FFCP PHASE1:Mm9::chr18:61173819..61173834,-: Difference between revisions
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{{FFCP|EntrezGene=240332|HGNC=|MCL_coexpression_id=2|UniProt=Q6PGE7|association_with_transcript=18bp_to_ENSMUST00000025520,NM_201353,uc008fbi.1_5end|description=CAGE_peak_3_at_Slc6a7_5end|id=chr18:61173819..61173834,-|ontology_enrichment_celltype=CL:0000117!3.51e-09!23;CL:0000337!3.51e-09!23;CL:0000540!1.23e-07!33;CL:0000047!1.23e-07!33;CL:0000031!1.23e-07!33;CL:0000404!1.23e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,1.28e-16,23;CL:0000337,1.28e-16,23;CL:0000540,1.16e-10,33;CL:0000047,1.16e-10,33;CL:0000031,1.16e-10,33;CL:0000404,1.16e-10,33;CL:0000393,1.45e-08,39;CL:0000211,1.45e-08,39;CL:0002614,1.31e-07,3;CL:0002319,1.68e-07,43;CL:0002610,1.71e-07,3;CL:0000221,2.89e-07,44;CL:0000133,2.89e-07,44;CL:0002613,3.21e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!2.01e-15!34;UBERON:0001017!2.06e-15!73;UBERON:0005743!2.06e-15!73;UBERON:0000073!1.57e-14!75;UBERON:0001016!1.57e-14!75;UBERON:0001049!6.33e-14!52;UBERON:0005068!6.33e-14!52;UBERON:0006241!6.33e-14!52;UBERON:0007135!6.33e-14!52;UBERON:0000955!6.68e-13!50;UBERON:0006238!6.68e-13!50;UBERON:0002616!3.77e-12!49;UBERON:0002791!8.27e-12!29;UBERON:0003528!8.27e-12!29;UBERON:0001893!8.27e-12!29;UBERON:0002021!9.24e-11!10;UBERON:0000411!9.24e-11!10;UBERON:0001950!9.24e-11!10;UBERON:0003080!4.82e-10!40;UBERON:0004121!5.61e-10!102;UBERON:0000924!5.61e-10!102;UBERON:0006601!5.61e-10!102;UBERON:0000033!1.72e-09!63;UBERON:0002780!2.18e-09!39;UBERON:0001890!2.18e-09!39;UBERON:0006240!2.18e-09!39;UBERON:0007811!7.32e-09!86;UBERON:0002346!2.19e-08!71;UBERON:0003075!2.19e-08!71;UBERON:0007284!2.19e-08!71;UBERON:0003056!2.82e-08!49;UBERON:0002619!6.55e-08!17;UBERON:0002420!4.56e-07!8;UBERON:0007245!4.56e-07!8;UBERON:0010009!4.56e-07!8;UBERON:0010011!4.56e-07!8;UBERON:0000454!4.56e-07!8;UBERON:0000153!6.61e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.44e-35,54;UBERON:0002020,7.54e-34,34;UBERON:0001049,4.94e-29,52;UBERON:0005068,4.94e-29,52;UBERON:0006241,4.94e-29,52;UBERON:0007135,4.94e-29,52;UBERON:0001017,3.37e-28,73;UBERON:0001016,2.91e-27,75;UBERON:0003528,3.32e-27,29;UBERON:0002791,3.32e-27,29;UBERON:0001893,3.32e-27,29;UBERON:0002021,1.09e-25,10;UBERON:0000411,1.09e-25,10;UBERON:0001950,1.09e-25,10;UBERON:0003080,1.36e-25,40;UBERON:0000955,1.77e-25,47;UBERON:0006238,1.77e-25,47;UBERON:0002780,7.98e-24,39;UBERON:0001890,7.98e-24,39;UBERON:0006240,7.98e-24,39;UBERON:0002616,1.26e-23,46;UBERON:0002346,2.03e-22,64;UBERON:0003075,2.03e-22,64;UBERON:0007284,2.03e-22,64;UBERON:0004121,1.23e-21,95;UBERON:0000924,1.23e-21,95;UBERON:0006601,1.23e-21,95;UBERON:0010371,1.45e-20,73;UBERON:0003056,6.48e-20,49;UBERON:0002619,4.02e-17,17;UBERON:0000956,5.12e-16,21;UBERON:0001869,5.12e-16,21;UBERON:0000203,5.12e-16,21;UBERON:0010314,1.06e-13,92;UBERON:0002420,6.42e-13,8;UBERON:0007245,6.42e-13,8;UBERON:0010009,6.42e-13,8;UBERON:0010011,6.42e-13,8;UBERON:0000454,6.42e-13,8;