FFCP PHASE1:Mm9::chr2:168567350..168567370,-: Difference between revisions
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{{FFCP|EntrezGene=11981|HGNC=|MCL_coexpression_id=1296|UniProt=O70228,A2AQC3|association_with_transcript=-50bp_to_ENSMUST00000029060,ENSMUST00000140188,NM_015731,uc008obc.1,uc008obe.1_5end|description=CAGE_peak_9_at_Atp9a_5end|id=chr2:168567350..168567370,-|ontology_enrichment_celltype=CL:0000117!1.07e-14!23;CL:0000337!1.07e-14!23;CL:0000540!4.49e-14!33;CL:0000047!4.49e-14!33;CL:0000031!4.49e-14!33;CL:0000404!4.49e-14!33;CL:0000221!1.39e-13!44;CL:0000133!1.39e-13!44;CL:0002319!1.89e-13!43;CL:0000393!2.83e-10!39;CL:0000211!2.83e-10!39;CL:0000055!9.53e-10!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.77e-24,23;CL:0000337,1.77e-24,23;CL:0000540,1.90e-18,33;CL:0000047,1.90e-18,33;CL:0000031,1.90e-18,33;CL:0000404,1.90e-18,33;CL:0000393,1.37e-14,39;CL:0000211,1.37e-14,39;CL:0002319,7.61e-14,43;CL:0000221,2.23e-13,44;CL:0000133,2.23e-13,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!5.23e-29!73;UBERON:0005743!5.23e-29!73;UBERON:0000073!1.47e-28!75;UBERON:0001016!1.47e-28!75;UBERON:0004121!1.97e-27!102;UBERON:0000924!1.97e-27!102;UBERON:0006601!1.97e-27!102;UBERON:0002346!9.57e-25!71;UBERON:0003075!9.57e-25!71;UBERON:0007284!9.57e-25!71;UBERON:0001049!3.98e-24!52;UBERON:0005068!3.98e-24!52;UBERON:0006241!3.98e-24!52;UBERON:0007135!3.98e-24!52;UBERON:0000955!4.22e-22!50;UBERON:0006238!4.22e-22!50;UBERON:0002616!1.09e-21!49;UBERON:0000033!1.95e-21!63;UBERON:0002020!1.43e-19!34;UBERON:0003056!1.23e-17!49;UBERON:0003080!1.44e-17!40;UBERON:0002780!6.06e-17!39;UBERON:0001890!6.06e-17!39;UBERON:0006240!6.06e-17!39;UBERON:0002791!9.93e-16!29;UBERON:0003528!9.93e-16!29;UBERON:0001893!9.93e-16!29;UBERON:0007811!1.92e-11!86;UBERON:0000956!9.98e-11!21;UBERON:0001869!9.98e-11!21;UBERON:0000203!9.98e-11!21;UBERON:0000153!1.06e-10!94;UBERON:0002619!2.58e-09!17;UBERON:0002021!1.65e-07!10;UBERON:0000411!1.65e-07!10;UBERON:0001950!1.65e-07!10;UBERON:0003076!3.50e-07!12;UBERON:0003057!3.50e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.30e-36,54;UBERON:0001017,3.06e-35,73;UBERON:0001016,5.87e-34,75;UBERON:0002020,3.51e-33,34;UBERON:0001049,7.12e-33,52;UBERON:0005068,7.12e-33,52;UBERON:0006241,7.12e-33,52;UBERON:0007135,7.12e-33,52;UBERON:0002346,7.35e-31,64;UBERON:0003075,7.35e-31,64;UBERON:0007284,7.35e-31,64;UBERON:0004121,6.21e-28,95;UBERON:0000924,6.21e-28,95;UBERON:0006601,6.21e-28,95;UBERON:0010371,1.29e-25,73;UBERON:0003528,3.33e-25,29;UBERON:0002791,3.33e-25,29;UBERON:0001893,3.33e-25,29;UBERON:0002616,2.42e-24,46;UBERON:0000955,1.25e-23,47;UBERON:0006238,1.25e-23,47;UBERON:0003080,2.60e-23,40;UBERON:0002780,4.15e-22,39;UBERON:0001890,4.15e-22,39;UBERON:0006240,4.15e-22,39;UBERON:0003056,9.42e-22,49;UBERON:0010314,6.01e-18,92;UBERON:0000956,6.16e-15,21;UBERON:0001869,6.16e-15,21;UBERON:0000203,6.16e-15,21;UBERON:0002619,8.25e-15,17;UBERON:0002021,1.62e-14,10;UBERON:0000411,1.62e-14,10;UBERON:0001950,1.62e-14,10;UBERON:0002420,5.65e-12,8;UBERON:0007245,5.65e-12,8;UBERON:0010009,5.65e-12,8;UBERON:0010011,5.65e-12,8;UBERON:0000454,5.65e-12,8;UBERON:0002240,1.34e-10,6;UBERON:0005174,1.34e-10,6;UBERON:0001137,1.34e-10,6;UBERON:0003076,7.85e-10,12;UBERON:0003057,7.85e-10,12;UBERON:0001948,1.69e-09,5;UBERON:0002