FFCP PHASE1:Hg19::chr5:138629628..138629688,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9782 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6912 | |||
|TSSclassifier=strong | |||
|UniProt=D6R9F3,D6RIA2 | |||
|association_with_transcript=0bp_to_ENST00000504643,ENST00000508689,ENST00000514528_5end | |||
|cluster_id=chr5:138629628..138629688,+ | |||
|coexpression_cluster_id=C2804 | |||
|description=CAGE_peak_2_at_MATR3_5end | |||
|id=chr5:138629628..138629688,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.18e-17!140;CL:0000037!6.90e-17!172;CL:0000566!6.90e-17!172;CL:0002031!8.30e-16!124;CL:0002032!3.24e-15!165;CL:0000837!3.24e-15!165;CL:0000988!4.57e-15!182;CL:0002087!2.13e-14!119;CL:0000766!1.64e-09!76;CL:0000557!1.67e-09!71;CL:0000839!2.60e-09!70;CL:0000763!5.41e-09!112;CL:0000049!5.41e-09!112;CL:0002009!1.63e-08!65;CL:0002194!7.87e-08!63;CL:0000576!7.87e-08!63;CL:0000040!7.87e-08!63;CL:0000559!7.87e-08!63;CL:0002057!1.30e-07!42;CL:0000860!2.41e-07!45;CL:0000542!8.56e-07!53;CL:0000051!8.56e-07!53 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,8.59e-18,136;CL:0000037,3.43e-17,168;CL:0002031,3.13e-16,120;CL:0000988,7.37e-16,177;CL:0002032,1.67e-15,161;CL:0000837,1.67e-15,161;CL:0002087,8.45e-15,115;CL:0000557,5.87e-10,67;CL:0000766,6.21e-10,72;CL:0000839,9.19e-10,66;CL:0000763,2.99e-09,108;CL:0000049,2.99e-09,108;CL:0002009,5.90e-09,61;CL:0002194,3.04e-08,59;CL:0000576,3.04e-08,59;CL:0000040,3.04e-08,59;CL:0000559,3.04e-08,59;CL:0000860,1.30e-07,42;CL:0002057,1.30e-07,42;CL:0000473,1.96e-07,48;CL:0000234,1.96e-07,48;CL:0000542,8.56e-07,53;CL:0000051,8.56e-07,53 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.64e-28!82;UBERON:0000073!1.03e-27!94;UBERON:0001016!1.03e-27!94;UBERON:0005743!2.05e-27!86;UBERON:0001049!6.64e-24!57;UBERON:0005068!6.64e-24!57;UBERON:0006241!6.64e-24!57;UBERON:0007135!6.64e-24!57;UBERON:0002780!1.54e-22!41;UBERON:0001890!1.54e-22!41;UBERON:0006240!1.54e-22!41;UBERON:0000955!1.29e-21!69;UBERON:0006238!1.29e-21!69;UBERON:0003080!2.15e-21!42;UBERON:0002616!2.51e-20!59;UBERON:0002020!5.75e-19!34;UBERON:0003528!5.75e-19!34;UBERON:0001893!7.04e-19!34;UBERON:0002791!3.02e-18!33;UBERON:0001869!4.79e-18!32;UBERON:0003075!4.21e-15!86;UBERON:0007284!4.21e-15!86;UBERON:0002619!6.51e-15!22;UBERON:0002346!2.12e-14!90;UBERON:0001950!9.63e-14!20;UBERON:0000956!9.64e-14!25;UBERON:0000203!9.64e-14!25;UBERON:0003056!1.63e-13!61;UBERON:0002390!8.00e-10!102;UBERON:0003061!8.00e-10!102;UBERON:0002371!1.68e-08!80;UBERON:0001474!1.98e-08!86;UBERON:0002193!4.51e-08!112;UBERON:0004121!8.77e-08!169;UBERON:0000924!1.39e-07!173;UBERON:0006601!1.39e-07!173;UBERON:0007023!3.59e-07!115;UBERON:0004765!4.90e-07!101;UBERON:0001434!4.90e-07!101;UBERON:0000033!5.35e-07!123;UBERON:0002420!5.96e-07!9;UBERON:0007245!5.96e-07!9;UBERON:0010009!5.96e-07!9;UBERON:0010011!5.96e-07!9;UBERON:0000454!5.96e-07!9;UBERON:0000153!7.54e-07!129;UBERON:0007811!7.54e-07!129;UBERON:0002308!9.91e-07!9;UBERON:0000125!9.91e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;2.75e-16;34!UBERON:0002020;2.75e-16;34!UBERON:0001869;2.91e-16;32!UBERON:0002780;3.25e-16;41!UBERON:0001890;3.25e-16;41!UBERON:0001893;3.32e-16;34!UBERON:0002791;3.69e-16;32!UBERON:0002619;6.51e-15;22!UBERON:0000073;5.15e-14;53!UBERON:0002616;5.15e-14;53!UBERON:0000956;9.51e-14;25!UBERON:0000203;9.51e-14;25!UBERON:0001950;9.63e-14;20!UBERON:0001017;5.95e-11;75!UBERON:0000955;9.21e-11;68!UBERON:0001016;2.03e-10;83!UBERON:0002420;5.77e-07;9!UBERON:0007245;5.77e-07;9!UBERON:0010009;5.77e-07;9!UBERON:0010011;5.77e-07;9!UBERON:0000454;5.77e-07;9!UBERON:0000125;9.64e-07;9!UBERON:0002308;9.64e-07;9 | |||
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| |||
|short_description=p2@MATR3 | |||
}} |
Latest revision as of 23:54, 24 September 2015
Short description: | p2@MATR3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MATR3_5end |
Coexpression cluster: | C2804_parietal_Mast_Neurons_occipital_Neural_Fibroblast_pineal |
Association with transcript: | 0bp_to_ENST00000504643, ENST00000508689, ENST00000514528_5end |
EntrezGene: | MATR3 |
HGNC: | 6912 |
UniProt: | D6R9F3D6RIA2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 8.59e-18 | 136 |
hematopoietic stem cell | 3.43e-17 | 168 |
hematopoietic lineage restricted progenitor cell | 3.13e-16 | 120 |
hematopoietic cell | 7.37e-16 | 177 |
hematopoietic oligopotent progenitor cell | 1.67e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.67e-15 | 161 |
nongranular leukocyte | 8.45e-15 | 115 |
granulocyte monocyte progenitor cell | 5.87e-10 | 67 |
myeloid leukocyte | 6.21e-10 | 72 |
myeloid lineage restricted progenitor cell | 9.19e-10 | 66 |
myeloid cell | 2.99e-09 | 108 |
common myeloid progenitor | 2.99e-09 | 108 |
macrophage dendritic cell progenitor | 5.90e-09 | 61 |
monopoietic cell | 3.04e-08 | 59 |
monocyte | 3.04e-08 | 59 |
monoblast | 3.04e-08 | 59 |
promonocyte | 3.04e-08 | 59 |
classical monocyte | 1.30e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.30e-07 | 42 |
defensive cell | 1.96e-07 | 48 |
phagocyte | 1.96e-07 | 48 |
lymphocyte | 8.56e-07 | 53 |
common lymphoid progenitor | 8.56e-07 | 53 |