UBERON:0000025,7.27e-10,114;UBERON:0002950,1.04e-09,4;UBERON:0001891,1.04e-09,4;UBERON:0009616,1.04e-09,4;UBERON:0010286,1.04e-09,4;UBERON:0004111,8.12e-09,122;UBERON:0001948,9.03e-08,5;UBERON:0002315,9.03e-08,5;UBERON:0011216,1.29e-07,194;UBERON:0002038,1.31e-07,3;UBERON:0009663,1.31e-07,3;UBERON:0009661,1.31e-07,3;UBERON:0000125,1.31e-07,3;UBERON:0002308,1.31e-07,3;UBERON:0004684,1.71e-07,3;UBERON:0002275,1.71e-07,3;UBERON:0000369,3.93e-07,5;UBERON:0002435,3.93e-07,5;UBERON:0000204,3.93e-07,5;UBERON:0010082,3.93e-07,5|phase1_expression=0,0,0,0,0,1.17515490338323,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0.159992422793407,0,0,1.29228598847722,0,0,0,0.886922042621219,0,0,0,0,0,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.85960031981627,0,0.606949382578793,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0,0,0,0,4.57041575046086,3.09215957332259,0.122490799214954,0,0,1.10115880999389,3.19218345212969,2.76491759861238,1.18697658957174,1.28082701043374,1.56274011167028,1.67509799400829,2.8138130501584,2.29197371665215,1.17851434189467,2.27794689278565,0.745597783301202,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.628340120440365,0.255457055208591,0,0,0,3.14560342750128,0.457500602818626,1.00523481690292,4.69325664519146,5.37002460393694,3.74018480207208,3.40706652442291,0.101839363850316,0.124406970610093,0,0,0,0,0,0,0.0680364991513279,0.12811372028485,0,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162137619091711,0.292399974850665,0.219550115291051,0.134206418760372,3.15434922846191,0.617427674275707,0,0,0,0,0.128867461322093,0.80673409849337,0.22237804384487,0.190225626112559,0.949058123089023,0.329397909448022,1.00534083520108,0.596869416123452,0.19496408711912,0,0.432276099749388,0.398282546508734,0,0,1.1270773567308,0,0,0.0701358198903186,0,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0.275936746304732,1.12385412991454,0.93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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=240332 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=Q6PGE7 | |||
|association_with_transcript=18bp_to_ENSMUST00000025520,NM_201353,uc008fbi.1_5end | |||
|cluster_id=chr18:61173819..61173834,- | |||
|description=CAGE_peak_3_at_Slc6a7_5end | |||
|id=chr18:61173819..61173834,- | |||
|ontology_enrichment_celltype=CL:0000117!3.51e-09!23;CL:0000337!3.51e-09!23;CL:0000540!1.23e-07!33;CL:0000047!1.23e-07!33;CL:0000031!1.23e-07!33;CL:0000404!1.23e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.28e-16,23;CL:0000337,1.28e-16,23;CL:0000540,1.16e-10,33;CL:0000047,1.16e-10,33;CL:0000031,1.16e-10,33;CL:0000404,1.16e-10,33;CL:0000393,1.45e-08,39;CL:0000211,1.45e-08,39;CL:0002614,1.31e-07,3;CL:0002319,1.68e-07,43;CL:0002610,1.71e-07,3;CL:0000221,2.89e-07,44;CL:0000133,2.89e-07,44;CL:0002613,3.21e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!2.01e-15!34;UBERON:0001017!2.06e-15!73;UBERON:0005743!2.06e-15!73;UBERON:0000073!1.57e-14!75;UBERON:0001016!1.57e-14!75;UBERON:0001