FFCP PHASE1:Mm9::chr5:8368183..8368216,-: Difference between revisions
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{{FFCP|EntrezGene=11496|HGNC=|MCL_coexpression_id=1|UniProt=|association_with_transcript=-23bp_to_ENSMUST00000143929_5end|description=CAGE_peak_3_at_Adam22_5end|id=chr5:8368183..8368216,-|ontology_enrichment_celltype=CL:0000540!2.70e-13!33;CL:0000047!2.70e-13!33;CL:0000031!2.70e-13!33;CL:0000404!2.70e-13!33;CL:0000117!8.59e-13!23;CL:0000337!8.59e-13!23;CL:0000221!5.48e-11!44;CL:0000133!5.48e-11!44;CL:0002319!8.05e-11!43;CL:0000393!2.42e-09!39;CL:0000211!2.42e-09!39;CL:0000055!2.25e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,5.35e-15,23;CL:0000337,5.35e-15,23;CL:0000540,6.17e-15,33;CL:0000047,6.17e-15,33;CL:0000031,6.17e-15,33;CL:0000404,6.17e-15,33;CL:0000221,3.10e-11,44;CL:0000133,3.10e-11,44;CL:0002319,4.92e-11,43;CL:0000393,1.30e-10,39;CL:0000211,1.30e-10,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.80e-29!73;UBERON:0005743!3.80e-29!73;UBERON:0002346!1.27e-28!71;UBERON:0003075!1.27e-28!71;UBERON:0007284!1.27e-28!71;UBERON:0000073!2.50e-28!75;UBERON:0001016!2.50e-28!75;UBERON:0000033!2.50e-26!63;UBERON:0004121!2.88e-26!102;UBERON:0000924!2.88e-26!102;UBERON:0006601!2.88e-26!102;UBERON:0001049!5.22e-25!52;UBERON:0005068!5.22e-25!52;UBERON:0006241!5.22e-25!52;UBERON:0007135!5.22e-25!52;UBERON:0000955!3.99e-24!50;UBERON:0006238!3.99e-24!50;UBERON:0002616!2.21e-23!49;UBERON:0003056!5.38e-23!49;UBERON:0003080!5.06e-19!40;UBERON:0002780!2.80e-18!39;UBERON:0001890!2.80e-18!39;UBERON:0006240!2.80e-18!39;UBERON:0002020!1.21e-17!34;UBERON:0002791!1.07e-14!29;UBERON:0003528!1.07e-14!29;UBERON:0001893!1.07e-14!29;UBERON:0000153!7.17e-13!94;UBERON:0007811!9.60e-12!86;UBERON:0000956!5.09e-10!21;UBERON:0001869!5.09e-10!21;UBERON:0000203!5.09e-10!21;UBERON:0002619!8.76e-09!17;UBERON:0002021!5.85e-07!10;UBERON:0000411!5.85e-07!10;UBERON:0001950!5.85e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0002346,3.99e-34,64;UBERON:0003075,3.99e-34,64;UBERON:0007284,3.99e-34,64;UBERON:0001017,3.97e-33,73;UBERON:0001016,2.08e-31,75;UBERON:0000073,2.11e-31,54;UBERON:0004121,2.94e-30,95;UBERON:0000924,2.94e-30,95;UBERON:0006601,2.94e-30,95;UBERON:0001049,1.68e-29,52;UBERON:0005068,1.68e-29,52;UBERON:0006241,1.68e-29,52;UBERON:0007135,1.68e-29,52;UBERON:0010371,4.54e-29,73;UBERON:0003056,3.21e-27,49;UBERON:0000955,9.04e-26,47;UBERON:0006238,9.04e-26,47;UBERON:0002616,6.70e-25,46;UBERON:0003080,1.85e-22,40;UBERON:0010314,8.01e-22,92;UBERON:0002780,1.44e-21,39;UBERON:0001890,1.44e-21,39;UBERON:0006240,1.44e-21,39;UBERON:0002020,8.31e-21,34;UBERON:0003528,2.82e-17,29;UBERON:0002791,2.82e-17,29;UBERON:0001893,2.82e-17,29;UBERON:0000956,1.11e-11,21;UBERON:0001869,1.11e-11,21;UBERON:0000203,1.11e-11,21;UBERON:0002619,3.33e-10,17;UBERON:0002021,5.03e-08,10;UBERON:0000411,5.03e-08,10;UBERON:0001950,5.03e-08,10;UBERON:0003076,1.96e-07,12;UBERON:0003057,1.96e-07,12;UBERON:0002420,6.49e-07,8;UBERON:0007245,6.49e-07,8