FFCP PHASE1:Mm9::chr5:115879514..115879526,+: Difference between revisions
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{{FFCP|EntrezGene=17690|HGNC=|MCL_coexpression_id=22|UniProt=Q61474|association_with_transcript=-81bp_to_ENSMUST00000150779_5end|description=CAGE_peak_16_at_Msi1_5end|id=chr5:115879514..115879526,+|ontology_enrichment_celltype=CL:0000117!2.98e-19!23;CL:0000337!2.98e-19!23;CL:0000540!7.03e-14!33;CL:0000047!7.03e-14!33;CL:0000031!7.03e-14!33;CL:0000404!7.03e-14!33;CL:0000393!1.21e-10!39;CL:0000211!1.21e-10!39;CL:0002609!4.28e-09!6;CL:0002319!5.13e-09!43;CL:0000221!1.16e-08!44;CL:0000133!1.16e-08!44;CL:0000055!7.52e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,8.02e-43,23;CL:0000337,8.02e-43,23;CL:0002609,3.48e-32,6;CL:0000540,2.54e-29,33;CL:0000047,2.54e-29,33;CL:0000031,2.54e-29,33;CL:0000404,2.54e-29,33;CL:0000393,1.56e-24,39;CL:0000211,1.56e-24,39;CL:0002319,4.41e-22,43;CL:0000221,1.54e-21,44;CL:0000133,1.54e-21,44;CL:0002608,1.06e-16,3;CL:0002613,2.78e-16,3;CL:0000120,3.53e-16,3;CL:0002321,7.90e-13,70;CL:0000723,2.10e-09,91;CL:0000048,2.10e-09,91;CL:0000034,1.07e-08,97;CL:0002612,1.76e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!3.38e-21!52;UBERON:0005068!3.38e-21!52;UBERON:0006241!3.38e-21!52;UBERON:0007135!3.38e-21!52;UBERON:0002346!4.34e-20!71;UBERON:0003075!4.34e-20!71;UBERON:0007284!4.34e-20!71;UBERON:0001017!6.64e-20!73;UBERON:0005743!6.64e-20!73;UBERON:0000073!5.21e-19!75;UBERON:0001016!5.21e-19!75;UBERON:0003056!3.31e-18!49;UBERON:0000033!1.77e-17!63;UBERON:0002616!4.71e-17!49;UBERON:0000955!1.66e-16!50;UBERON:0006238!1.66e-16!50;UBERON:0004121!1.88e-16!102;UBERON:0000924!1.88e-16!102;UBERON:0006601!1.88e-16!102;UBERON:0003080!2.25e-15!40;UBERON:0002780!1.79e-14!39;UBERON:0001890!1.79e-14!39;UBERON:0006240!1.79e-14!39;UBERON:0002020!4.02e-13!34;UBERON:0007811!2.14e-10!86;UBERON:0002791!3.88e-09!29;UBERON:0003528!3.88e-09!29;UBERON:0001893!3.88e-09!29;UBERON:0000153!1.37e-08!94;UBERON:0000369!3.26e-07!5;UBERON:0002435!3.26e-07!5;UBERON:0000204!3.26e-07!5;UBERON:0010082!3.26e-07!5;UBERON:0002240!5.27e-07!6;UBERON:0005174!5.27e-07!6;UBERON:0001137!5.27e-07!6;UBERON:0001894!8.25e-07!10;UBERON:0006222!8.25e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.31e-28,34;UBERON:0003528,1.07e-24,29;UBERON:0002791,1.07e-24,29;UBERON:0001893,1.07e-24,29;UBERON:0001017,1.01e-18,73;UBERON:0001016,3.61e-18,75;UBERON:0002780,5.95e-18,39;UBERON:0001890,5.95e-18,39;UBERON:0006240,5.95e-18,39;UBERON:0001049,6.56e-18,52;UBERON:0005068,6.56e-18,52;UBERON:0006241,6.56e-18,52;UBERON:0007135,6.56e-18,52;UBERON:0003080,1.84e-17,40;UBERON:0000073,3.55e-17,54;UBERON:0000369,7.18e-17,5;UBERON:0002435,7.18e-17,5;UBERON:0000204,7.18e-17,5;UBERON:0010082,7.18e-17,5;UBERON:0000956,1.77e-15,21;UBERON:0001869,1.77e-15,21;UBERON:0000203,1.77e-15,21;UBERON:0002616,5.75e-15,46;UBERON:0000955,1.30e-14,47;UBERON:0006238,1.30e-14,47;UBERON:0002346,3.42e-14,64;UBERON:0003075,3.42e-14,64;UBERON:0007284,3.42e-14,64;UBERON:0003056,6.01e-14,49;UBERON:0004121,6.62e-14,95;UBERON:0000924,6.62e-14,95;UBERON:0006601,6.62e-14,95;UBERON:0001954,1.56e-12,7;UBERON:0003022,1.56e-12,7;UBERON:0002421,1.56e-12,7;UBERON:0000349,1.56e-12,7;UBERON:0002600,1.56e-12,7;UBERON:0010371,3.36e-12,73;UBERON:0002420,1.24e-10,8;UBERON:0007245,1.24e-10,8;UBERON:0010009,1.24e-10,8;UBERON:0010011,1.24e-10,8;UBERON:0000454,1.24e-10,8;UBERON:0010314,2.90e-09,92;UBERON:0002619,1.08e-07,17;UBERON:0002257,1.76e-07,3;UBERON:0000025,4.49e-07,114|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22548106945558,1.5869729378161,2.53532561402472,0,0,0,0,0,0,0,3.52544681848824,3.37514845829227,2.3135745748652,0.285650984403804,0.220868540951614,3.06226998037385,1.91690942036473,2.75765635983006,0,0.255374676170375,0.614426133024974,2.50583946687368,3.20206752608434,1.04182674111352,0,0,0.15279824777681,0.589257170947335,1.28134512719193,1.3047961207771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0.599162557619291,0.457500602818626,1.7591609295801,0,0.511430914660661,0.62336413367868,0.324482526135515,0.101839363850316,0,0,0,0,0.689706313300419,0.180062129805349,0,0.340182495756639,0.384341160854549,0.187403449119458,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0.210289948564127,2.6755199218614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.586058432961016,0,0,0,0,0.215423397732799,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0.428674070063185,0.177340233642274,0.178368817602071,0.329098041204242,0.304464949114599,0,0,0,0,0,0.120625849856312,0,0,0,0.370850604021019,0,0.412773735926445,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,1.35004500046361,0,0,0.51776031175182,0.207574695168353,0,0.512200817262403,0.729320151204882,0,0.367687016900028,0,0.206035057238894,0.64183841918363,0,0.760437899670719,0.943131706930381,0.468207537349412,0.384150914429216,0.17230640686684,0,0,0.578727661391115,0,0.294397840268795,0,0.177475806159338,0.238436189947321,0,0.282328141245992,0.169229215783353,0.365855945745545,0,0.271608227691724,0,0,0.591026894253381,0,0,0.192906610981141,0.249810577937946,0,0.214871054048298,0,0,0|short_description=p16@Msi1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=17690 | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=Q61474 | |||
|association_with_transcript=-81bp_to_ENSMUST00000150779_5end | |||
|cluster_id=chr5:115879514..115879526,+ | |||
|description=CAGE_peak_16_at_Msi1_5end | |||
