FFCP PHASE1:Mm9::chr1:173612208..173612223,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=12506|HGNC=|MCL_coexpression_id=515|UniProt=P18181|association_with_transcript=22bp_to_NM_007649,uc007doz.1,uc007dpa.1_5end|description=CAGE_peak_2_at_Cd48_5end|id=chr1:173612208..173612223,+|ontology_enrichment_celltype=CL:0000988!8.41e-12!32;CL:0002032!8.41e-12!32;CL:0000037!8.41e-12!32;CL:0000566!8.41e-12!32;CL:0000837!8.41e-12!32;CL:0002031!3.92e-08!25;CL:0000838!5.55e-08!12;CL:0000542!1.35e-07!13;CL:0000051!1.35e-07!13;CL:0000084!2.32e-07!11;CL:0000827!2.32e-07!11;CL:0000738!4.84e-07!17;CL:0002087!4.84e-07!17|ontology_enrichment_celltype_v019_2=CL:0000988,2.54e-22,32;CL:0002032,2.54e-22,32;CL:0000037,2.54e-22,32;CL:0000837,2.54e-22,32;CL:0002031,4.00e-16,25;CL:0002320,4.03e-14,46;CL:0000134,4.03e-14,46;CL:0000838,7.09e-13,12;CL:0000738,5.61e-12,17;CL:0002087,5.61e-12,17;CL:0000049,8.11e-12,19;CL:0000084,8.73e-12,11;CL:0000827,8.73e-12,11;CL:0000542,1.31e-11,13;CL:0000051,1.31e-11,13;CL:0000219,9.66e-11,54;CL:0000791,1.31e-09,9;CL:0000789,1.31e-09,9;CL:0002420,1.31e-09,9;CL:0002419,1.31e-09,9;CL:0000790,1.31e-09,9;CL:0000624,1.49e-08,8;CL:0000763,1.86e-08,16;CL:0000553,1.06e-07,6;CL:0000556,1.06e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.60e-16!48;UBERON:0002405!1.28e-15!70;UBERON:0002390!7.42e-15!45;UBERON:0003061!7.42e-15!45;UBERON:0004177!1.14e-09!29;UBERON:0005057!6.08e-09!51;UBERON:0003081!1.07e-08!88;UBERON:0000926!3.02e-08!193;UBERON:0004120!3.02e-08!193;UBERON:0006603!3.02e-08!193;UBERON:0000077!6.14e-08!97;UBERON:0001041!1.88e-07!92;UBERON:0003408!3.73e-07!24;UBERON:0006562!4.29e-07!24;UBERON:0001557!4.29e-07!24;UBERON:0001042!4.29e-07!24;UBERON:0008814!4.29e-07!24;UBERON:0009145!4.29e-07!24;UBERON:0002370!5.38e-07!23;UBERON:0000974!5.38e-07!23;UBERON:0004807!5.38e-07!23;UBERON:0005058!5.38e-07!23;UBERON:0003351!5.38e-07!23;UBERON:0009113!5.38e-07!23;UBERON:0003295!5.38e-07!23;UBERON:0009722!5.38e-07!23;UBERON:0005562!5.38e-07!23;UBERON:0007690!5.38e-07!23;UBERON:0004119!9.63e-07!130;UBERON:0000925!9.63e-07!130;UBERON:0006595!9.63e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.05e-29,48;UBERON:0002405,3.05e-29,48;UBERON:0002390,2.95e-26,45;UBERON:0003061,2.95e-26,45;UBERON:0004177,1.50e-16,29;UBERON:0005057,1.50e-16,29;UBERON:0002384,4.03e-14,46;UBERON:0000077,1.15e-13,35;UBERON:0002370,8.49e-12,23;UBERON:0000974,8.49e-12,23;UBERON:0004807,8.49e-12,23;UBERON:0005058,8.49e-12,23;UBERON:0003351,8.49e-12,23;UBERON:0009113,8.49e-12,23;UBERON:0003295,8.49e-12,23;UBERON:0009722,8.49e-12,23;UBERON:0005562,8.49e-12,23;UBERON:0007690,8.49e-12,23;UBERON:0003081,2.23e-11,87;UBERON:0006562,4.35e-11,24;UBERON:0003408,4.35e-11,24;UBERON:0001557,4.35e-11,24;UBERON:0001042,4.35e-11,24;UBERON:0008814,4.35e-11,24;UBERON:0009145,4.35e-11,24;UBERON:0002371,3.71e-10,16;UBERON:0000926,2.42e-09,120;UBERON:0004120,2.42e-09,120;UBERON:0006603,2.42e-09,120;UBERON:0000072,2.75e-09,27;UBERON:0001474,7.48e-09,22;UBERON:0004765,7.48e-09,22;UBERON:0001434,7.48e-09,22;UBERON:0002204,6.62e-08,32;UBERON:0000065,6.14e-07,41|phase1_expression=0.160148847104794,0,0,0,0,0,0.233612640595526,11.3628524628587,1.97104211012333,3.04283884218592,1.36974374580404,1.11