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FFCP PHASE1:Mm9::chr10:20679401..20679449,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr10:20679401..20679449,+
|DHSsupport=NA
|short_description=p3@Ahi1
|DPIdataset=NA
|description=CAGE_peak_3_at_Ahi1_5end
|association_with_transcript=0bp_to_uc007eoe.1_5end
|EntrezGene=52906
|EntrezGene=52906
|HGNC=
|HGNC=
|MCL_coexpression_id=145
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_uc007eoe.1_5end
|cluster_id=chr10:20679401..20679449,+
|description=CAGE_peak_3_at_Ahi1_5end
|id=chr10:20679401..20679449,+
|ontology_enrichment_celltype=CL:0000117!1.47e-11!23;CL:0000337!1.47e-11!23;CL:0000540!2.71e-10!33;CL:0000047!2.71e-10!33;CL:0000031!2.71e-10!33;CL:0000404!2.71e-10!33;CL:0000393!6.05e-09!39;CL:0000211!6.05e-09!39
|ontology_enrichment_celltype_v019_2=CL:0000117,7.82e-20,23;CL:0000337,7.82e-20,23;CL:0000540,9.01e-17,33;CL:0000047,9.01e-17,33;CL:0000031,9.01e-17,33;CL:0000404,9.01e-17,33;CL:0000393,2.73e-13,39;CL:0000211,2.73e-13,39;CL:0002319,1.60e-11,43;CL:0000221,3.91e-11,44;CL:0000133,3.91e-11,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!3.49e-24!71;UBERON:0003075!3.49e-24!71;UBERON:0007284!3.49e-24!71;UBERON:0001017!2.36e-21!73;UBERON:0005743!2.36e-21!73;UBERON:0000073!8.10e-21!75;UBERON:0001016!8.10e-21!75;UBERON:0001049!1.06e-20!52;UBERON:0005068!1.06e-20!52;UBERON:0006241!1.06e-20!52;UBERON:0007135!1.06e-20!52;UBERON:0000033!4.22e-20!63;UBERON:0000955!2.32e-19!50;UBERON:0006238!2.32e-19!50;UBERON:0003056!2.69e-19!49;UBERON:0002616!6.16e-19!49;UBERON:0004121!7.18e-19!102;UBERON:0000924!7.18e-19!102;UBERON:0006601!7.18e-19!102;UBERON:0003080!8.73e-17!40;UBERON:0002020!2.44e-16!34;UBERON:0002780!3.58e-16!39;UBERON:0001890!3.58e-16!39;UBERON:0006240!3.58e-16!39;UBERON:0007811!4.81e-16!86;UBERON:0002791!3.95e-13!29;UBERON:0003528!3.95e-13!29;UBERON:0001893!3.95e-13!29;UBERON:0000153!4.79e-13!94;UBERON:0000956!6.42e-10!21;UBERON:0001869!6.42e-10!21;UBERON:0000203!6.42e-10!21;UBERON:0002021!2.59e-08!10;UBERON:0000411!2.59e-08!10;UBERON:0001950!2.59e-08!10;UBERON:0002619!4.51e-08!17;UBERON:0000025!6.20e-07!114
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.52e-40,54;UBERON:0001017,2.61e-37,73;UBERON:0001049,1.08e-36,52;UBERON:0005068,1.08e-36,52;UBERON:0006241,1.08e-36,52;UBERON:0007135,1.08e-36,52;UBERON:0001016,5.38e-36,75;UBERON:0002346,2.50e-33,64;UBERON:0003075,2.50e-33,64;UBERON:0007284,2.50e-33,64;UBERON:0002020,6.62e-31,34;UBERON:0004121,5.83e-29,95;UBERON:0000924,5.83e-29,95;UBERON:0006601,5.83e-29,95;UBERON:0002616,2.67e-28,46;UBERON:0010371,7.44e-28,73;UBERON:0003080,1.08e-27,40;UBERON:0000955,1.67e-27,47;UBERON:0006238,1.67e-27,47;UBERON:0002780,2.26e-26,39;UBERON:0001890,2.26e-26,39;UBERON:0006240,2.26e-26,39;UBERON:0003056,1.15e-24,49;UBERON:0003528,1.04e-23,29;UBERON:0002791,1.04e-23,29;UBERON:0001893,1.04e-23,29;UBERON:0010314,5.26e-21,92;UBERON:0002021,3.34e-17,10;UBERON:0000411,3.34e-17,10;UBERON:0001950,3.34e-17,10;UBERON:0000956,1.77e-15,21;UBERON:0001869,1.77e-15,21;UBERON:0000203,1.77e-15,21;UBERON:0002619,4.81e-13,17;UBERON:0000025,4.93e-12,114;UBERON:0004111,1.38e-10,122;UBERON:0002240,7.61e-10,6;UBERON:0005174,7.61e-10,6;UBERON:0001137,7.61e-10,6;UBERON:0002420,1.65e-09,8;UBERON:0007245,1.65e-09,8;UBERON:0010009,1.65e-09,8;UBERON:0010011,1.65e-09,8;UBERON:0000454,1.65e-09,8;UBERON:0003076,4.57e-09,12;UBERON:0003057,4.57e-09,12;UBERON:0001948,1.18e-08,5;UBERON:0002315,1.18e-08,5;UBERON:0011216,5.31e-08,194;UBERON:0002950,1.67e-07,4;UBERON:0001891,1.67e-07,4;UBERON:0009616,1.67e-07,4;UBERON:0010286,1.67e-07,4
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0,0.34243593645101,0.239316476986009,0,0.34968160967599,0,0,0,0,0.137114433605739,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304130793658544,0.183546752161682,0,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0.257259436035947,0.573066879877513,0,0.606949382578793,4.23192783417626,1.90149421051854,0,0,0,0,0,0,0,1.8664130215526,1.62007125998029,0.841299845405528,1.99955689082663,3.75476519617743,0.734944795289724,0.191690942036473,1.83843757322004,3.30347642998166,11.4918604276669,16.2822925251618,1.31886287730194,2.47016637726506,0,5.02529398202486,4.50210088025344,10.3902808488231,17.6777151284201,11.8168