FFCP PHASE1:Mm9::chr1:84692757..84692777,-: Difference between revisions
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{{FFCP|EntrezGene=227325|HGNC=|MCL_coexpression_id=401|UniProt=Q8JZM4|association_with_transcript=18bp_to_ENSMUST00000049126,NM_152915,uc007bsw.1,uc007bsx.1_5end|description=CAGE_peak_3_at_Dner_5end|id=chr1:84692757..84692777,-|ontology_enrichment_celltype=CL:0000117!2.35e-17!23;CL:0000337!2.35e-17!23;CL:0000221!1.75e-16!44;CL:0000133!1.75e-16!44;CL:0002319!2.91e-16!43;CL:0000540!3.17e-16!33;CL:0000047!3.17e-16!33;CL:0000031!3.17e-16!33;CL:0000404!3.17e-16!33;CL:0000055!5.44e-12!50;CL:0000393!7.60e-12!39;CL:0000211!7.60e-12!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.92e-19,23;CL:0000337,1.92e-19,23;CL:0000540,2.20e-11,33;CL:0000047,2.20e-11,33;CL:0000031,2.20e-11,33;CL:0000404,2.20e-11,33;CL:0002319,6.16e-10,43;CL:0000221,1.52e-09,44;CL:0000133,1.52e-09,44;CL:0000393,1.28e-08,39;CL:0000211,1.28e-08,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.42e-29!73;UBERON:0005743!1.42e-29!73;UBERON:0000073!5.49e-29!75;UBERON:0001016!5.49e-29!75;UBERON:0004121!4.17e-28!102;UBERON:0000924!4.17e-28!102;UBERON:0006601!4.17e-28!102;UBERON:0002346!1.37e-26!71;UBERON:0003075!1.37e-26!71;UBERON:0007284!1.37e-26!71;UBERON:0000033!2.06e-23!63;UBERON:0001049!2.30e-21!52;UBERON:0005068!2.30e-21!52;UBERON:0006241!2.30e-21!52;UBERON:0007135!2.30e-21!52;UBERON:0000955!1.43e-19!50;UBERON:0006238!1.43e-19!50;UBERON:0002616!8.95e-19!49;UBERON:0003056!6.51e-18!49;UBERON:0002020!5.95e-17!34;UBERON:0003080!1.77e-13!40;UBERON:0002780!8.44e-13!39;UBERON:0001890!8.44e-13!39;UBERON:0006240!8.44e-13!39;UBERON:0002791!9.61e-13!29;UBERON:0003528!9.61e-13!29;UBERON:0001893!9.61e-13!29;UBERON:0007811!1.03e-11!86;UBERON:0000153!1.25e-10!94;UBERON:0003076!4.19e-09!12;UBERON:0003057!4.19e-09!12;UBERON:0002420!1.28e-07!8;UBERON:0007245!1.28e-07!8;UBERON:0010009!1.28e-07!8;UBERON:0010011!1.28e-07!8;UBERON:0000454!1.28e-07!8;UBERON:0000956!3.80e-07!21;UBERON:0001869!3.80e-07!21;UBERON:0000203!3.80e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0002346,7.59e-28,64;UBERON:0003075,7.59e-28,64;UBERON:0007284,7.59e-28,64;UBERON:0000073,8.04e-28,54;UBERON:0001017,8.51e-27,73;UBERON:0001016,1.18e-25,75;UBERON:0001049,1.76e-25,52;UBERON:0005068,1.76e-25,52;UBERON:0006241,1.76e-25,52;UBERON:0007135,1.76e-25,52;UBERON:0004121,8.12e-25,95;UBERON:0000924,8.12e-25,95;UBERON:0006601,8.12e-25,95;UBERON:0010371,1.54e-22,73;UBERON:0000955,5.48e-20,47;UBERON:0006238,5.48e-20,47;UBERON:0002020,3.98e-19,34;UBERON:0002616,5.62e-19,46;UBERON:0003056,6.58e-19,49;UBERON:0010314,7.29e-15,92;UBERON:0003080,7.41e-15,40;UBERON:0002780,5.56e-14,39;UBERON:0001890,5.56e-14,39;UBERON:0006240,5.56e-14,39;UBERON:0003528,1.20e-13,29;UBERON:0002791,1.20e-13,29;UBERON:0001893,1.20e-13,29;UBERON:0003076,2.71e-12,12;UBERON:0003057,2.71e-12,12;UBERON:0002420,6.08e-10,8;UBERON:0007245,6.08e-10,8;UBERON:0010009,6.08e-10,8;UBERON:0010011,6.08e-10,8;UBERON:0000454,6.08e-10,8;UBERON:0002240,1.81e-08,6;UBERON:0005174,1.81e-08,6;UBERON:0001137,1.81e-08,6;UBERON:0002619,1.08e-07,17;UBERON:0001948,1.42e-07,5;UBERON:0002315,1.42e-07,5;UBERON:0000369