315,1.69e-09,5;UBERON:0000025,2.59e-09,114;UBERON:0004111,4.52e-08,122;UBERON:0000369,1.00e-07,5;UBERON:0002435,1.00e-07,5;UBERON:0000204,1.00e-07,5;UBERON:0010082,1.00e-07,5;UBERON:0002950,4.50e-07,4;UBERON:0001891,4.50e-07,4;UBERON:0009616,4.50e-07,4;UBERON:0010286,4.50e-07,4|phase1_expression=0.320297694209588,0.348975407639361,0,0.30246421130683,0,0,0.233612640595526,0.129123323441576,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,2.63634199468316,0,0,0.159992422793407,0.22940928106717,0,0,0,0,0.504060259519861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.218025156380447,0.439372365468944,0.194429899074283,0.279972843250725,0,0,0,0,0,0.573066879877513,0,6.47412674750713,4.23192783417626,3.1691570175309,0,1.77858959222228,0,0,0,1.19840044207362,0.768436610643109,0.622137673850866,0.675029691658453,1.05162480675691,15.4251531578054,13.693849539,0.734944795289724,1.53352753629178,2.75765635983006,9.91042928994498,4.59674417106676,3.5329502648936,5.01167893374737,4.02545631850602,7.29278718779464,5.58365998002762,6.19038871034848,4.27835093775068,14.4368006882097,10.2507610175354,8.20157561631323,0.151452386666368,0.226714680320357,0,0,0,0,0,0,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0,0,0,0.34255163915718,0,0.29688427812965,0.346970653532272,0.304465478312141,0.691846491768175,0.150722640552623,0.117588707135705,0.376999773989026,0.247194967734374,0.144599356919912,0,0,0,0.484875253135222,0,0.585561594023094,1.46612694769419,0,0,0,0,4.04434726393021,1.37250180845588,3.14135880282161,4.86708096538374,2.81287003063364,3.32460871295296,4.05603157669394,0.509196819251581,0,0.505445516867349,0.420883711772948,0.130120442962704,0,0.360124259610698,0.30140963567143,1.15662048557257,1.15302348256365,1.40552586839593,0.258703370739016,0,0.378212160335639,0.527853372491847,0,0.278047249225598,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0,0,0.36012412292203,0.710234206755631,0,0.154267112887378,0,0.536546802799238,0,0,0,0.162137619091711,0,0,0.134206418760372,3.57492912559016,2.26390147234426,0.330418782983798,0.264450566663544,0.213288250535234,0.232236671860439,0.128867461322093,0,0.444756087689741,0.190225626112559,0.474529061544512,0,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0,0.114248512609729,0,0.203651327845314,0,0.280543279561274,0.126473074248515,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0,0.37898282354097,0,0.169745085775188,0.234690248288502,0,0,0,0,0,0.159454768657487,0.163863314715738,0,0,0,0,0.983528546038072,0,4.33486592967038,2.46144541843627,0,0,0.315508219416257,0.390438744296638,1.72338718186239,0.238968797952552,0.222798674082394,0.283076530788832,0,1.46127928955656,0.790575555893047,0.963963949265421,0.141940085208269,0.178065603667255,0.81443479676788,0,0,0,0,0.188605079755898,0.590603785761546,0,0.775284879504663,0.363533729477506,0,0,0,0,0,0.36012218806262,0.646793418913773,0.214337035031592,0.354680467284547,0.891844088010353,0.822745103010605,1.2178597964584,0.23467170806371,0,0.441056796109924,0,0.322928853391811,0.301564624640779,0.119372344003136,0.164140899745061,0,3.15223013417866,0,0,0.185194527369712,0,0,0,0.169978429993855,0,0,0.954670618015114,0.316335993581135,0,0,0,0.218362563746178,0.269728692769641,0.165306911450672,0,0.129614973291793,0,15.7834022