681022593471,4.10881751834894,3.75907730401689,1.99865857089398,3.03712901084739,3.49780939064073,7.88655413395594,8.36398044995006,5.51706547337439,0.17008658030214,5.95745707205312,5.22399578277871,1.43993180514066,2.75291137280604,0,0.430761996159075,0.215471232685889,0.190023419456374,1.00812051903972,0.665191531965914,0,0,0,0,0,0,2.51118978442145,9.37602413428561,6.28228492768558,0.588231488031014,0.683045484958446,1.94204141212461,0,0,0,0,0,0,0,0,0,5.36904339384756,3.62681071005672,4.7053131879945,0,0.286533439938757,0,0,0,0,0,0,3.1496490104849,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.68510327831436,10.0985774622397,1.1875371125186,0,0,0.230615497256059,0.150722640552623,0.23517741427141,0.125666591329675,0,0.433798070759735,3.5384422077995,0.970601099684455,1.54589062922275,0.969750506270444,0,0.292780797011547,0,1.27728527604296,16.6543023063229,15.5974710058286,16.1379188382792,0,0,0,0,0,0.20778804455956,0,0.203678727700633,2.23932547098167,0.758168275301024,0.420883711772948,0,0.229902104433473,0.180062129805349,0.30140963567143,0.0680364991513279,0.12811372028485,0,0,0,0,0,0,0.278047249225598,0.696504333044333,0,0.199034266818493,7.72434506044558,7.97778512055617,7.672414483681,0,0,0.36012412292203,0,0.196764231747404,0.154267112887378,0,0,0.116765342367169,0.16455984991348,0.164167464079095,0.243206428637567,0.438599962275997,1.75640092232841,0.805238512562231,0,0,0.991256348951394,0.264450566663544,0.213288250535234,0,0.128867461322093,0,0,0.190225626112559,1.42358718463353,0.164698954724011,0.502670417600539,0.397912944082302,0.779856348476481,0,0.432276099749388,0.398282546508734,0,0.228497025219458,1.1270773567308,0,0,0,0.0632365371242573,0.147610147979602,0,0.246794327843601,0.592905254174298,0.667380422864376,0.982794975566015,1.34917267430912,0.405720242777006,1.68824011826692,1.2731292589071,1.72617682470486,0.972811360650212,0.823684239564244,4.31304619582064,1.86070473834252,0.936113019343682,0.252578877947112,0.179397413521912,0,3.69506380333209,0.189491411770485,0.325929952884052,0,0.234690248288502,0.335012514883631,0.238043640886014,0.195133647857799,0.630540576424764,0.44292937929755,0.478364305972461,1.80249646187312,2.93564469172023,0.578596234326046,31.6661696272472,21.7562273527484,0.983528546038072,1.37968373152366,0,0.234423373184406,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0.321321316421807,1.13552068166615,0,0.162886959353576,1.64970122972535,1.32745138339963,0,0.302323556964751,0.188605079755898,0,0,0.258428293168221,1.09060118843252,0,0.316036757935816,1.05418608574999,1.03135543248187,0,0.18006109403131,0,0.214337035031592,0,0.178368817602071,0,0,0.938686832254841,0.42366414172764,0,1.31909002353184,0.484393280087717,0.120625849856312,0.596861720015682,0.492422699235184,0.582961673259701,0.18542530201051,2.9048049735635,1.23832120777933,1.66675074632741,2.0720530270516,3.00727300986255,2.74533807847827,7.47905091972963,8.81694149639045,6.77179871641677,0,0,0,0.324016022465404,0,0,0.134864346384821,0.330613822901344,0.523511883968059,0.518459893167171,0.621339313086926,0,0.149516546043979,0,0.194451188344048,0,0.168956125490778,0,0,0,0,0,1.58005560314089,2.02725215290164,2.67048488628551