,7.45e-07,5;UBERON:0002435,7.45e-07,5;UBERON:0000204,7.45e-07,5;UBERON:0010082,7.45e-07,5|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74420125104357,0.439372365468944,0,0.839918529752175,1.43752564364972,0,0,0,0,0,0,18.4107979382234,21.1596391708813,12.0427966666174,0.338844532069132,0,0,0,0,1.79760066311043,0.384218305321555,0.725827286159344,0.270011876663381,0.210324961351382,12.8542942981712,11.9269012113871,2.44981598429908,1.72521847832825,1.83843757322004,9.91042928994498,11.4918604276669,9.83081812839958,11.7378796079873,10.4295913706747,11.4600941522487,8.09630697104005,9.00420176050688,9.0150966188318,27.9897156199984,19.9320353118744,17.335148461753,0,0.226714680320357,0,0,0,0,0,0,0.140444420131752,0,0,0,0.422530259330042,0,0,0,0,0,0,0.45673551887624,0,0,0.520455980298408,0.304465478312141,0.461230994512117,0.301445281105245,0.117588707135705,0,0,0,0,0,0,0,0,26.9358333250623,23.6674778699204,0,0,0,0,7.63932260964596,5.94750783664214,7.03664371832041,1.56441888173049,1.79000820131231,8.10373373782284,6.81413304884582,0.101839363850316,0,0,0.841767423545896,0.130120442962704,1.37941262660084,1.44049703844279,1.65775299619287,2.24520447199382,3.84341160854549,3.93547243150861,3.62184719034622,0.215567992932842,0.378212160335639,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,1.05144974282064,1.74937841044784,0,0,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0.54390568381871,0,0,9.79358598925531,8.67366480782304,0,0,0.315508219416257,0.780877488593277,0.430846795465598,0,0.222798674082394,0,0.404810701674894,0.292255857911312,0.395287777946524,10.2822821254978,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,2.04263763452273,0,1.03486947026204,0.428674070063185,0,1.24858172321449,0,0,0,0,0,0,0,0,0,0,0,3.70850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0.337912250981556,0.58678619322877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38097570952153,0,2.06223818812425,2.74033007908257,2.2661816921691,2.02506750069542,3.60256962579376,1.35942722695261,2.07104124700728,0.415149390336707,1.19707462020309,1.02440163452481,1.70174701947806,0.628839487883947,1.65459157605013,1.55572709461131,1.03017528619447,1.28367683836726,1.51618327058278,1.01391719956096,1.69763707247469,1.03005658216871,1.6646539625266,1.7230640686684,0.952587382566147,1.15884325944855,1.35036454324594,1.64834360321323,1.61918812147837,0.342869252385415,0.354951612318675,1.90748951957857,0.872078499793971,1.41164070622996,1.52306294205018,1.46342378298218,2.36762740294059,0.814824683075171,1.12228454331548,1.06771516311757,1.28055827088233,1.22769312950907,1.70430525304563,1.35034627686799,4.74640098082097,1.40358965067245,1.28922632428979,1.91288332068843,0.882365676478062,0|short_description=p3@Dner}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=227325 | |||
|HGNC= | |||
|MCL_coexpression_id=401 | |||
|TSSclassifier=NA | |||
|UniProt=Q8JZM4 | |||
|association_with_transcript=18bp_to_ENSMUST00000049126,NM_152915,uc007bsw.1,uc007bsx.1_5end | |||
|cluster_id=chr1:84692757..84692777,- | |||
|description=CAGE_peak_3_at_Dner_5end | |||
|id=chr1:84692757..84692777,- | |||