495063255,1.3047961207771,0.075726193333184,0.151143120213571,0,0,0,0.539703191637817,0,0,0.140444420131752,0.852151612890289,0,0.35333957451034,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.520455980298408,0.913396434936424,0.461230994512117,1.20578112442098,0.940709657085638,0.125666591329675,0,0,0,0.161766849947409,0,0,0,1.46390398505774,1.04723353406728,0.255457055208591,0,0,0.127070227073065,2.54644086988199,1.37250180845588,4.27224797183739,1.39059456153821,2.30143911597297,1.24672826735736,1.94689515681309,0.203678727700633,0,0,1.26265113531884,0.260240885925407,0.229902104433473,0.720248519221397,0.60281927134286,0.884474488967262,0.768682321709099,0.937017245597288,4.9153640440413,0.215567992932842,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0.703578179943289,0,0,0.196764231747404,0.154267112887378,0,0.268273401399619,0.116765342367169,0.987359099480883,0.164167464079095,0.0810688095458557,0,0,0,0.841159794256509,4.83651678182637,0,0,0.426576501070468,0.696710015581316,0.128867461322093,0,0,0.190225626112559,0,0.494096864172033,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0,0,0.342745537829186,0,0.814605311381257,0.969762435838129,0.631222379012867,0.316182685621286,0.738050739898011,0.156998727841375,0.123397163921801,0,0.166845105716094,0,0.449724224769707,0.202860121388503,0,0,0,0.648540907100142,0,1.43768206527355,0,0.312037673114561,0,0,0,0,0,0.651859905768103,0.678980343100753,0.234690248288502,0,0,0.585400943573396,0,0.664394068946325,0.318909537314974,0.491589944147214,0.172684981865896,0,0,0,0,0,0.963303539926752,1.05490517932983,0.163934945376675,0,0.315508219416257,0,1.29254038639679,0,0.668396022247182,0.566153061577665,1.21443210502468,1.16902343164525,0,0.963963949265421,0,0,0.651547837414304,0.659880491890142,0,0.242780636154981,0,0.377210159511796,0,0,0.516856586336442,0,0.356497378384721,0,0,0,1.02131881726136,0.540183282093931,0.129358683782755,0.428674070063185,0.886701168211368,1.24858172321449,1.31639216481697,1.2178597964584,0.23467170806371,0,0,0,0,0,0,0,0.291480836629851,1.8542530201051,0.512612642393558,0,0,0.941842285023455,2.46049609897845,0.228778173206523,0.169978429993855,0,0,0,0.158167996790568,0,0.648032044930808,0.836353184057875,0.87345025498471,0.269728692769641,0.0826534557253359,0,0,0,2.81846469342095,0.448549638131936,0,0.194451188344048,0,0.675824501963113,1.29092962510329,0.781226309063701,0.419437377702843,8.45544422891021,4.32045009386798,0,0,0.102710957164827,0.129920822977795,0.179026695667481,0.596044064343795,0.480781798079875,0.295379054349154,0.100966449948148,0.990688486514998,0.302478555410522,0.779663045918019,0.384847366561318,0.350630706544707,0,0,0,0.167884616364078,0.579568782096571,0,0,0,0,16.3778034358949,11.5081309126794,9.73922372846974,6.8741272937475,3.42541259885321,9.82012066606611,4.05013500139084,8.10578165803597,5.43770890781046,8.28416498802912,0.726511433089237,0.399024873401031,0,0.972426868273176,0,0,0,0.412070114477788,0.320919209591815,0.505394423527595,0,0.188626341386076,0.842773567228942,0.512201219238954,0.34461281373368,0,0.463537303779422,0.192909220463705,0.412085900803307,0.588795680537589,1.02860775715625,1.24233064311536,0.476872379894642,0.145346416632329,0.188218760830661,0.592302255241736,1.82927972872773,0.263069711437843,0.679020569229309,0.561142271657738,0.355905054372522,0.591026894253381,0.409231043169689,0.154936841185966,0.192906610981141,0.249810577937946,0,0.214871054048298,0.191288332068843,0,0.231867835620421
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0,0.34243593645101,0.239316476986009,0,0.34968160967599,0,0,0,0,0.137114433605739,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304130793658544,0.183546752161682,0,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0.257259436035947,0.573066879877513,0,0.606949382578793,4.23192783417626,1.90149421051854,0,0,0,0,0,0,0,1.8664130215526,1.62007125998029,0.841299845405528,1.99955689082663,3.75476519617743,0.734944795289724,0.191690942036473,1.83843757322004,3.30347642998166,11.4918604276669,16.2822925251618,1.31886287730194,2.47016637726506,0,5.02529398202486,4.50210088025344,10.3902808488231,17.6777151284201,11.8168495063255,1.3047961207771,0.075726193333184,0.151143120213571,0,0,0