049!6.33e-14!52;UBERON:0005068!6.33e-14!52;UBERON:0006241!6.33e-14!52;UBERON:0007135!6.33e-14!52;UBERON:0000955!6.68e-13!50;UBERON:0006238!6.68e-13!50;UBERON:0002616!3.77e-12!49;UBERON:0002791!8.27e-12!29;UBERON:0003528!8.27e-12!29;UBERON:0001893!8.27e-12!29;UBERON:0002021!9.24e-11!10;UBERON:0000411!9.24e-11!10;UBERON:0001950!9.24e-11!10;UBERON:0003080!4.82e-10!40;UBERON:0004121!5.61e-10!102;UBERON:0000924!5.61e-10!102;UBERON:0006601!5.61e-10!102;UBERON:0000033!1.72e-09!63;UBERON:0002780!2.18e-09!39;UBERON:0001890!2.18e-09!39;UBERON:0006240!2.18e-09!39;UBERON:0007811!7.32e-09!86;UBERON:0002346!2.19e-08!71;UBERON:0003075!2.19e-08!71;UBERON:0007284!2.19e-08!71;UBERON:0003056!2.82e-08!49;UBERON:0002619!6.55e-08!17;UBERON:0002420!4.56e-07!8;UBERON:0007245!4.56e-07!8;UBERON:0010009!4.56e-07!8;UBERON:0010011!4.56e-07!8;UBERON:0000454!4.56e-07!8;UBERON:0000153!6.61e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.44e-35,54;UBERON:0002020,7.54e-34,34;UBERON:0001049,4.94e-29,52;UBERON:0005068,4.94e-29,52;UBERON:0006241,4.94e-29,52;UBERON:0007135,4.94e-29,52;UBERON:0001017,3.37e-28,73;UBERON:0001016,2.91e-27,75;UBERON:0003528,3.32e-27,29;UBERON:0002791,3.32e-27,29;UBERON:0001893,3.32e-27,29;UBERON:0002021,1.09e-25,10;UBERON:0000411,1.09e-25,10;UBERON:0001950,1.09e-25,10;UBERON:0003080,1.36e-25,40;UBERON:0000955,1.77e-25,47;UBERON:0006238,1.77e-25,47;UBERON:0002780,7.98e-24,39;UBERON:0001890,7.98e-24,39;UBERON:0006240,7.98e-24,39;UBERON:0002616,1.26e-23,46;UBERON:0002346,2.03e-22,64;UBERON:0003075,2.03e-22,64;UBERON:0007284,2.03e-22,64;UBERON:0004121,1.23e-21,95;UBERON:0000924,1.23e-21,95;UBERON:0006601,1.23e-21,95;UBERON:0010371,1.45e-20,73;UBERON:0003056,6.48e-20,49;UBERON:0002619,4.02e-17,17;UBERON:0000956,5.12e-16,21;UBERON:0001869,5.12e-16,21;UBERON:0000203,5.12e-16,21;UBERON:0010314,1.06e-13,92;UBERON:0002420,6.42e-13,8;UBERON:0007245,6.42e-13,8;UBERON:0010009,6.42e-13,8;UBERON:0010011,6.42e-13,8;UBERON:0000454,6.42e-13,8;UBERON:0000025,7.27e-10,114;UBERON:0002950,1.04e-09,4;UBERON:0001891,1.04e-09,4;UBERON:0009616,1.04e-09,4;UBERON:0010286,1.04e-09,4;UBERON:0004111,8.12e-09,122;UBERON:0001948,9.03e-08,5;UBERON:0002315,9.03e-08,5;UBERON:0011216,1.29e-07,194;UBERON:0002038,1.31e-07,3;UBERON:0009663,1.31e-07,3;UBERON:0009661,1.31e-07,3;UBERON:0000125,1.31e-07,3;UBERON:0002308,1.31e-07,3;UBERON:0004684,1.71e-07,3;UBERON:0002275,1.71e-07,3;UBERON:0000369,3.93e-07,5;UBERON:0002435,3.93e-07,5;UBERON:0000204,3.93e-07,5;UBERON:0010082,3.93e-07,5 | |||
|phase1_expression=0,0,0,0,0,1.17515490338323,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0.159992422793407,0,0,1.29228598847722,0,0,0,0.886922042621219,0,0,0,0,0,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.85960031981627,0,0.606949382578793,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0,0,0,0,4.57041575046086,3.09215957332259,0.122490799214954,0,0,1.10115880999389,3.19218345212969,2.76491759861238,1.18697658957174,1.28082701043374,1.56274011167028,1.67509799400829,2.8138130501584,2.