,1.42912905275575,2.8644271306797,1.19208812868759,1.20195449519969,0.590758108698309,1.31256384932592,1.21930890648,1.20991422164209,2.24153125701431,2.02044867444692,2.45441494581295,0.453460767230423,0,0,0,1.35232715822533,0.93841237725591,0.73260649706906,0.643105137237198,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0.341467211508268,0.243106717068294,0.419226325255965,0.183843508450014,0.222246727801615,0,0.320919209591815,0.252697211763798,0,0,0.0936415074698824,0.192075457214608,0.34461281373368,0,0.231768651889711,0,0,0.441596760403192,0,0.70990322463735,0.238436189947321,0.290692833264657,0.0941093804153306,0.423073039458382,0.182927972872773,0.263069711437843,0.135804113845862,0,0,0.29551344712669,0.409231043169689,0,0,0.249810577937946,0.233931608445408,1.28922632428979,0.191288332068843,0.661774257358546,0.231867835620421|short_description=p2@Cd48}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12506 | |||
|HGNC= | |||
|MCL_coexpression_id=515 | |||
|TSSclassifier=NA | |||
|UniProt=P18181 | |||
|association_with_transcript=22bp_to_NM_007649,uc007doz.1,uc007dpa.1_5end | |||
|cluster_id=chr1:173612208..173612223,+ | |||
|description=CAGE_peak_2_at_Cd48_5end | |||
|id=chr1:173612208..173612223,+ | |||
|ontology_enrichment_celltype=CL:0000988!8.41e-12!32;CL:0002032!8.41e-12!32;CL:0000037!8.41e-12!32;CL:0000566!8.41e-12!32;CL:0000837!8.41e-12!32;CL:0002031!3.92e-08!25;CL:0000838!5.55e-08!12;CL:0000542!1.35e-07!13;CL:0000051!1.35e-07!13;CL:0000084!2.32e-07!11;CL:0000827!2.32e-07!11;CL:0000738!4.84e-07!17;CL:0002087!4.84e-07!17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.54e-22,32;CL:0002032,2.54e-22,32;CL:0000037,2.54e-22,32;CL:0000837,2.54e-22,32;CL:0002031,4.00e-16,25;CL:0002320,4.03e-14,46;CL:0000134,4.03e-14,46;CL:0000838,7.09e-13,12;CL:0000738,5.61e-12,17;CL:0002087,5.61e-12,17;CL:0000049,8.11e-12,19;CL:0000084,8.73e-12,11;CL:0000827,8.73e-12,11;CL:0000542,1.31e-11,13;CL:0000051,1.31e-11,13;CL:0000219,9.66e-11,54;CL:0000791,1.31e-09,9;CL:0000789,1.31e-09,9;CL:0002420,1.31e-09,9;CL:0002419,1.31e-09,9;CL:0000790,1.31e-09,9;CL:0000624,1.49e-08,8;CL:0000763,1.86e-08,16;CL:0000553,1.06e-07,6;CL:0000556,1.06e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.60e-16!48;UBERON:0002405!1.28e-15!70;UBERON:0002390!7.42e-15!45;UBERON:0003061!7.42e-15!45;UBERON:0004177!1.14e-09!29;UBERON:0005057!6.08e-09!51;UBERON:0003081!1.07e-08!88;UBERON:0000926!3.02e-08!193;UBERON:0004120!3.02e-08!193;UBERON:0006603!3.02e-08!193;UBERON:0000077!6.14e-08!97;UBERON:0001041!1.88e-07!92;UBERON:0003408!3.73e-07!24;UBERON:0006562!4.29e-07!24;UBERON:0001557!4.29e-07!24;UBERON:0001042!4.29e-07!24;UBERON:0008814!4.29e-07!24;UBERON:0009145!4.29e-07!24;UBERON:0002370!5.38e-07!23;UBERON:0000974!5.38e-07!23;UBERON:0004807!5.38e-07!23;UBERON:0005058!5.38e-07!23;UBERON:0003351!5.38e-07!23;UBERON:0009113!5.38e-07!23;UBERON:0003295!5.38e-07!23;UBERON:0009722!5.38e-07!23;UBERON:0005562!5.38e-07!23;UBERON:0007690!5.38e-07!23;UBERON:0004119!9.63e-07!130;UBERON:0000925!9.63e-07!130;UBERON:0006595!9.63e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.05e-29,48;UBERON:0002405,3.05e-29,48;UBERON:0002390,2.95e-26,45;UBERON:0003061,2.95e-26,45;UBERON:0004177