FFCP PHASE1:Mm9::chr15:76352740..76352781,-: Difference between revisions
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{{FFCP|EntrezGene=170729|HGNC=|MCL_coexpression_id=22|UniProt=Q99M85|association_with_transcript=-181bp_to_ENSMUST00000096365,NM_130893,uc007wko.1_5end|description=CAGE_peak_5_at_Scrt1_5end|id=chr15:76352740..76352781,-|ontology_enrichment_celltype=CL:0000117!2.08e-18!23;CL:0000337!2.08e-18!23;CL:0000540!2.09e-17!33;CL:0000047!2.09e-17!33;CL:0000031!2.09e-17!33;CL:0000404!2.09e-17!33;CL:0000393!6.46e-13!39;CL:0000211!6.46e-13!39;CL:0000221!1.06e-11!44;CL:0000133!1.06e-11!44;CL:0002319!2.33e-11!43;CL:0000055!2.85e-08!50;CL:0002609!7.45e-07!6|ontology_enrichment_celltype_v019_2=CL:0000117,7.20e-25,23;CL:0000337,7.20e-25,23;CL:0000540,6.00e-15,33;CL:0000047,6.00e-15,33;CL:0000031,6.00e-15,33;CL:0000404,6.00e-15,33;CL:0000393,1.65e-11,39;CL:0000211,1.65e-11,39;CL:0002319,8.87e-10,43;CL:0000221,2.13e-09,44;CL:0000133,2.13e-09,44;CL:0002609,8.46e-09,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!8.72e-30!73;UBERON:0005743!8.72e-30!73;UBERON:0002346!3.68e-29!71;UBERON:0003075!3.68e-29!71;UBERON:0007284!3.68e-29!71;UBERON:0000073!2.38e-28!75;UBERON:0001016!2.38e-28!75;UBERON:0000033!5.31e-28!63;UBERON:0004121!1.13e-26!102;UBERON:0000924!1.13e-26!102;UBERON:0006601!1.13e-26!102;UBERON:0001049!1.41e-26!52;UBERON:0005068!1.41e-26!52;UBERON:0006241!1.41e-26!52;UBERON:0007135!1.41e-26!52;UBERON:0000955!1.67e-24!50;UBERON:0006238!1.67e-24!50;UBERON:0003056!3.36e-24!49;UBERON:0002616!8.11e-24!49;UBERON:0002020!7.17e-21!34;UBERON:0003080!5.16e-20!40;UBERON:0002780!2.71e-19!39;UBERON:0001890!2.71e-19!39;UBERON:0006240!2.71e-19!39;UBERON:0002791!1.74e-16!29;UBERON:0003528!1.74e-16!29;UBERON:0001893!1.74e-16!29;UBERON:0007811!5.46e-15!86;UBERON:0000956!2.54e-12!21;UBERON:0001869!2.54e-12!21;UBERON:0000203!2.54e-12!21;UBERON:0000153!4.18e-12!94;UBERON:0002619!2.45e-09!17;UBERON:0002021!1.48e-07!10;UBERON:0000411!1.48e-07!10;UBERON:0001950!1.48e-07!10;UBERON:0003076!4.53e-07!12;UBERON:0003057!4.53e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.09e-25,34;UBERON:0000073,2.14e-24,54;UBERON:0002346,5.05e-24,64;UBERON:0003075,5.05e-24,64;UBERON:0007284,5.05e-24,64;UBERON:0001049,2.99e-22,52;UBERON:0005068,2.99e-22,52;UBERON:0006241,2.99e-22,52;UBERON:0007135,2.99e-22,52;UBERON:0001017,3.83e-21,73;UBERON:0001016,3.29e-20,75;UBERON:0003528,8.07e-20,29;UBERON:0002791,8.07e-20,29;UBERON:0001893,8.07e-20,29;UBERON:0004121,2.04e-19,95;UBERON:0000924,2.04e-19,95;UBERON:0006601,2.04e-19,95;UBERON:0010371,2.18e-19,73;UBERON:0003056,2.83e-19,49;UBERON:0000955,2.51e-17,47;UBERON:0006238,2.51e-17,47;UBERON:0002616,1.52e-16,46;UBERON:0003080,6.52e-16,40;UBERON:0002780,4.57e-15,39;UBERON:0001890,4.57e-15,39;UBERON:0006240,4.57e-15,39;UBERON:0000956,5.96e-14,21;UBERON:0001869,5.96e-14,21;UBERON:0000203,5.96e-14,21;UBERON:0010314,1.06e-12,92;UBERON:0002619,4.90e-10,17;UBERON:0002021,2.58e-08,10;UBERON:0000411,2.58e-08,10;UBERON:0001950,2.58e-08,10;UBERON:0002240,1.12e-07,6;UBERON:0005174,1.12e-07,6;UBERON:0001137,1.12e-07,6;UBERON:0001948,2.44e-07,5;UBERON:0002315,2.44e-07,5;UBERON:0002420,4.53e-07,8;UBERON:0007245,4.53e-07,8;UBERON:0010009,4.53e-07,8;UBERON:0010011