FFCP PHASE1:Mm9::chr18:31476792..31476803,-: Difference between revisions
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{{FFCP|EntrezGene=19762|HGNC=|MCL_coexpression_id=20|UniProt=P70425|association_with_transcript=-5bp_to_ENSMUST00000153060_5end|description=CAGE_peak_5_at_Rit2_5end|id=chr18:31476792..31476803,-|ontology_enrichment_celltype=CL:0000117!2.28e-12!23;CL:0000337!2.28e-12!23;CL:0000540!5.97e-08!33;CL:0000047!5.97e-08!33;CL:0000031!5.97e-08!33;CL:0000404!5.97e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,2.37e-13,23;CL:0000337,2.37e-13,23;CL:0002610,5.08e-10,3;CL:0002614,6.22e-10,3;CL:0002612,6.54e-09,3;CL:0000540,1.21e-08,33;CL:0000047,1.21e-08,33;CL:0000031,1.21e-08,33;CL:0000404,1.21e-08,33;CL:0000393,5.50e-07,39;CL:0000211,5.50e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.53e-23!52;UBERON:0005068!2.53e-23!52;UBERON:0006241!2.53e-23!52;UBERON:0007135!2.53e-23!52;UBERON:0002346!1.07e-22!71;UBERON:0003075!1.07e-22!71;UBERON:0007284!1.07e-22!71;UBERON:0000073!6.26e-22!75;UBERON:0001016!6.26e-22!75;UBERON:0001017!9.37e-22!73;UBERON:0005743!9.37e-22!73;UBERON:0000033!9.45e-22!63;UBERON:0000955!2.16e-21!50;UBERON:0006238!2.16e-21!50;UBERON:0002616!1.69e-20!49;UBERON:0004121!1.04e-18!102;UBERON:0000924!1.04e-18!102;UBERON:0006601!1.04e-18!102;UBERON:0002020!1.37e-18!34;UBERON:0003056!7.16e-17!49;UBERON:0003080!2.57e-14!40;UBERON:0002791!1.36e-13!29;UBERON:0003528!1.36e-13!29;UBERON:0001893!1.36e-13!29;UBERON:0002780!2.70e-13!39;UBERON:0001890!2.70e-13!39;UBERON:0006240!2.70e-13!39;UBERON:0007811!1.42e-12!86;UBERON:0000153!1.70e-10!94;UBERON:0003076!2.49e-10!12;UBERON:0003057!2.49e-10!12;UBERON:0002420!1.28e-09!8;UBERON:0007245!1.28e-09!8;UBERON:0010009!1.28e-09!8;UBERON:0010011!1.28e-09!8;UBERON:0000454!1.28e-09!8;UBERON:0002298!4.80e-09!6;UBERON:0002021!1.41e-08!10;UBERON:0000411!1.41e-08!10;UBERON:0001950!1.41e-08!10;UBERON:0002240!4.02e-08!6;UBERON:0005174!4.02e-08!6;UBERON:0001137!4.02e-08!6;UBERON:0001948!6.99e-07!5;UBERON:0002315!6.99e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.09e-34,54;UBERON:0001049,1.40e-29,52;UBERON:0005068,1.40e-29,52;UBERON:0006241,1.40e-29,52;UBERON:0007135,1.40e-29,52;UBERON:0002346,2.65e-27,64;UBERON:0003075,2.65e-27,64;UBERON:0007284,2.65e-27,64;UBERON:0001017,6.43e-26,73;UBERON:0001016,4.43e-25,75;UBERON:0010371,2.85e-23,73;UBERON:0003076,1.84e-22,12;UBERON:0003057,1.84e-22,12;UBERON:0004121,6.91e-22,95;UBERON:0000924,6.91e-22,95;UBERON:0006601,6.91e-22,95;UBERON:0002020,6.01e-20,34;UBERON:0002616,1.13e-18,46;UBERON:0000955,3.45e-18,47;UBERON:0006238,3.45e-18,47;UBERON:0010314,2.42e-17,92;UBERON:0002240,2.62e-16,6;UBERON:0005174,2.62e-16,6;UBERON:0001137,2.62e-16,6;UBERON:0001948,1.57e-13,5;UBERON:0002315,1.57e-13,5;UBERON:0003056,5.61e-13,49;UBERON:0003080,7.51e-13,40;UBERON:0002950,8.38e-13,4;UBERON:0001891,8.38e-13,4;UBERON:0009616,8.38e-13,4;UBERON:0010286,8.38e-13,4;UBERON:0003528,1.75e-11,29;UBERON:0002791,1.75e-11,29;UBERON:0001893,1.75e-11,29;UBERON:0002780,2.83e-11,39;UBERON:0001890,2.83e-11,39;UBERON:0006240,2.83e-11,39;UBERON:0000025,1.18e-10,114;UBERON:0004684,5.08e-10,3;UBERON:0002275,5.08e-10,3;UBERON:0002038,6.22e-10,3;UBERON:0009663,6.22e-10,3;UBERON:0009661,6.22e-10,3;UBERON:0000125,6.22e-10,3;UBERON:0002308,6.22e-10,3;UBERON:0004111,1.30e-09,122;UBERON:0002021,5.34e-09,10;UBERON:0000411,5.34e-09,10;UBERON:0001950,5.34e-09,10;UBERON:0002257,6.54e-09,3;UBERON:0004733,2.23e-08,6;UBERON:0004732,2.23e-08,6;UBERON:0002028,2.23e-08,6;UBERON:0007277,2.23e-08,6;UBERON:0001896,3.37e-07,2;UBERON:0002298,3.37e-07,2;UBERON:0005290,3.37e-07,2;UBERON:0010096,3.37e-07,2;UBERON:0000956,5.75e-07,21;UBERON:0001869,5.75e-07,21;UBERON:0000203,5.75e-07,21;UBERON:0002619,7.64e-07,17|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0,0,0,0,0,0,0,0,0,0.135005938331691,0,1.14260393761521,2.65042249141936,0,0,0,8.8092704799511,4.59674417106676,3.07213066512487,0.263772575460388,0.731901148819277,0.52091337055676,5.30447698102624,3.93933827022176,3.20876320331301,3.53554302568401,2.42031857358475,1.3047961207771,0,0.226714680320357,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51336956413857,3.56059401582874,0,0,0,0,5.24267237916879,2.74500361691176,0.628271760564322,1.73824320192276,2.55715457330331,4.36354893575076,2.75810147215188,0,0,0,1.05220927943237,0,0,0.180062129805349,0,0.136072998302656,0.2562274405697,0.374806898238915,2.32833033665114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.73376933133365,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.53211297973142,5.27452589664914,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,4.07935664423121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=19762 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|TSSclassifier=NA | |||
|UniProt=P70425 | |||
|association_with_transcript=-5bp_to_ENSMUST00000153060_5end | |||
|cluster_id=chr18:31476792..31476803,- | |||
|description=CAGE_peak_5_at_Rit2_5end | |||
|id=chr18:31476792..31476803,- | |||
|ontology_enrichment_celltype=CL:0000117!2.28e-12!23;CL:0000337!2.28e-12!23;CL:0000540!5.97e-08!33;CL:0000047!5.97e-08!33;CL:0000031!5.97e-08!33;CL:0000404!5.97e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.37e-13,23;CL:0000337,2.37e-13,23;CL:0002610,5.08e-10,3;CL:0002614,6.22e-10,3;CL:0002612,6.54e-09,3;CL:0000540,1.21e-08,33;CL:0000047,1.21e-08,33;CL:0000031,1.21e-08,33;CL:0000404,1.21e-08,33;CL:0000393,5.50e-07,39;CL:0000211,5.50e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.53e-23!52;UBERON:0005068!2.53e-23!52;UBERON:0006241!2.53e-23!52;UBERON:0007135!2.53e-23!52;UBERON:0002346!1.07e-22!71;UBERON:0003075!1.07e-22!71;UBERON:0007284!1.07e-22!71;UBERON:0000073!6.26e-22!75;UBERON:0001016!6.26e-22!75;UBERON:0001017!9.37e-22!73;UBERON:0005743!9.37e-22!73;UBERON:0000033!9.45e-22!63;UBERON:0000955!2.16e-21!50;UBERON:0006238!2.16e-21!50;UBERON:0002616!1.69e-20!49;UBERON:0004121!1.04e-18!102;UBERON:0000924!1.04e-18!102;UBERON:0006601!1.04e-18!102;UBERON:0002020!1.37e-18!34;UBERON:0003056!7.16e-17!49;UBERON:0003080!2.57e-14!40;UBERON:0002791!1.36e-13!29;UBERON:0003528!1.36e-13!29;UBERON:0001893!1.36e-13!29;UBERON:0002780!2.70e-13!39;UBERON:0001890!2.70e-13!39;UBERON:0006240!2.70e-13!39;UBERON:0007811!1.42e-12!86;UBERON:0000153!1.70e-10!94;UBERON:0003076!2.49e-10!12;UBERON:0003057!2.49e-10!12;UBERON:0002420!1.28e-09!8;UBERON:0007245!1.28e-09!8;UBERON:0010009!1.28e-09!8;UBERON:0010011!1.28e-09!8;UBERON:0000454!1.28e-09!8;UBERON:0002298!4.80e-09!6;UBERON:0002021!1.41e-08!10;UBERON:0000411!1.41e-08!10;UBERON:0001950!1.41e-08!10;UBERON:0002240!4.02e-08!6;UBERON:0005174!4.02e-08!6;UBERON:0001137!4.02e-08!6;UBERON:0001948!6.99e-07!5;UBERON:0002315!6.99e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.09e-34,54;UBERON:0001049,1.40e-29,52;UBERON:0005068,1.40e-29,52;UBERON:0006241,1.40e-29,52;UBERON:0007135,1.40e-29,52;UBERON:0002346,2.65e-27,64;UBERON:0003075,2.65e-27,64;UBERON:0007284,2.65e-27,64;UBERON:0001017,6.43e-26,73;UBERON:0001016,4.43e-25,75;UBERON:0010371,2.85e-23,73;UBERON:0003076,1.84e-22,12;UBERON:0003057,1.84e-22,12;UBERON:0004121,6.91e-22,95;UBERON:0000924,6.91e-22,95;UBERON:0006601,6.91e-22,95;UBERON:0002020,6.01e-20,34;UBERON:0002616,1.13e-18