29197371665215,1.17851434189467,2.27794689278565,0.745597783301202,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.628340120440365,0.255457055208591,0,0,0,3.14560342750128,0.457500602818626,1.00523481690292,4.69325664519146,5.37002460393694,3.74018480207208,3.40706652442291,0.101839363850316,0.124406970610093,0,0,0,0,0,0,0.0680364991513279,0.12811372028485,0,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162137619091711,0.292399974850665,0.219550115291051,0.134206418760372,3.15434922846191,0.617427674275707,0,0,0,0,0.128867461322093,0.80673409849337,0.22237804384487,0.190225626112559,0.949058123089023,0.329397909448022,1.00534083520108,0.596869416123452,0.19496408711912,0,0.432276099749388,0.398282546508734,0,0,1.1270773567308,0,0,0.0701358198903186,0,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0.275936746304732,1.12385412991454,0.937693492737625,0,0,0,0,0,0.477937595905104,0.445597348164788,0.849229592366497,0,0.292255857911312,0,5.46246237917072,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,2.14352128823924,0,0.0603129249281559,0,0.164140899745061,0.582961673259701,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.388844919875379,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0.316011120628178,0,0,0.51968329191118,0.179026695667481,0,0.120195449519969,0.147689527174577,0.100966449948148,0.228620419965,0.403304740547362,0.974578807397524,0.192423683280659,0.116876902181569,0,0,0,0,0,0.563047426353546,0,0,0,11.2950368523413,9.66682996665071,6.30185064783336,8.59265911718438,4.7955776383945,5.2877572817279,6.07520250208625,4.95353323546643,4.53142408984205,5.1776031175182,0,0,0,0,0.209613162627982,0.367687016900028,0.222246727801615,0.618105171716683,0.320919209591815,0.505394423527595,0,0.377252682772152,0.187283014939765,0.256100609619477,0.287177344778066,0.476293691283074,0.115884325944855,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0,0.581385666529314,0.282328141245992,0.338458431566706,0.182927972872773,0.263069711437843,0.271608227691724,0,0.237270036248348,0.29551344712669,0.409231043169689,0.154936841185966,0,0.249810577937946,0,0,0,0,0 | |||
|short_description=p3@Slc6a7 | |||
}} |
Latest revision as of 13:47, 1 October 2015
Short description: | p3@Slc6a7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Slc6a7_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 18bp_to_ENSMUST00000025520, NM_201353, uc008fbi.1_5end |
EntrezGene: | Slc6a7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.28e-16 | 23 |
neuroblast (sensu Vertebrata) | 1.28e-16 | 23 |
neuron | 1.16e-10 | 33 |
neuronal stem cell | 1.16e-10 | 33 |
neuroblast | 1.16e-10 | 33 |
electrically signaling cell | 1.16e-10 | 33 |
electrically responsive cell | 1.45e-08 | 39 |
electrically active cell | 1.45e-08 | 39 |
neuron of the substantia nigra | 1.31e-07 | 3 |
neural cell | 1.68e-07 | 43 |
raphe nuclei neuron | 1.71e-07 | 3 |
ectodermal cell | 2.89e-07 | 44 |
neurectodermal cell | 2.89e-07 | 44 |
striatum neuron | 3.21e-07 | 3 |