|ontology_enrichment_celltype=CL:0000117!2.35e-17!23;CL:0000337!2.35e-17!23;CL:0000221!1.75e-16!44;CL:0000133!1.75e-16!44;CL:0002319!2.91e-16!43;CL:0000540!3.17e-16!33;CL:0000047!3.17e-16!33;CL:0000031!3.17e-16!33;CL:0000404!3.17e-16!33;CL:0000055!5.44e-12!50;CL:0000393!7.60e-12!39;CL:0000211!7.60e-12!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.92e-19,23;CL:0000337,1.92e-19,23;CL:0000540,2.20e-11,33;CL:0000047,2.20e-11,33;CL:0000031,2.20e-11,33;CL:0000404,2.20e-11,33;CL:0002319,6.16e-10,43;CL:0000221,1.52e-09,44;CL:0000133,1.52e-09,44;CL:0000393,1.28e-08,39;CL:0000211,1.28e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.42e-29!73;UBERON:0005743!1.42e-29!73;UBERON:0000073!5.49e-29!75;UBERON:0001016!5.49e-29!75;UBERON:0004121!4.17e-28!102;UBERON:0000924!4.17e-28!102;UBERON:0006601!4.17e-28!102;UBERON:0002346!1.37e-26!71;UBERON:0003075!1.37e-26!71;UBERON:0007284!1.37e-26!71;UBERON:0000033!2.06e-23!63;UBERON:0001049!2.30e-21!52;UBERON:0005068!2.30e-21!52;UBERON:0006241!2.30e-21!52;UBERON:0007135!2.30e-21!52;UBERON:0000955!1.43e-19!50;UBERON:0006238!1.43e-19!50;UBERON:0002616!8.95e-19!49;UBERON:0003056!6.51e-18!49;UBERON:0002020!5.95e-17!34;UBERON:0003080!1.77e-13!40;UBERON:0002780!8.44e-13!39;UBERON:0001890!8.44e-13!39;UBERON:0006240!8.44e-13!39;UBERON:0002791!9.61e-13!29;UBERON:0003528!9.61e-13!29;UBERON:0001893!9.61e-13!29;UBERON:0007811!1.03e-11!86;UBERON:0000153!1.25e-10!94;UBERON:0003076!4.19e-09!12;UBERON:0003057!4.19e-09!12;UBERON:0002420!1.28e-07!8;UBERON:0007245!1.28e-07!8;UBERON:0010009!1.28e-07!8;UBERON:0010011!1.28e-07!8;UBERON:0000454!1.28e-07!8;UBERON:0000956!3.80e-07!21;UBERON:0001869!3.80e-07!21;UBERON:0000203!3.80e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,7.59e-28,64;UBERON:0003075,7.59e-28,64;UBERON:0007284,7.59e-28,64;UBERON:0000073,8.04e-28,54;UBERON:0001017,8.51e-27,73;UBERON:0001016,1.18e-25,75;UBERON:0001049,1.76e-25,52;UBERON:0005068,1.76e-25,52;UBERON:0006241,1.76e-25,52;UBERON:0007135,1.76e-25,52;UBERON:0004121,8.12e-25,95;UBERON:0000924,8.12e-25,95;UBERON:0006601,8.12e-25,95;UBERON:0010371,1.54e-22,73;UBERON:0000955,5.48e-20,47;UBERON:0006238,5.48e-20,47;UBERON:0002020,3.98e-19,34;UBERON:0002616,5.62e-19,46;UBERON:0003056,6.58e-19,49;UBERON:0010314,7.29e-15,92;UBERON:0003080,7.41e-15,40;UBERON:0002780,5.56e-14,39;UBERON:0001890,5.56e-14,39;UBERON:0006240,5.56e-14,39;UBERON:0003528,1.20e-13,29;UBERON:0002791,1.20e-13,29;UBERON:0001893,1.20e-13,29;UBERON:0003076,2.71e-12,12;UBERON:0003057,2.71e-12,12;UBERON:0002420,6.08e-10,8;UBERON:0007245,6.08e-10,8;UBERON:0010009,6.08e-10,8;UBERON:0010011,6.08e-10,8;UBERON:0000454,6.08e-10,8;UBERON:0002240,1.81e-08,6;UBERON:0005174,1.81e-08,6;UBERON:0001137,1.81e-08,6;UBERON:0002619,1.08e-07,17;UBERON:0001948,1.42e-07,5;UBERON:0002315,1.42e-07,5;UBERON:0000369,7.45e-07,5;UBERON:0002435,7.45e-07,5;UBERON:0000204,7.45e-07,5;UBERON:0010082,7.45e-07,5 