831573,0.149516546043979,0,0.388902376688095,0.774958940866387,0.168956125490778,0.234714477291508,0.13020438484395,0.524296722128554,2.65742532908607,3.45636007509439,0,0.405450430580328,0.102710957164827,0.129920822977795,0,0,0.120195449519969,0.147689527174577,0,0.0762068066549998,0,0.194915761479505,0.0962118416403295,0,0.226730383615211,0,0,0,0.386379188064381,0,0,0.428736758158132,0,6.7770221114048,4.14292712856459,5.72895513439397,4.29632955859219,4.7955776383945,3.7769694869485,4.05013500139084,4.05289082901798,2.71885445390523,3.10656187051092,0,0,0.512200817262403,0.243106717068294,0.838452650511929,1.10306105070008,0.44449345560323,1.03017528619447,0.64183841918363,0.505394423527595,0.50695859978048,0.943131706930381,0.749132059759059,1.02440243847791,0.976402972245426,0.476293691283074,0.811190281613988,1.15745532278223,1.23625770240992,0.735994600671987,0.685738504770831,0.354951612318675,1.1921809497366,0.290692833264657,0.282328141245992,0.507687647350059,0.365855945745545,1.31534855718921,0.543216455383447,1.68342681497322,0.830445126869219,0.886540341380071,0,0.929621047115796,0.578719832943424,1.49886346762768,0.233931608445408,0,0.956441660344217,0,0.695603506861264|short_description=p9@Atp9a}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=11981 | |||
|HGNC= | |||
|MCL_coexpression_id=1296 | |||
|TSSclassifier=NA | |||
|UniProt=O70228,A2AQC3 | |||
|association_with_transcript=-50bp_to_ENSMUST00000029060,ENSMUST00000140188,NM_015731,uc008obc.1,uc008obe.1_5end | |||
|cluster_id=chr2:168567350..168567370,- | |||
|description=CAGE_peak_9_at_Atp9a_5end | |||
|id=chr2:168567350..168567370,- | |||
|ontology_enrichment_celltype=CL:0000117!1.07e-14!23;CL:0000337!1.07e-14!23;CL:0000540!4.49e-14!33;CL:0000047!4.49e-14!33;CL:0000031!4.49e-14!33;CL:0000404!4.49e-14!33;CL:0000221!1.39e-13!44;CL:0000133!1.39e-13!44;CL:0002319!1.89e-13!43;CL:0000393!2.83e-10!39;CL:0000211!2.83e-10!39;CL:0000055!9.53e-10!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.77e-24,23;CL:0000337,1.77e-24,23;CL:0000540,1.90e-18,33;CL:0000047,1.90e-18,33;CL:0000031,1.90e-18,33;CL:0000404,1.90e-18,33;CL:0000393,1.37e-14,39;CL:0000211,1.37e-14,39;CL:0002319,7.61e-14,43;CL:0000221,2.23e-13,44;CL:0000133,2.23e-13,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.23e-29!73;UBERON:0005743!5.23e-29!73;UBERON:0000073!1.47e-28!75;UBERON:0001016!1.47e-28!75;UBERON:0004121!1.97e-27!102;UBERON:0000924!1.97e-27!102;UBERON:0006601!1.97e-27!102;UBERON:0002346!9.57e-25!71;UBERON:0003075!9.57e-25!71;UBERON:0007284!9.57e-25!71;UBERON:0001049!3.98e-24!52;UBERON:0005068!3.98e-24!52;UBERON:0006241!3.98e-24!52;UBERON:0007135!3.98e-24!52;UBERON:0000955!4.22e-22!50;UBERON:0006238!4.22e-22!50;UBERON:0002616!1.09e-21!49;UBERON:0000033!1.95e-21!63;UBERON:0002020!1.43e-19!34;UBERON:0003056!1.23e-17!49;UBERON:0003080!1.44e-17!40;UBERON:0002780!6.06e-17!39;UBERON:0001890!6.06e-17!39;UBERON:0006240!6.06e-17!39;UBERON:0002791!9.93e-16!29;UBERON:0003528!9.93e-16!29;UBERON:0001893!9.93e-16!29;UBERON:0007811!1.92e-11!86;UBERON:0000956!9.98e-11!21;UBERON:0001869!9.98e-11!21;UBERON:0000203!9.98e-11!21;UBERON:0000153!1.06e-10!94;UBERON:0002619!2.58e-09!17;UBERON:0002021!1.65e-07!10;UBERON:0000411!1.65e-07!10;UBERON:0001950!1.65e-07!10;UBERON:0003076!3.50e-07!12;UBERON:0003057!