,1.50e-16,29;UBERON:0005057,1.50e-16,29;UBERON:0002384,4.03e-14,46;UBERON:0000077,1.15e-13,35;UBERON:0002370,8.49e-12,23;UBERON:0000974,8.49e-12,23;UBERON:0004807,8.49e-12,23;UBERON:0005058,8.49e-12,23;UBERON:0003351,8.49e-12,23;UBERON:0009113,8.49e-12,23;UBERON:0003295,8.49e-12,23;UBERON:0009722,8.49e-12,23;UBERON:0005562,8.49e-12,23;UBERON:0007690,8.49e-12,23;UBERON:0003081,2.23e-11,87;UBERON:0006562,4.35e-11,24;UBERON:0003408,4.35e-11,24;UBERON:0001557,4.35e-11,24;UBERON:0001042,4.35e-11,24;UBERON:0008814,4.35e-11,24;UBERON:0009145,4.35e-11,24;UBERON:0002371,3.71e-10,16;UBERON:0000926,2.42e-09,120;UBERON:0004120,2.42e-09,120;UBERON:0006603,2.42e-09,120;UBERON:0000072,2.75e-09,27;UBERON:0001474,7.48e-09,22;UBERON:0004765,7.48e-09,22;UBERON:0001434,7.48e-09,22;UBERON:0002204,6.62e-08,32;UBERON:0000065,6.14e-07,41 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0.233612640595526,11.3628524628587,1.97104211012333,3.04283884218592,1.36974374580404,1.11681022593471,4.10881751834894,3.75907730401689,1.99865857089398,3.03712901084739,3.49780939064073,7.88655413395594,8.36398044995006,5.51706547337439,0.17008658030214,5.95745707205312,5.22399578277871,1.43993180514066,2.75291137280604,0,0.430761996159075,0.215471232685889,0.190023419456374,1.00812051903972,0.665191531965914,0,0,0,0,0,0,2.51118978442145,9.37602413428561,6.28228492768558,0.588231488031014,0.683045484958446,1.94204141212461,0,0,0,0,0,0,0,0,0,5.36904339384756,3.62681071005672,4.7053131879945,0,0.286533439938757,0,0,0,0,0,0,3.1496490104849,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.68510327831436,10.0985774622397,1.1875371125186,0,0,0.230615497256059,0.150722640552623,0.23517741427141,0.125666591329675,0,0.433798070759735,3.5384422077995,0.970601099684455,1.54589062922275,0.969750506270444,0,0.292780797011547,0,1.27728527604296,16.6543023063229,15.5974710058286,16.1379188382792,0,0,0,0,0,0.20778804455956,0,0.203678727700633,2.23932547098167,0.758168275301024,0.420883711772948,0,0.229902104433473,0.180062129805349,0.30140963567143,0.0680364991513279,0.12811372028485,0,0,0,0,0,0,0.278047249225598,0.696504333044333,0,0.199034266818493,7.72434506044558,7.97778512055617,7.672414483681,0,0,0.36012412292203,0,0.196764231747404,0.154267112887378,0,0,0.116765342367169,0.16455984991348,0.164167464079095,0.243206428637567,0.438599962275997,1.75640092232841,0.805238512562231,0,0,0.991256348951394,0.264450566663544,0.213288250535234,0,0.128867461322093,0,0,0.190225626112559,1.42358718463353,0.164698954724011,0.502670417600539,0.397912944082302,0.779856348476481,0,0.432276099749388,0.398282546508734,0,0.228497025219458,1.1270773567308,0,0,0,0.0632365371242573,0.147610147979602,0,0.246794327843601,0.592905254174298,0.667380422864376,0.982794975566015,1.34917267430912,0.405720242777006,1.68824011826692,1.2731292589071,1.72617682470486,0.972811360650212,0.823684239564244,4.31304619582064,1.86070473834252,0.936113019343682,0.252578877947112,0.179397413521912,0,3.69506380333209,0.189491411770485,0.325929952884052,0,0.234690248288502,0.335012514883631,0.238043640886014,0.195133647857799,0.630540576424764,0.44292937929755,0.478364305972461,1.80249646187312,2.93564469172023,0.578596234326046,31.6661