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74420125104357,0.439372365468944,0,0.839918529752175,1.43752564364972,0,0,0,0,0,0,18.4107979382234,21.1596391708813,12.0427966666174,0.338844532069132,0,0,0,0,1.79760066311043,0.384218305321555,0.725827286159344,0.270011876663381,0.210324961351382,12.8542942981712,11.9269012113871,2.44981598429908,1.72521847832825,1.83843757322004,9.91042928994498,11.4918604276669,9.83081812839958,11.7378796079873,10.4295913706747,11.4600941522487,8.09630697104005,9.00420176050688,9.0150966188318,27.9897156199984,19.9320353118744,17.335148461753,0,0.226714680320357,0,0,0,0,0,0,0.140444420131752,0,0,0,0.422530259330042,0,0,0,0,0,0,0.45673551887624,0,0,0.520455980298408,0.304465478312141,0.461230994512117,0.301445281105245,0.117588707135705,0,0,0,0,0,0,0,0,26.9358333250623,23.6674778699204,0,0,0,0,7.63932260964596,5.94750783664214,7.03664371832041,1.56441888173049,1.79000820131231,8.10373373782284,6.81413304884582,0.101839363850316,0,0,0.841767423545896,0.130120442962704,1.37941262660084,1.44049703844279,1.65775299619287,2.24520447199382,3.84341160854549,3.93547243150861,3.62184719034622,0.215567992932842,0.378212160335639,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,1.05144974282064,1.74937841044784,0,0,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0.54390568381871,0,0,9.79358598925531,8.67366480782304,0,0,0.315508219416257,0.780877488593277,0.430846795465598,0,0.222798674082394,0,0.404810701674894,0.292255857911312,0.395287777946524,10.2822821254978,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,2.04263763452273,0,1.03486947026204,0.428674070063185,0,1.24858172321449,0,0,0,0,0,0,0,0,0,0,0,3.70850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0.337912250981556,0.58678619322877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38097570952153,0,2.06223818812425,2.74033007908257,2.2661816921691,2.02506750069542,3.60256962579376,1.35942722695261,2.07104124700728,0.415149390336707,1.19707462020309,1.02440163452481,1.70174701947806,0.628839487883947,1.65459157605013,1.55572709461131,1.03017528619447,1.28367683836726,1.51618327058278,1.01391719956096,1.69763707247469,1.03005658216871,1.6646539625266,1.7230640686684,0.952587382566147,1.15884325944855,1.35036454324594,1.64834360321323,1.61918812147837,0.342869252385415,0.354951612318675,1.90748951957857,0.872078499793971,1.41164070622996,1.52306294205018,1.46342378298218,2.36762740294059,0.814824683075171,1.12228454331548,1.06771516311757,1.28055827088233,1.22769312950907,1.70430525304563,1.35034627686799,4.74640098082097,1.40358965067245,1.28922632428979,1.91288332068843,0.882365676478062,0 | |||
|short_description=p3@Dner | |||
}} |
Latest revision as of 16:52, 1 October 2015
Short description: | p3@Dner |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Dner_5end |
Coexpression cluster: | MCL_coexpression_mm9:401 |
Association with transcript: | 18bp_to_ENSMUST00000049126, NM_152915, uc007bsw.1, uc007bsx.1_5end |
EntrezGene: | Dner |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.92e-19 | 23 |
neuroblast (sensu Vertebrata) | 1.92e-19 | 23 |
neuron | 2.20e-11 | 33 |
neuronal stem cell | 2.20e-11 | 33 |
neuroblast | 2.20e-11 | 33 |
electrically signaling cell | 2.20e-11 | 33 |
neural cell | 6.16e-10 | 43 |
ectodermal cell | 1.52e-09 | 44 |
neurectodermal cell | 1.52e-09 | 44 |
electrically responsive cell | 1.28e-08 | 39 |
electrically active cell | 1.28e-08 | 39 |