|id=chr5:115879514..115879526,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.98e-19!23;CL:0000337!2.98e-19!23;CL:0000540!7.03e-14!33;CL:0000047!7.03e-14!33;CL:0000031!7.03e-14!33;CL:0000404!7.03e-14!33;CL:0000393!1.21e-10!39;CL:0000211!1.21e-10!39;CL:0002609!4.28e-09!6;CL:0002319!5.13e-09!43;CL:0000221!1.16e-08!44;CL:0000133!1.16e-08!44;CL:0000055!7.52e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.02e-43,23;CL:0000337,8.02e-43,23;CL:0002609,3.48e-32,6;CL:0000540,2.54e-29,33;CL:0000047,2.54e-29,33;CL:0000031,2.54e-29,33;CL:0000404,2.54e-29,33;CL:0000393,1.56e-24,39;CL:0000211,1.56e-24,39;CL:0002319,4.41e-22,43;CL:0000221,1.54e-21,44;CL:0000133,1.54e-21,44;CL:0002608,1.06e-16,3;CL:0002613,2.78e-16,3;CL:0000120,3.53e-16,3;CL:0002321,7.90e-13,70;CL:0000723,2.10e-09,91;CL:0000048,2.10e-09,91;CL:0000034,1.07e-08,97;CL:0002612,1.76e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.38e-21!52;UBERON:0005068!3.38e-21!52;UBERON:0006241!3.38e-21!52;UBERON:0007135!3.38e-21!52;UBERON:0002346!4.34e-20!71;UBERON:0003075!4.34e-20!71;UBERON:0007284!4.34e-20!71;UBERON:0001017!6.64e-20!73;UBERON:0005743!6.64e-20!73;UBERON:0000073!5.21e-19!75;UBERON:0001016!5.21e-19!75;UBERON:0003056!3.31e-18!49;UBERON:0000033!1.77e-17!63;UBERON:0002616!4.71e-17!49;UBERON:0000955!1.66e-16!50;UBERON:0006238!1.66e-16!50;UBERON:0004121!1.88e-16!102;UBERON:0000924!1.88e-16!102;UBERON:0006601!1.88e-16!102;UBERON:0003080!2.25e-15!40;UBERON:0002780!1.79e-14!39;UBERON:0001890!1.79e-14!39;UBERON:0006240!1.79e-14!39;UBERON:0002020!4.02e-13!34;UBERON:0007811!2.14e-10!86;UBERON:0002791!3.88e-09!29;UBERON:0003528!3.88e-09!29;UBERON:0001893!3.88e-09!29;UBERON:0000153!1.37e-08!94;UBERON:0000369!3.26e-07!5;UBERON:0002435!3.26e-07!5;UBERON:0000204!3.26e-07!5;UBERON:0010082!3.26e-07!5;UBERON:0002240!5.27e-07!6;UBERON:0005174!5.27e-07!6;UBERON:0001137!5.27e-07!6;UBERON:0001894!8.25e-07!10;UBERON:0006222!8.25e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.31e-28,34;UBERON:0003528,1.07e-24,29;UBERON:0002791,1.07e-24,29;UBERON:0001893,1.07e-24,29;UBERON:0001017,1.01e-18,73;UBERON:0001016,3.61e-18,75;UBERON:0002780,5.95e-18,39;UBERON:0001890,5.95e-18,39;UBERON:0006240,5.95e-18,39;UBERON:0001049,6.56e-18,52;UBERON:0005068,6.56e-18,52;UBERON:0006241,6.56e-18,52;UBERON:0007135,6.56e-18,52;UBERON:0003080,1.84e-17,40;UBERON:0000073,3.55e-17,54;UBERON:0000369,7.18e-17,5;UBERON:0002435,7.18e-17,5;UBERON:0000204,7.18e-17,5;UBERON:0010082,7.18e-17,5;UBERON:0000956,1.77e-15,21;UBERON:0001869,1.77e-15,21;UBERON:0000203,1.77e-15,21;UBERON:0002616,5.75e-15,46;UBERON:0000955,1.30e-14,47;UBERON:0006238,1.30e-14,47;UBERON:0002346,3.42e-14,64;UBERON:0003075,3.42e-14,64;UBERON:0007284,3.42e-14,64;UBERON:0003056,6.01e-14,49;UBERON:0004121,6.62e-14,95;UBERON:0000924,6.62e-14,95;UBERON:0006601,6.62e-14,95;UBERON:0001954,1.56e-12,7;UBERON:0003022,1.56e-12,7;UBERON:0002421,1.56e-12,7;UBERON:0000349,1.56e-12,7;UBERON:0002600,1.56e-12,7;UBERON:0010371,3.36e-12,73;UBERON:0002420,1.24e-10,8;UBERON:0007245,1.24e-10,8;UBERON:0010009,1.24e-10,8;UBERON:0010011,1.