696272472,21.7562273527484,0.983528546038072,1.37968373152366,0,0.234423373184406,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0.321321316421807,1.13552068166615,0,0.162886959353576,1.64970122972535,1.32745138339963,0,0.302323556964751,0.188605079755898,0,0,0.258428293168221,1.09060118843252,0,0.316036757935816,1.05418608574999,1.03135543248187,0,0.18006109403131,0,0.214337035031592,0,0.178368817602071,0,0,0.938686832254841,0.42366414172764,0,1.31909002353184,0.484393280087717,0.120625849856312,0.596861720015682,0.492422699235184,0.582961673259701,0.18542530201051,2.9048049735635,1.23832120777933,1.66675074632741,2.0720530270516,3.00727300986255,2.74533807847827,7.47905091972963,8.81694149639045,6.77179871641677,0,0,0,0.324016022465404,0,0,0.134864346384821,0.330613822901344,0.523511883968059,0.518459893167171,0.621339313086926,0,0.149516546043979,0,0.194451188344048,0,0.168956125490778,0,0,0,0,0,1.58005560314089,2.02725215290164,2.67048488628551,1.42912905275575,2.8644271306797,1.19208812868759,1.20195449519969,0.590758108698309,1.31256384932592,1.21930890648,1.20991422164209,2.24153125701431,2.02044867444692,2.45441494581295,0.453460767230423,0,0,0,1.35232715822533,0.93841237725591,0.73260649706906,0.643105137237198,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0.341467211508268,0.243106717068294,0.419226325255965,0.183843508450014,0.222246727801615,0,0.320919209591815,0.252697211763798,0,0,0.0936415074698824,0.192075457214608,0.34461281373368,0,0.231768651889711,0,0,0.441596760403192,0,0.70990322463735,0.238436189947321,0.290692833264657,0.0941093804153306,0.423073039458382,0.182927972872773,0.263069711437843,0.135804113845862,0,0,0.29551344712669,0.409231043169689,0,0,0.249810577937946,0.233931608445408,1.28922632428979,0.191288332068843,0.661774257358546,0.231867835620421 | |||
|short_description=p2@Cd48 | |||
}} |
Latest revision as of 19:20, 26 September 2015
Short description: | p2@Cd48 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cd48_5end |
Coexpression cluster: | MCL_coexpression_mm9:515 |
Association with transcript: | 22bp_to_NM_007649, uc007doz.1, uc007dpa.1_5end |
EntrezGene: | Cd48 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.54e-22 | 32 |
hematopoietic oligopotent progenitor cell | 2.54e-22 | 32 |
hematopoietic stem cell | 2.54e-22 | 32 |
hematopoietic multipotent progenitor cell | 2.54e-22 | 32 |
hematopoietic lineage restricted progenitor cell | 4.00e-16 | 25 |
connective tissue cell | 4.03e-14 | 46 |
mesenchymal cell | 4.03e-14 | 46 |
lymphoid lineage restricted progenitor cell | 7.09e-13 | 12 |
leukocyte | 5.61e-12 | 17 |
nongranular leukocyte | 5.61e-12 | 17 |
common myeloid progenitor | 8.11e-12 | 19 |
T cell | 8.73e-12 | 11 |
pro-T cell | 8.73e-12 | 11 |
lymphocyte | 1.31e-11 | 13 |
common lymphoid progenitor | 1.31e-11 | 13 |
motile cell | 9.66e-11 | 54 |
mature alpha-beta T cell | 1.31e-09 | 9 |
alpha-beta T cell | 1.31e-09 | 9 |
immature T cell | 1.31e-09 | 9 |
mature T cell | 1.31e-09 | 9 |
immature alpha-beta T cell | 1.31e-09 | 9 |
CD4-positive, alpha-beta T cell | 1.49e-08 | 8 |
myeloid cell | 1.86e-08 | 16 |
megakaryocyte progenitor cell | 1.06e-07 | 6 |
megakaryocyte | 1.06e-07 | 6 |