,46;UBERON:0000955,3.45e-18,47;UBERON:0006238,3.45e-18,47;UBERON:0010314,2.42e-17,92;UBERON:0002240,2.62e-16,6;UBERON:0005174,2.62e-16,6;UBERON:0001137,2.62e-16,6;UBERON:0001948,1.57e-13,5;UBERON:0002315,1.57e-13,5;UBERON:0003056,5.61e-13,49;UBERON:0003080,7.51e-13,40;UBERON:0002950,8.38e-13,4;UBERON:0001891,8.38e-13,4;UBERON:0009616,8.38e-13,4;UBERON:0010286,8.38e-13,4;UBERON:0003528,1.75e-11,29;UBERON:0002791,1.75e-11,29;UBERON:0001893,1.75e-11,29;UBERON:0002780,2.83e-11,39;UBERON:0001890,2.83e-11,39;UBERON:0006240,2.83e-11,39;UBERON:0000025,1.18e-10,114;UBERON:0004684,5.08e-10,3;UBERON:0002275,5.08e-10,3;UBERON:0002038,6.22e-10,3;UBERON:0009663,6.22e-10,3;UBERON:0009661,6.22e-10,3;UBERON:0000125,6.22e-10,3;UBERON:0002308,6.22e-10,3;UBERON:0004111,1.30e-09,122;UBERON:0002021,5.34e-09,10;UBERON:0000411,5.34e-09,10;UBERON:0001950,5.34e-09,10;UBERON:0002257,6.54e-09,3;UBERON:0004733,2.23e-08,6;UBERON:0004732,2.23e-08,6;UBERON:0002028,2.23e-08,6;UBERON:0007277,2.23e-08,6;UBERON:0001896,3.37e-07,2;UBERON:0002298,3.37e-07,2;UBERON:0005290,3.37e-07,2;UBERON:0010096,3.37e-07,2;UBERON:0000956,5.75e-07,21;UBERON:0001869,5.75e-07,21;UBERON:0000203,5.75e-07,21;UBERON:0002619,7.64e-07,17 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0,0,0,0,0,0,0,0,0,0.135005938331691,0,1.14260393761521,2.65042249141936,0,0,0,8.8092704799511,4.59674417106676,3.07213066512487,0.263772575460388,0.731901148819277,0.52091337055676,5.30447698102624,3.93933827022176,3.20876320331301,3.53554302568401,2.42031857358475,1.3047961207771,0,0.226714680320357,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51336956413857,3.56059401582874,0,0,0,0,5.24267237916879,2.74500361691176,0.628271760564322,1.73824320192276,2.55715457330331,4.36354893575076,2.75810147215188,0,0,0,1.05220927943237,0,0,0.180062129805349,0,0.136072998302656,0.2562274405697,0.374806898238915,2.32833033665114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.73376933133365,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.53211297973142,5.27452589664914,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,4.07935664423121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0.214368379079066,0,1.12950368523413,1.38097570952153,0.572895513439397,0.171853182343688,1.37016503954128,0,2.70009000092722,2.2516060161211,1.35942722695261,0.51776031175182,0.103787347584177,0,0,0,0,0,0.44449345560323,0,0,0.505394423527595,0.25347929989024,0.188626341386076,0.561849044819294,0.256100609619477,0.287177344778066,0,0.347652977834566,0.192909220463705,0.412085900803307,0,0.685738504770831,0,0.238436189947321,0.581385666529314,0.282328141245992,0.25384382367503,0.182927972872773,0,0.271608227691724,0.561142271657738,0.118635018124174,0.197008964751127,0,0.619747364743864,0.192906610981141,0.249810577937946,0.467863216890817,0,0,0.220591419119515,0 | |||
|short_description=p5@Rit2 | |||
}} |
Latest revision as of 03:16, 27 September 2015
Short description: | p5@Rit2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Rit2_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | -5bp_to_ENSMUST00000153060_5end |
EntrezGene: | Rit2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.37e-13 | 23 |
neuroblast (sensu Vertebrata) | 2.37e-13 | 23 |
raphe nuclei neuron | 5.08e-10 | 3 |
neuron of the substantia nigra | 6.22e-10 | 3 |
neuron of the ventral spinal cord | 6.54e-09 | 3 |
neuron | 1.21e-08 | 33 |
neuronal stem cell | 1.21e-08 | 33 |
neuroblast | 1.21e-08 | 33 |
electrically signaling cell | 1.21e-08 | 33 |
electrically responsive cell | 5.50e-07 | 39 |
electrically active cell | 5.50e-07 | 39 |