24e-10,8;UBERON:0000454,1.24e-10,8;UBERON:0010314,2.90e-09,92;UBERON:0002619,1.08e-07,17;UBERON:0002257,1.76e-07,3;UBERON:0000025,4.49e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22548106945558,1.5869729378161,2.53532561402472,0,0,0,0,0,0,0,3.52544681848824,3.37514845829227,2.3135745748652,0.285650984403804,0.220868540951614,3.06226998037385,1.91690942036473,2.75765635983006,0,0.255374676170375,0.614426133024974,2.50583946687368,3.20206752608434,1.04182674111352,0,0,0.15279824777681,0.589257170947335,1.28134512719193,1.3047961207771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0.599162557619291,0.457500602818626,1.7591609295801,0,0.511430914660661,0.62336413367868,0.324482526135515,0.101839363850316,0,0,0,0,0.689706313300419,0.180062129805349,0,0.340182495756639,0.384341160854549,0.187403449119458,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0.210289948564127,2.6755199218614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.586058432961016,0,0,0,0,0.215423397732799,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0.428674070063185,0.177340233642274,0.178368817602071,0.329098041204242,0.304464949114599,0,0,0,0,0,0.120625849856312,0,0,0,0.370850604021019,0,0.412773735926445,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,1.35004500046361,0,0,0.51776031175182,0.207574695168353,0,0.512200817262403,0.729320151204882,0,0.367687016900028,0,0.206035057238894,0.64183841918363,0,0.760437899670719,0.943131706930381,0.468207537349412,0.384150914429216,0.17230640686684,0,0,0.578727661391115,0,0.294397840268795,0,0.177475806159338,0.238436189947321,0,0.282328141245992,0.169229215783353,0.365855945745545,0,0.271608227691724,0,0,0.591026894253381,0,0,0.192906610981141,0.249810577937946,0,0.214871054048298,0,0,0 | |||
|short_description=p16@Msi1 | |||
}} |
Latest revision as of 17:22, 1 October 2015
Short description: | p16@Msi1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_16_at_Msi1_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | -81bp_to_ENSMUST00000150779_5end |
EntrezGene: | Msi1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.02e-43 | 23 |
neuroblast (sensu Vertebrata) | 8.02e-43 | 23 |
neuron of cerebral cortex | 3.48e-32 | 6 |
neuron | 2.54e-29 | 33 |
neuronal stem cell | 2.54e-29 | 33 |
neuroblast | 2.54e-29 | 33 |
electrically signaling cell | 2.54e-29 | 33 |
electrically responsive cell | 1.56e-24 | 39 |
electrically active cell | 1.56e-24 | 39 |
neural cell | 4.41e-22 | 43 |
ectodermal cell | 1.54e-21 | 44 |
neurectodermal cell | 1.54e-21 | 44 |
hippocampal neuron | 1.06e-16 | 3 |
striatum neuron | 2.78e-16 | 3 |
granule cell | 3.53e-16 | 3 |
embryonic cell | 7.90e-13 | 70 |
somatic stem cell | 2.10e-09 | 91 |
multi fate stem cell | 2.10e-09 | 91 |
stem cell | 1.07e-08 | 97 |
neuron of the ventral spinal cord | 1.76e-07 | 3 |