FFCP PHASE1:Mm9::chr15:76352677..76352737,-: Difference between revisions
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{{FFCP|EntrezGene=170729|HGNC=|MCL_coexpression_id=1|UniProt=Q99M85|association_with_transcript=-118bp_to_ENSMUST00000096365,NM_130893,uc007wko.1_5end|description=CAGE_peak_3_at_Scrt1_5end|id=chr15:76352677..76352737,-|ontology_enrichment_celltype=CL:0000540!1.24e-17!33;CL:0000047!1.24e-17!33;CL:0000031!1.24e-17!33;CL:0000404!1.24e-17!33;CL:0000117!2.56e-17!23;CL:0000337!2.56e-17!23;CL:0000393!5.31e-13!39;CL:0000211!5.31e-13!39;CL:0000221!1.35e-12!44;CL:0000133!1.35e-12!44;CL:0002319!3.90e-12!43;CL:0000055!8.42e-09!50|ontology_enrichment_celltype_v019_2=CL:0000117,9.57e-23,23;CL:0000337,9.57e-23,23;CL:0000540,5.68e-17,33;CL:0000047,5.68e-17,33;CL:0000031,5.68e-17,33;CL:0000404,5.68e-17,33;CL:0000393,4.61e-13,39;CL:0000211,4.61e-13,39;CL:0000221,1.20e-11,44;CL:0000133,1.20e-11,44;CL:0002319,4.28e-11,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.17e-35!73;UBERON:0005743!4.17e-35!73;UBERON:0000073!1.91e-33!75;UBERON:0001016!1.91e-33!75;UBERON:0000033!8.16e-32!63;UBERON:0002346!1.31e-30!71;UBERON:0003075!1.31e-30!71;UBERON:0007284!1.31e-30!71;UBERON:0004121!1.55e-30!102;UBERON:0000924!1.55e-30!102;UBERON:0006601!1.55e-30!102;UBERON:0001049!8.48e-29!52;UBERON:0005068!8.48e-29!52;UBERON:0006241!8.48e-29!52;UBERON:0007135!8.48e-29!52;UBERON:0003056!2.32e-27!49;UBERON:0000955!2.32e-27!50;UBERON:0006238!2.32e-27!50;UBERON:0002616!1.32e-26!49;UBERON:0003080!2.78e-22!40;UBERON:0002020!7.89e-22!34;UBERON:0002780!2.06e-21!39;UBERON:0001890!2.06e-21!39;UBERON:0006240!2.06e-21!39;UBERON:0007811!1.94e-18!86;UBERON:0002791!7.34e-18!29;UBERON:0003528!7.34e-18!29;UBERON:0001893!7.34e-18!29;UBERON:0000153!5.40e-15!94;UBERON:0000956!1.25e-12!21;UBERON:0001869!1.25e-12!21;UBERON:0000203!1.25e-12!21;UBERON:0002619!2.95e-10!17;UBERON:0002021!1.24e-09!10;UBERON:0000411!1.24e-09!10;UBERON:0001950!1.24e-09!10;UBERON:0003076!5.79e-07!12;UBERON:0003057!5.79e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0002346,3.57e-36,64;UBERON:0003075,3.57e-36,64;UBERON:0007284,3.57e-36,64;UBERON:0000073,4.02e-34,54;UBERON:0001017,1.82e-32,73;UBERON:0004121,5.62e-32,95;UBERON:0000924,5.62e-32,95;UBERON:0006601,5.62e-32,95;UBERON:0001049,1.62e-31,52;UBERON:0005068,1.62e-31,52;UBERON:0006241,1.62e-31,52;UBERON:0007135,1.62e-31,52;UBERON:0001016,3.91e-31,75;UBERON:0010371,5.45e-31,73;UBERON:0002020,2.38e-29,34;UBERON:0003056,5.70e-28,49;UBERON:0000955,4.56e-26,47;UBERON:0006238,4.56e-26,47;UBERON:0002616,3.96e-25,46;UBERON:0003528,5.51e-24,29;UBERON:0002791,5.51e-24,29;UBERON:0001893,5.51e-24,29;UBERON:0003080,1.50e-22,40;UBERON:0002780,1.83e-21,39;UBERON:0001890,1.83e-21,39;UBERON:0006240,1.83e-21,39;UBERON:0010314,4.23e-21,92;UBERON:0000956,6.36e-17,21;UBERON:0001869,6.36e-17,21;UBERON:0000203,6.36e-17,21;UBERON:0002619,1.00e-13,17;UBERON:0002021,2.08e-12,10;UBERON:0000411,2.08e-12,10;UBERON:0001950,2.08e-12,10;UBERON:0003076,2.78e-09,12;UBERON:0003057,2.78e-09,12;UBERON:0002420,3.60e-08,8;UBERON:0007245,3.60e-08,8;UBERON:0010009,3.60e-08,8;UBERON:0010011,3.60e-08,8;UBERON:0000454,3.60e-08,8;UBERON:0002240,1.46e-07,6;UBERON:0005174,1.46e-07,6;UBERON:0001137,1.46e-07,6;UBERON:0000025,3.77e-07,114|phase1_expression=0.960893082628764,0,0,0,0.500895729946347,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0.157731082679119,0,0,3.99703463710028,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.1853168687678,16.398720357433,18.3811107016792,0,0,0,0,0,0.299600110518405,0.384218305321555,3.7328260431052,5.40023753326763,3.15487442027073,19.4242669394586,20.5407743085001,8.94182834269164,9.77623804386011,11.0306254393203,23.1243350098716,31.1557104927858,23.8090126547177,10.8146755938759,10.0636407962651,10.4182674111352,18.7052609330925,9.56696437053856,8.55670187550137,17.0884579574727,16.2303716110977,13.7935589910722,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,2.95771181531029,0,0,0,0,0,0,1.1418387971906,0,0,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,16.9812862266697,18.0124167859571,0,0,0,0,21.12048015608,11.4375150704657,5.02617408451458,24.1615805067264,22.5029602450691,25.3501414362663,19.6311928311987,0,0,0,0.631325567659422,2.21204753036596,5.51765050640335,8.64298223065676,5.42537344208574,5.91917542616552,6.79002717509704,3.27956035959051,5.17406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.41159794256509,3.60166143327496,0,0,0,0,0.257734922644187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.5275438080589,18.0505997351993,0,0,0.315508219416257,0,1.07711698866399,0.238968797952552,0.222798674082394,0.283076530788832,0.404810701674894,1.16902343164525,1.18586333383957,11.5675673911851,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0.316036757935816,0,0,0.680879211507576,0.900305470156551,1.03486947026204,0.428674070063185,0.177340233642274,0.713475270408282,1.97458824722545,0.913394847343798,0,0,0,0,0,0,0,0,0,18.7279555030615,0,0,0,0,0,0,0,0,0,0,0.474503990371703,0.406638934253697,0,0.209088296014469,0.218362563746178,0,0.0826534557253359,0,0,0,4.50954350947352,0,0,0,0,0,0,0,0,0,2.88030006257865,0,0.405450430580328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.0720589637461,21.1749608793301,25.2074025913335,15.6386395932756,14.3867329151835,35.5035131773159,16.8755625057951,21.6154177547626,23.5634052671786,26.4057758993428,5.60451676954554,12.768795948833,3.24393850932855,2.43106717068294,1.04806581313991,3.12533964365024,0.888986911206461,2.06035057238894,1.92551525755089,1.26348605881899,2.02783439912192,0.943131706930381,1.31098110457835,0.960377286073039,1.14870937911227,0.952587382566147,1.39061191133827,0.77163688185482,0,1.17759136107518,1.37147700954166,1.24233064311536,0.476872379894642,1.16277133305863,0.846984423737976,0.676916863133412,1.09756783723664,1.31534855718921,0.679020569229309,2.24456908663095,1.18635018124174,0.985044823755635,0.409231043169689,1.39443157067369,0.578719832943424,5.74564329257276,0.233931608445408,1.28922632428979,0.382576664137687,0.882365676478062,0.231867835620421|short_description=p3@Scrt1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=170729 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q99M85 | |||
|association_with_transcript=-118bp_to_ENSMUST00000096365,NM_130893,uc007wko.1_5end | |||
|cluster_id=chr15:76352677..76352737,- | |||
|description=CAGE_peak_3_at_Scrt1_5end | |||
|id=chr15:76352677..76352737,- | |||