3.50e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.30e-36,54;UBERON:0001017,3.06e-35,73;UBERON:0001016,5.87e-34,75;UBERON:0002020,3.51e-33,34;UBERON:0001049,7.12e-33,52;UBERON:0005068,7.12e-33,52;UBERON:0006241,7.12e-33,52;UBERON:0007135,7.12e-33,52;UBERON:0002346,7.35e-31,64;UBERON:0003075,7.35e-31,64;UBERON:0007284,7.35e-31,64;UBERON:0004121,6.21e-28,95;UBERON:0000924,6.21e-28,95;UBERON:0006601,6.21e-28,95;UBERON:0010371,1.29e-25,73;UBERON:0003528,3.33e-25,29;UBERON:0002791,3.33e-25,29;UBERON:0001893,3.33e-25,29;UBERON:0002616,2.42e-24,46;UBERON:0000955,1.25e-23,47;UBERON:0006238,1.25e-23,47;UBERON:0003080,2.60e-23,40;UBERON:0002780,4.15e-22,39;UBERON:0001890,4.15e-22,39;UBERON:0006240,4.15e-22,39;UBERON:0003056,9.42e-22,49;UBERON:0010314,6.01e-18,92;UBERON:0000956,6.16e-15,21;UBERON:0001869,6.16e-15,21;UBERON:0000203,6.16e-15,21;UBERON:0002619,8.25e-15,17;UBERON:0002021,1.62e-14,10;UBERON:0000411,1.62e-14,10;UBERON:0001950,1.62e-14,10;UBERON:0002420,5.65e-12,8;UBERON:0007245,5.65e-12,8;UBERON:0010009,5.65e-12,8;UBERON:0010011,5.65e-12,8;UBERON:0000454,5.65e-12,8;UBERON:0002240,1.34e-10,6;UBERON:0005174,1.34e-10,6;UBERON:0001137,1.34e-10,6;UBERON:0003076,7.85e-10,12;UBERON:0003057,7.85e-10,12;UBERON:0001948,1.69e-09,5;UBERON:0002315,1.69e-09,5;UBERON:0000025,2.59e-09,114;UBERON:0004111,4.52e-08,122;UBERON:0000369,1.00e-07,5;UBERON:0002435,1.00e-07,5;UBERON:0000204,1.00e-07,5;UBERON:0010082,1.00e-07,5;UBERON:0002950,4.50e-07,4;UBERON:0001891,4.50e-07,4;UBERON:0009616,4.50e-07,4;UBERON:0010286,4.50e-07,4 | |||
|phase1_expression=0.320297694209588,0.348975407639361,0,0.30246421130683,0,0,0.233612640595526,0.129123323441576,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,2.63634199468316,0,0,0.159992422793407,0.22940928106717,0,0,0,0,0.504060259519861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.218025156380447,0.439372365468944,0.194429899074283,0.279972843250725,0,0,0,0,0,0.573066879877513,0,6.47412674750713,4.23192783417626,3.1691570175309,0,1.77858959222228,0,0,0,1.19840044207362,0.768436610643109,0.622137673850866,0.675029691658453,1.05162480675691,15.4251531578054,13.693849539,0.734944795289724,1.53352753629178,2.75765635983006,9.91042928994498,4.59674417106676,3.5329502648936,5.01167893374737,4.02545631850602,7.29278718779464,5.58365998002762,6.19038871034848,4.27835093775068,14.4368006882097,10.2507610175354,8.20157561631323,0.151452386666368,0.226714680320357,0,0,0,0,0,0,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0,0,0,0.34255163915718,0,0.29688427812965,0.346970653532272,0.304465478312141,0.691846491768175,0.150722640552623,0.117588707135705,0.376999773989026,0.247194967734374,0.144599356919912,0,0,0,0.484875253135222,0,0.585561594023094,1.46612694769419,0,0,0,0,4.04434726393021,1.37250180845588,3.14135880282161,4.86708096538374,2.81287003063364,3.32460871295296,4.05603157669394,0.509196819251581,0,0.505445516867349,0.420883711772948,0.130120442962704,0,0.360124259610698,0.30140963567143,1.15662048557257,1.15302348256365,1.40552586839593,0.258703370739016,0,0.378212160335639,0.527853372491847,0,0.278047249225598,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0,0,0.36012412292203,0.710234206755631,0,0.154267112887378,0,0.536546802799238,0,0,0,0.162137619091711,0,0,0.134206418760372,3.57492