,0.539703191637817,0,0,0.140444420131752,0.852151612890289,0,0.35333957451034,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.520455980298408,0.913396434936424,0.461230994512117,1.20578112442098,0.940709657085638,0.125666591329675,0,0,0,0.161766849947409,0,0,0,1.46390398505774,1.04723353406728,0.255457055208591,0,0,0.127070227073065,2.54644086988199,1.37250180845588,4.27224797183739,1.39059456153821,2.30143911597297,1.24672826735736,1.94689515681309,0.203678727700633,0,0,1.26265113531884,0.260240885925407,0.229902104433473,0.720248519221397,0.60281927134286,0.884474488967262,0.768682321709099,0.937017245597288,4.9153640440413,0.215567992932842,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0.703578179943289,0,0,0.196764231747404,0.154267112887378,0,0.268273401399619,0.116765342367169,0.987359099480883,0.164167464079095,0.0810688095458557,0,0,0,0.841159794256509,4.83651678182637,0,0,0.426576501070468,0.696710015581316,0.128867461322093,0,0,0.190225626112559,0,0.494096864172033,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0,0,0.342745537829186,0,0.814605311381257,0.969762435838129,0.631222379012867,0.316182685621286,0.738050739898011,0.156998727841375,0.123397163921801,0,0.166845105716094,0,0.449724224769707,0.202860121388503,0,0,0,0.648540907100142,0,1.43768206527355,0,0.312037673114561,0,0,0,0,0,0.651859905768103,0.678980343100753,0.234690248288502,0,0,0.585400943573396,0,0.664394068946325,0.318909537314974,0.491589944147214,0.172684981865896,0,0,0,0,0,0.963303539926752,1.05490517932983,0.163934945376675,0,0.315508219416257,0,1.29254038639679,0,0.668396022247182,0.566153061577665,1.21443210502468,1.16902343164525,0,0.963963949265421,0,0,0.651547837414304,0.659880491890142,0,0.242780636154981,0,0.377210159511796,0,0,0.516856586336442,0,0.356497378384721,0,0,0,1.02131881726136,0.540183282093931,0.129358683782755,0.428674070063185,0.886701168211368,1.24858172321449,1.31639216481697,1.2178597964584,0.23467170806371,0,0,0,0,0,0,0,0.291480836629851,1.8542530201051,0.512612642393558,0,0,0.941842285023455,2.46049609897845,0.228778173206523,0.169978429993855,0,0,0,0.158167996790568,0,0.648032044930808,0.836353184057875,0.87345025498471,0.269728692769641,0.0826534557253359,0,0,0,2.81846469342095,0.448549638131936,0,0.194451188344048,0,0.675824501963113,1.29092962510329,0.781226309063701,0.419437377702843,8.45544422891021,4.32045009386798,0,0,0.102710957164827,0.129920822977795,0.179026695667481,0.596044064343795,0.480781798079875,0.295379054349154,0.100966449948148,0.990688486514998,0.302478555410522,0.779663045918019,0.384847366561318,0.350630706544707,0,0,0,0.167884616364078,0.579568782096571,0,0,0,0,16.3778034358949,11.5081309126794,9.73922372846974,6.8741272937475,3.42541259885321,9.82012066606611,4.05013500139084,8.10578165803597,5.43770890781046,8.28416498802912,0.726511433089237,0.399024873401031,0,0.972426868273176,0,0,0,0.412070114477788,0.320919209591815,0.505394423527595,0,0.188626341386076,0.842773567228942,0.512201219238954,0.34461281373368,0,0.463537303779422,0.192909220463705,0.412085900803307,0.588795680537589,1.02860775715625,1.24233064311536,0.476872379894642,0.145346416632329,0.188218760830661,0.592302255241736,1.82927972872773,0.263069711437843,0.679020569229309,0.561142271657738,0.355905054372522,0.591026894253381,0.409231043169689,0.154936841185966,0.192906610981141,0.249810577937946,0,0.214871054048298,0.191288332068843,0,0.231867835620421
|short_description=p3@Ahi1
}}
}}

Latest revision as of 21:13, 25 September 2015

Short description:p3@Ahi1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Ahi1_5end
Coexpression cluster:MCL_coexpression_mm9:145
Association with transcript: 0bp_to_uc007eoe.1_5end
EntrezGene:Ahi1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Ahi1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.35
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E34.23
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.87
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.62
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.75
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.73
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F311.49
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D716.28