|ontology_enrichment_celltype=CL:0000540!1.24e-17!33;CL:0000047!1.24e-17!33;CL:0000031!1.24e-17!33;CL:0000404!1.24e-17!33;CL:0000117!2.56e-17!23;CL:0000337!2.56e-17!23;CL:0000393!5.31e-13!39;CL:0000211!5.31e-13!39;CL:0000221!1.35e-12!44;CL:0000133!1.35e-12!44;CL:0002319!3.90e-12!43;CL:0000055!8.42e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.57e-23,23;CL:0000337,9.57e-23,23;CL:0000540,5.68e-17,33;CL:0000047,5.68e-17,33;CL:0000031,5.68e-17,33;CL:0000404,5.68e-17,33;CL:0000393,4.61e-13,39;CL:0000211,4.61e-13,39;CL:0000221,1.20e-11,44;CL:0000133,1.20e-11,44;CL:0002319,4.28e-11,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.17e-35!73;UBERON:0005743!4.17e-35!73;UBERON:0000073!1.91e-33!75;UBERON:0001016!1.91e-33!75;UBERON:0000033!8.16e-32!63;UBERON:0002346!1.31e-30!71;UBERON:0003075!1.31e-30!71;UBERON:0007284!1.31e-30!71;UBERON:0004121!1.55e-30!102;UBERON:0000924!1.55e-30!102;UBERON:0006601!1.55e-30!102;UBERON:0001049!8.48e-29!52;UBERON:0005068!8.48e-29!52;UBERON:0006241!8.48e-29!52;UBERON:0007135!8.48e-29!52;UBERON:0003056!2.32e-27!49;UBERON:0000955!2.32e-27!50;UBERON:0006238!2.32e-27!50;UBERON:0002616!1.32e-26!49;UBERON:0003080!2.78e-22!40;UBERON:0002020!7.89e-22!34;UBERON:0002780!2.06e-21!39;UBERON:0001890!2.06e-21!39;UBERON:0006240!2.06e-21!39;UBERON:0007811!1.94e-18!86;UBERON:0002791!7.34e-18!29;UBERON:0003528!7.34e-18!29;UBERON:0001893!7.34e-18!29;UBERON:0000153!5.40e-15!94;UBERON:0000956!1.25e-12!21;UBERON:0001869!1.25e-12!21;UBERON:0000203!1.25e-12!21;UBERON:0002619!2.95e-10!17;UBERON:0002021!1.24e-09!10;UBERON:0000411!1.24e-09!10;UBERON:0001950!1.24e-09!10;UBERON:0003076!5.79e-07!12;UBERON:0003057!5.79e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,3.57e-36,64;UBERON:0003075,3.57e-36,64;UBERON:0007284,3.57e-36,64;UBERON:0000073,4.02e-34,54;UBERON:0001017,1.82e-32,73;UBERON:0004121,5.62e-32,95;UBERON:0000924,5.62e-32,95;UBERON:0006601,5.62e-32,95;UBERON:0001049,1.62e-31,52;UBERON:0005068,1.62e-31,52;UBERON:0006241,1.62e-31,52;UBERON:0007135,1.62e-31,52;UBERON:0001016,3.91e-31,75;UBERON:0010371,5.45e-31,73;UBERON:0002020,2.38e-29,34;UBERON:0003056,5.70e-28,49;UBERON:0000955,4.56e-26,47;UBERON:0006238,4.56e-26,47;UBERON:0002616,3.96e-25,46;UBERON:0003528,5.51e-24,29;UBERON:0002791,5.51e-24,29;UBERON:0001893,5.51e-24,29;UBERON:0003080,1.50e-22,40;UBERON:0002780,1.83e-21,39;UBERON:0001890,1.83e-21,39;UBERON:0006240,1.83e-21,39;UBERON:0010314,4.23e-21,92;UBERON:0000956,6.36e-17,21;UBERON:0001869,6.36e-17,21;UBERON:0000203,6.36e-17,21;UBERON:0002619,1.00e-13,17;UBERON:0002021,2.08e-12,10;UBERON:0000411,2.08e-12,10;UBERON:0001950,2.08e-12,10;UBERON:0003076,2.78e-09,12;UBERON:0003057,2.78e-09,12;UBERON:0002420,3.60e-08,8;UBERON:0007245,3.60e-08,8;UBERON:0010009,3.60e-08,8;UBERON:0010011,3.60e-08,8;UBERON:0000454,3.60e-08,8;UBERON:0002240,1.46e-07,6;UBERON:0005174,1.46e-07,6;UBERON:0001137,1.46e-07,6;UBERON:0000025,3.77e-07,114 | |||
