERON:0001895,1.10e-18,9;UBERON:0010092,1.10e-18,9;UBERON:0003528,2.14e-18,34;UBERON:0002020,2.14e-18,34;UBERON:0001893,2.14e-18,34;UBERON:0000956,2.15e-17,25;UBERON:0000203,2.15e-17,25;UBERON:0010371,1.42e-16,104;UBERON:0010314,9.24e-16,132;UBERON:0000349,2.02e-15,5;UBERON:0007023,3.39e-15,114;UBERON:0004733,3.45e-14,12;UBERON:0002028,3.45e-14,12;UBERON:0007277,3.45e-14,12;UBERON:0001950,5.28e-14,20;UBERON:0003056,5.58e-14,61;UBERON:0004732,3.78e-13,13;UBERON:0003076,1.76e-11,15;UBERON:0003057,1.76e-11,15;UBERON:0001897,1.43e-10,2;UBERON:0010225,1.43e-10,2;UBERON:0001954,1.57e-10,2;UBERON:0003022,1.57e-10,2;UBERON:0002421,1.57e-10,2;UBERON:0002600,1.57e-10,2;UBERON:0001875,2.07e-10,2;UBERON:0006514,2.07e-10,2;UBERON:0002702,2.27e-10,2;UBERON:0005253,2.99e-10,2;UBERON:0001876,3.27e-10,2;UBERON:0004121,9.79e-10,171;UBERON:0000924,9.79e-10,171;UBERON:0006601,9.79e-10,171;UBERON:0002420,6.11e-09,9;UBERON:0007245,6.11e-09,9;UBERON:0010009,6.11e-09,9;UBERON:0010011,6.11e-09,9;UBERON:0000454,6.11e-09,9;UBERON:0011216,6.17e-09,223;UBERON:0000025,1.06e-08,192;UBERON:0001870,2.47e-07,3;UBERON:0004111,8.30e-07,240 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0.245668634623536,0.206651562351531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1253553312841,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.844175070377856,1.52581736317083,1.76926815889959,1.47773809476774,0.87754158861589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606610196826093,0,0.468528891450678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64286454670392,0,0,0,0,0.458320848023367,0,0.199679000498991,0.858452096273142,0,0,0,0,0,0,0,0,0,0,2.04305109167363,0,0,0,0,0,0.303747783290123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,1.6274820991845,0,0.332787154610557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,1.75597244962866,0.205116364240755,0,0.276629009856872,1.45328081068666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,1.03343398250592,0.253663240775627,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0.263091094251396,0,0,0,0.628462359664008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0.143339583151451,0,0.271965960763659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37895890482359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p18@FAM107A | |||
}} |
Latest revision as of 06:34, 19 September 2015
Short description: | p18@FAM107A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_FAM107A_5end |
Coexpression cluster: | C550_hippocampus_amygdala_globus_medial_occipital_thalamus_middle |
Association with transcript: | 73bp_to_ENST00000465970, ENST00000474531, uc003dko.2_5end |
EntrezGene: | FAM107A |
HGNC: | 30827 |
UniProt: | C9JAU5O95990 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data