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.32
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.47
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.03
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I610.39
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D617.68
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F611.82
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.30
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F51.21
adrenal gland, neonate N00.CNhs11191.1311-23C10.94
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A42.55
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F14.27
cortex, adult.CNhs10473.12-14D51.39
cortex, neonate N30.CNhs11107.1392-42F22.30
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B21.95
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.88
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A24.92
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G14.84
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G70.63
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.74
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.96
medulla oblongata, neonate N30.CNhs11200.1396-42A31.05
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F61.25
pituitary gland, embryo E17.CNhs11039.1265-44F51.32
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C91.85
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H12.46
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G52.82
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B71.29
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H38.46
testis, neonate N30.CNhs11130.1391-42E24.32
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.99
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.78
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A116.38
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A211.51
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A39.74
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.87
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.82
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A78.11
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.44
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A98.28
whole body, embryo E11.CNhs11014.324-5I80.73
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)7.82e-2023
neuroblast (sensu Vertebrata)7.82e-2023
neuron9.01e-1733
neuronal stem cell9.01e-1733
neuroblast9.01e-1733
electrically signaling cell9.01e-1733
electrically responsive cell2.73e-1339
electrically active cell2.73e-1339
neural cell1.60e-1143
ectodermal cell3.91e-1144
neurectodermal cell3.91e-1144

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.52e-4054
central nervous system2.61e-3773
neural tube1.08e-3652
neural rod1.08e-3652
future spinal cord1.08e-3652
neural keel1.08e-3652
nervous system5.38e-3675
neurectoderm2.50e-3364
neural plate2.50e-3364
presumptive neural plate2.50e-3364
gray matter6.62e-3134
ectoderm-derived structure5.83e-2995
ectoderm5.83e-2995
presumptive ectoderm5.83e-2995
regional part of brain2.67e-2846
ecto-epithelium7.44e-2873
anterior neural tube1.08e-2740
brain1.67e-2747
future brain1.67e-2747
regional part of forebrain2.26e-2639
forebrain2.26e-2639
future forebrain2.26e-2639
pre-chordal neural plate1.15e-2449
brain grey matter1.04e-2329
regional part of telencephalon1.04e-2329
telencephalon1.04e-2329
structure with developmental contribution from neural crest5.26e-2192
occipital lobe3.34e-1710
visual cortex3.34e-1710
neocortex3.34e-1710
cerebral cortex1.77e-1521
cerebral hemisphere1.77e-1521
pallium1.77e-1521
regional part of cerebral cortex4.81e-1317
tube4.93e-12114
anatomical conduit1.38e-10122
spinal cord7.61e-106
dorsal region element7.61e-106
dorsum7.61e-106
basal ganglion1.65e-098
nuclear complex of neuraxis1.65e-098
aggregate regional part of brain1.65e-098
collection of basal ganglia1.65e-098
cerebral subcortex1.65e-098
posterior neural tube4.57e-0912
chordal neural plate4.57e-0912
regional part of spinal cord1.18e-085
gray matter of spinal cord1.18e-085
organ system subdivision5.31e-08194
regional part of midbrain1.67e-074
midbrain1.67e-074
presumptive midbrain1.67e-074
midbrain neural tube1.67e-074
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