|phase1_expression=0.960893082628764,0,0,0,0.500895729946347,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0.157731082679119,0,0,3.99703463710028,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.1853168687678,16.398720357433,18.3811107016792,0,0,0,0,0,0.299600110518405,0.384218305321555,3.7328260431052,5.40023753326763,3.15487442027073,19.4242669394586,20.5407743085001,8.94182834269164,9.77623804386011,11.0306254393203,23.1243350098716,31.1557104927858,23.8090126547177,10.8146755938759,10.0636407962651,10.4182674111352,18.7052609330925,9.56696437053856,8.55670187550137,17.0884579574727,16.2303716110977,13.7935589910722,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,2.95771181531029,0,0,0,0,0,0,1.1418387971906,0,0,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,16.9812862266697,18.0124167859571,0,0,0,0,21.12048015608,11.4375150704657,5.02617408451458,24.1615805067264,22.5029602450691,25.3501414362663,19.6311928311987,0,0,0,0.631325567659422,2.21204753036596,5.51765050640335,8.64298223065676,5.42537344208574,5.91917542616552,6.79002717509704,3.27956035959051,5.17406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.41159794256509,3.60166143327496,0,0,0,0,0.257734922644187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.5275438080589,18.0505997351993,0,0,0.315508219416257,0,1.07711698866399,0.238968797952552,0.222798674082394,0.283076530788832,0.404810701674894,1.16902343164525,1.18586333383957,11.5675673911851,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0.316036757935816,0,0,0.680879211507576,0.900305470156551,1.03486947026204,0.428674070063185,0.177340233642274,0.713475270408282,1.97458824722545,0.913394847343798,0,0,0,0,0,0,0,0,0,18.7279555030615,0,0,0,0,0,0,0,0,0,0,0.474503990371703,0.406638934253697,0,0.209088296014469,0.218362563746178,0,0.0826534557253359,0,0,0,4.50954350947352,0,0,0,0,0,0,0,0,0,2.88030006257865,0,0.405450430580328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.0720589637461,21.1749608793301,25.2074025913335,15.6386395932756,14.3867329151835,35.5035131773159,16.8755625057951,21.6154177547626,23.5634052671786,26.4057758993428,5.60451676954554,12.768795948833,3.24393850932855,2.43106717068294,1.04806581313991,3.12533964365024,0.888986911206461,2.06035057238894,1.92551525755089,1.26348605881899,2.02783439912192,0.943131706930381,1.31098110457835,0.960377286073039,1.14870937911227,0.952587382566147,1.39061191133827,0.77163688185482,0,1.17759136107518,1.37147700954166,1.24233064311536,0.476872379894642,1.16277133305863,0.846984423737976,0.676916863133412,1.09756783723664,1.31534855718921,0.679020569229309,2.24456908663095,1.18635018124174,0.985044823755635,0.409231043169689,1.39443157067369,0.578719832943424,5.74564329257276,0.233931608445408,1.28922632428979,0.382576664137687,0.882365676478062,0.231867835620421 | |||
|short_description=p3@Scrt1 | |||
}} |
Latest revision as of 00:49, 27 September 2015
Short description: | p3@Scrt1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Scrt1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -118bp_to_ENSMUST00000096365, NM_130893, uc007wko.1_5end |
EntrezGene: | Scrt1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.57e-23 | 23 |
neuroblast (sensu Vertebrata) | 9.57e-23 | 23 |
neuron | 5.68e-17 | 33 |
neuronal stem cell | 5.68e-17 | 33 |
neuroblast | 5.68e-17 | 33 |
electrically signaling cell | 5.68e-17 | 33 |
electrically responsive cell | 4.61e-13 | 39 |
electrically active cell | 4.61e-13 | 39 |
ectodermal cell | 1.20e-11 | 44 |
neurectodermal cell | 1.20e-11 | 44 |
neural cell | 4.28e-11 | 43 |