912559016,2.26390147234426,0.330418782983798,0.264450566663544,0.213288250535234,0.232236671860439,0.128867461322093,0,0.444756087689741,0.190225626112559,0.474529061544512,0,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0,0.114248512609729,0,0.203651327845314,0,0.280543279561274,0.126473074248515,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0,0.37898282354097,0,0.169745085775188,0.234690248288502,0,0,0,0,0,0.159454768657487,0.163863314715738,0,0,0,0,0.983528546038072,0,4.33486592967038,2.46144541843627,0,0,0.315508219416257,0.390438744296638,1.72338718186239,0.238968797952552,0.222798674082394,0.283076530788832,0,1.46127928955656,0.790575555893047,0.963963949265421,0.141940085208269,0.178065603667255,0.81443479676788,0,0,0,0,0.188605079755898,0.590603785761546,0,0.775284879504663,0.363533729477506,0,0,0,0,0,0.36012218806262,0.646793418913773,0.214337035031592,0.354680467284547,0.891844088010353,0.822745103010605,1.2178597964584,0.23467170806371,0,0.441056796109924,0,0.322928853391811,0.301564624640779,0.119372344003136,0.164140899745061,0,3.15223013417866,0,0,0.185194527369712,0,0,0,0.169978429993855,0,0,0.954670618015114,0.316335993581135,0,0,0,0.218362563746178,0.269728692769641,0.165306911450672,0,0.129614973291793,0,15.7834022831573,0.149516546043979,0,0.388902376688095,0.774958940866387,0.168956125490778,0.234714477291508,0.13020438484395,0.524296722128554,2.65742532908607,3.45636007509439,0,0.405450430580328,0.102710957164827,0.129920822977795,0,0,0.120195449519969,0.147689527174577,0,0.0762068066549998,0,0.194915761479505,0.0962118416403295,0,0.226730383615211,0,0,0,0.386379188064381,0,0,0.428736758158132,0,6.7770221114048,4.14292712856459,5.72895513439397,4.29632955859219,4.7955776383945,3.7769694869485,4.05013500139084,4.05289082901798,2.71885445390523,3.10656187051092,0,0,0.512200817262403,0.243106717068294,0.838452650511929,1.10306105070008,0.44449345560323,1.03017528619447,0.64183841918363,0.505394423527595,0.50695859978048,0.943131706930381,0.749132059759059,1.02440243847791,0.976402972245426,0.476293691283074,0.811190281613988,1.15745532278223,1.23625770240992,0.735994600671987,0.685738504770831,0.354951612318675,1.1921809497366,0.290692833264657,0.282328141245992,0.507687647350059,0.365855945745545,1.31534855718921,0.543216455383447,1.68342681497322,0.830445126869219,0.886540341380071,0,0.929621047115796,0.578719832943424,1.49886346762768,0.233931608445408,0,0.956441660344217,0,0.695603506861264 | |||
|short_description=p9@Atp9a | |||
}} |
Latest revision as of 05:29, 26 September 2015
Short description: | p9@Atp9a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Atp9a_5end |
Coexpression cluster: | MCL_coexpression_mm9:1296 |
Association with transcript: | -50bp_to_ENSMUST00000029060, ENSMUST00000140188, NM_015731, uc008obc.1, uc008obe.1_5end |
EntrezGene: | Atp9a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.77e-24 | 23 |
neuroblast (sensu Vertebrata) | 1.77e-24 | 23 |
neuron | 1.90e-18 | 33 |
neuronal stem cell | 1.90e-18 | 33 |
neuroblast | 1.90e-18 | 33 |
electrically signaling cell | 1.90e-18 | 33 |
electrically responsive cell | 1.37e-14 | 39 |
electrically active cell | 1.37e-14 | 39 |
neural cell | 7.61e-14 | 43 |
ectodermal cell | 2.23e-13 | 44 |
neurectodermal cell | 2.23e-13 | 44 |