,4.53e-07,8;UBERON:0000454,4.53e-07,8;UBERON:0003076,4.60e-07,12;UBERON:0003057,4.60e-07,12;UBERON:0000369,5.91e-07,5;UBERON:0002435,5.91e-07,5;UBERON:0000204,5.91e-07,5;UBERON:0010082,5.91e-07,5|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,3.40173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,17.3992156339254,15.869729378161,15.8457850876545,0,0,0,0,0,0,0,7.77672092313582,7.42532660824299,7.57169860864975,5.99867067247988,10.1599528837742,16.4137670948038,20.5109307979026,18.3843757322004,3.30347642998166,2.93680877595932,2.91852413186863,11.8697658957174,11.4359554503012,13.022834263919,3.07101298901519,0,1.37518422999129,10.9012576625257,9.5389026135399,12.1159639786445,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.845060518660083,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0.173485326766136,0,0.461230994512117,0,0.23517741427141,0,0,0,0,0,0,0,0,2.34224637609238,5.23616767033638,0,0,0,0,3.2953940669061,1.83000241127451,7.91622418311046,2.60736480288415,1.79000820131231,1.66230435647648,1.62241263067758,0,0,0,0,0.780722657776222,1.37941262660084,7.20248519221397,3.76762044589288,4.69451844144162,5.38077625196369,3.09215691047105,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,4.52780294468852,0,0,0.213288250535234,0,0.128867461322093,0.201683524623343,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0871576698413,0.703270119553219,0,0,0.315508219416257,0,0.646270193198397,0,0.222798674082394,0.283076530788832,0.404810701674894,0.584511715822624,0.395287777946524,2.89189184779626,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0.36012218806262,0.646793418913773,0.428674070063185,0.354680467284547,0.535106452806212,0.822745103010605,0.304464949114599,0,0,0,0,0,0,0,0,0,1.11255181206306,0,0.206386867963223,0,0,0,0,0,0,0,0,0.474503990371703,0,0,0,0,0,0,0,0,0,15.2197093444731,0,0,0,0,0,0,0,0,0.483168241652012,6.91272015018877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3885110557024,3.68260189205742,5.15605962095457,2.92150409984269,2.05524755931193,2.2661816921691,0.675022500231806,3.15224842256954,2.71885445390523,5.1776031175182,1.97195960409936,7.58147259461959,2.90247129782028,1.70174701947806,2.09613162627982,2.38996560985018,1.55572709461131,1.23621034343337,1.60459604795908,1.01078884705519,1.77435509923168,1.32038438970253,0.936415074698824,1.34452820050225,1.14870937911227,0.476293691283074,1.0429589335037,1.92909220463705,0.824171801606613,1.17759136107518,1.37147700954166,1.4198064492747,0.715308569841963,1.16277133305863,1.2234219453993,1.4384483341585,2.0122077016005,2.89376682581627,2.03706170768793,1.12228454331548,1.54225523561426,1.0835493061312,0.409231043169689,0.619747364743864,1.73615949883027,4.49659040288303,0.935726433781634,1.71896843238639,0.191288332068843,0.220591419119515,0|short_description=p5@Scrt1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=170729 | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=Q99M85 | |||
|association_with_transcript=-181bp_to_ENSMUST00000096365,NM_130893,uc007wko.1_5end | |||
|cluster_id=chr15:76352740..76352781,- | |||
|description=CAGE_peak_5_at_Scrt1_5end | |||
|id=chr15:76352740..76352781,- | |||
|ontology_enrichment_celltype=CL:0000117!2.08e-18!23;CL:0000337!2.08e-18!23;CL:0000540!2.09e-17!33;CL:0000047!2.09e-17!33;CL:0000031!2.09e-17!33;CL:0000404!2.09e-17!33;CL:0000393!6.46e-13!39;CL:0000211!6.46e-13!39;CL:0000221!1.06e-11!44;CL:0000133!1.06e-11!44;CL:0002319!2.33e-11!43;CL:0000055!2.85e-08!50;CL:0002609!7.45e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.20e-25,23;CL:0000337,7.20e-25,23;CL:0000540,6.00e-15,33;CL:0000047,6.00e-15,33;CL:0000031,6.00e-15,33;CL:0000404,6.00e-15,33;CL:0000393,1.65e-11,39;CL:0000211,1.65e-11,39;CL:0002319,8.87e-10,43;CL:0000221,2.13e-09,44;CL:0000133,2.13e-09,44;CL:0002609,8.46e-09,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.72e-30!73;UBERON:0005743!8.72e-30!73;UBERON:0002346!3.68e-29!71;UBERON:0003075!3.68e-29!71;UBERON:0007284!3.68e-29!71;UBERON:0000073!2.38e-28!75;UBERON:0001016!2.38e-28!75;UBERON:0000033!5.31e-28!63;UBERON:0004121!1.13e-26!102;UBERON:0000924!1.13e-26!102;UBERON:0006601!1.13e-26!102;UBERON:0001049!1.41e-26!52;UBERON:0005068!1.41e-26!52;UBERON:0006241!1.41e-26!52;UBERON:0007135!1.41e-26!52;UBERON:0000955!1.67e-24!50;UBERON:0006238!1.67e-24!50;UBERON:0003056!3.36e-24!49;UBERON:0002616!8.11e-24!49;UBERON:0002020!7.17e-21!34;UBERON:0003080!5.16e-20!40;UBERON:0002780!2.71e-19!39;UBERON:0001890!2.71e-19!39;UBERON:0006240!2.71e-19!39;UBERON:0002791!1.74e-16!29;UBERON:0003528!1.74e-16!29;UBERON:0001893!1.74e-16!29;UBERON:0007811!5.46e-15!86;UBERON:0000956!2.54e-12!21;UBERON:0001869!2.54e-12!21;UBERON:0000203!2.54e-12!21;UBERON:0000153!4.18e-12!94;UBERON:0002619!2.45e-09!17;UBERON:0002021!1.48e-07!10;UBERON:0000411!1.48e-07!10;UBERON:0001950!1.48e-07!10;UBERON:0003076!4.53e-07!12;UBERON:0003057!4.53e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.09e-25,34;UBERON:0000073,2.14e-24,54;UBERON:0002346,5.05e-24,64;UBERON:0003075,5.05e-24,64;UBERON:0007284,5.05e-24,64;UBERON:0001049,2.99e-22,52;UBERON:0005068,2.99e-22,52;UBERON:0006241,2.99e-22,52;UBERON:0007135,2.99e-22,52;UBERON:0001017,3.83e-21,73;UBERON:0001016,3.29e-20,75;UBERON:0003528,8.07e-20,29;UBERON:0002791,8.07e-20,29;UBERON:0001893,8.07e-20,29;UBERON:0004121,2.04e-19,95;UBERON:0000924,2.04e-19,95;UBERON:0006601,2.04e-19,95;UBERON:0010371,2.18e-19,73;UBERON:0003056,2.83e-19,49;UBERON:0000955,2.51e-17,47;UBERON:0006238,2.51e-17,47;UBERON:0002616,1.52e-16,46;UBERON:0003080,6.52e-16,40;UBERON:0002780,4.57e-15,39;UBERON:0001890,4.57e-15,39;UBERON:0006240,4.57e-15,39;UBERON:0000956,5.96e-14,21;UBERON:0001869,5.96e-14,21;UBERON:0000203,5.96e-14,21;UBERON:0010314,1.06e-12,92;UBERON:0002619,4.90e-10,17;UBERON:0002021,2.58e-08,10;UBERON:0000411,2.58e-08,10;UBERON:0001950,2.58e-08,10;UBERON:0002240,1.12e-07,6;UBERON:0005174,1.12e-07,6;UBERON:0001137,1.12e-07,6;UBERON:0001948,2.44e-07,5;UBERON:0002315,2.44e-07,5;UBERON:0002420,4.53e-07,8;UBERON:0007245,4.53e-07,8;UBERON:0010009,4.53e-07,8;UBERON:0010011,4.53e-07,8;UBERON:0000454,4.53e-07,8;UBERON:0003076,4.60e-07,12;UBERON:0003057,4.60e-07,12;UBERON:0000369,5.91e-07,5;UBERON:0002435,5.91e-07,5;UBERON:0000204,5.91e-07,5;UBERON:0010082,5.91e-07,5 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,3.40173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,17.3992156339254,15.869729378161,15.8457850876545,0,0,0,0,0,0,0,7.77672092313582,7.42532660824299,7.57169860864975,5.99867067247988,10.1599528837742,16.4137670948038,20.5109307979026,18.3843757322004,3.30347642998166,2.93680877595932,2.91852413186863,11.8697658957174,11.4359554503012,13.022834263919,3.07101298901519,0,1.37518422999129,10.9012576625257,9.5389026135399,12.1159639786445,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.845060518660083,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0.173485326766136,0,0.461230994512117,0,0.23517741427141,0,0,0,0,0,0,0,0,2.34224637609238,5.23616767033638,0,0,0,0,3.2953940669061,1.83000241127451,7.91622418311046,2.60736480288415,1.79000820131231,1.66230435647648,1.62241263067758,0,0,0,0,0.780722657776222,1.37941262660084,7.20248519221397,3.76762044589288,4.69451844144162,5.38077625196369,3.09215691047105,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,4.52780294468852,0,0,0.213288250535234,0,0.128867461322093,0.201683524623343,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0871576698413,0.703270119553219,0,0,0.315508219416257,0,0.646270193198397,0,0.222798674082394,0.283076530788832,0.404810701674894,0.584511715822624,0.395287777946524,2.89189184779626,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0.36012218806262,0.646793418913773,0.428674070063185,0.354680467284547,0.535106452806212,0.822745103010605,0.304464949114599,0,0,0,0,0,0,0,0,0,1.11255181206306,0,0.206386867963223,0,0,0,0,0,0,0,0,0.474503990371703,0,0,0,0,0,0,0,0,0,15.2197093444731,0,0,0,0,0,0,0,0,0.483168241652012,6.91272015018877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3885110557024,3.68260189205742,5.15605962095457,2.92150409984269,2.05524755931193,2.2661816921691,0.675022500231806,3.15224842256954,2.71885445390523,5.1776031175182,1.97195960409936,7.58147259461959,2.90247129782028,1.70174701947806,2.09613162627982,2.38996560985018,1.55572709461131,1.23621034343337,1.60459604795908,1.01078884705519,1.77435509923168,1.32038438970253,0.936415074698824,1.34452820050225,1.14870937911227,0.476293691283074,1.0429589335037,1.92909220463705,0.824171801606613,1.17759136107518,1.37147700954166,1.4198064492747,0.715308569841963,1.16277133305863,1.2234219453993,1.4384483341585,2.0122077016005,2.89376682581627,2.03706170768793,1.12228454331548,1.54225523561426,1.0835493061312,0.409231043169689,0.619747364743864,1.73615949883027,4.49659040288303,0.935726433781634,1.71896843238639,0.191288332068843,0.220591419119515,0 | |||
|short_description=p5@Scrt1 | |||
}} |
Latest revision as of 00:49, 27 September 2015
Short description: | p5@Scrt1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Scrt1_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | -181bp_to_ENSMUST00000096365, NM_130893, uc007wko.1_5end |
EntrezGene: | Scrt1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.20e-25 | 23 |
neuroblast (sensu Vertebrata) | 7.20e-25 | 23 |
neuron | 6.00e-15 | 33 |
neuronal stem cell | 6.00e-15 | 33 |
neuroblast | 6.00e-15 | 33 |
electrically signaling cell | 6.00e-15 | 33 |
electrically responsive cell | 1.65e-11 | 39 |
electrically active cell | 1.65e-11 | 39 |
neural cell | 8.87e-10 | 43 |
ectodermal cell | 2.13e-09 | 44 |
neurectodermal cell | 2.13e-09 | 44 |
neuron of cerebral cortex | 8.46e-09 | 6 |