;UBERON:0010009,6.49e-07,8;UBERON:0010011,6.49e-07,8;UBERON:0000454,6.49e-07,8|phase1_expression=1.92178616525753,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0.333109761815663,0.404950534779652,0,0,0,0,3.06155844543851,0,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.367093504323363,3.12956537739216,0.218025156380447,1.09843091367236,1.36100929351998,1.39986421625363,0,0,0,0,0,0,0.515672092277442,10.5204559646991,6.34789175126439,8.87363964908651,1.0165335962074,1.77858959222228,0.449949858640699,0,0,0.898800331555214,0.384218305321555,3.11068836925433,2.16009501330705,2.3135745748652,6.56997264128748,9.93908434282261,5.63457676388789,3.73797336971122,4.5960939330501,23.1243350098716,19.025413374693,25.3450779872802,5.53922408466814,7.86793734980723,5.2091337055676,17.0301629390842,24.1987922313622,16.3494125121187,12.9636577608414,13.6676813567139,10.8111678578674,0.454357159999104,0.453429360640713,0,0,0,0,0,0,0.561777680527007,0,0,0,1.97180787687353,0,0,0,0,0,0,1.02765491747154,0.258937883647172,0.742210695324124,1.21439728736295,2.13125834818499,1.15307748628029,0.904335843315735,1.64624189989987,0.376999773989026,0,0.289198713839823,0.884610551949874,0.161766849947409,0.441683036920787,0,0,10.8328894894272,7.95897485891129,0,0.479260498023681,0.599902730993408,0,28.4602214869163,40.2600530480391,11.4345460422707,18.251553620189,11.7629110371952,24.9345653471472,27.418773458451,1.01839363850316,0.124406970610093,0,1.89397670297827,4.03373373184381,4.59804208866946,3.06105620669094,4.37043971723574,8.16437989815934,6.27757229395764,5.528401749024,8.01980449290949,0.646703978798527,4.72765200419548,3.16712023495108,1.7535658594206,2.50242524303038,2.089512999133,1.4404749548556,1.99034266818493,0,0.257347907114715,0.284163499395593,1.24275463521301,0.703578179943289,0.900310307305074,1.18372367792605,1.57411385397923,0.462801338662135,0,0.804820204198858,1.40118410840603,0.16455984991348,0.492502392237286,0.243206428637567,0.438599962275997,0,0.402619256281115,12.1968170167194,4.83651678182637,0,0,1.91959425481711,3.48355007790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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=11496 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-23bp_to_ENSMUST00000143929_5end | |||
|cluster_id=chr5:8368183..8368216,- | |||
|description=CAGE_peak_3_at_Adam22_5end | |||
|id=chr5:8368183..8368216,- | |||
|ontology_enrichment_celltype=CL:0000540!2.70e-13!33;CL:0000047!2.70e-13!33;CL:0000031!2.70e-13!33;CL:0000404!2.70e-13!33;CL:0000117!8.59e-13!23;CL:0000337!8.59e-13!23;CL:0000221!5.48e-11!44;CL:0000133!5.48e-11!44;CL:0002319!8.05e-11!43;CL:0000393!2.42e-09!39;CL:0000211!2.42e-09!39;CL:0000055!2.25e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.35e-15,23;CL:0000337,5.35e-15,23;CL:0000540,6.17e-15,33;CL:0000047,6.17e-15,33;CL:0000031,6.17e-15,33;CL:0000404,6.17e-15,33;CL:0000221,3.10e-11,44;CL:0000133,3.10e-11,44;CL:0002319,4.92e-11,43;CL:0000393,1.30e-10,39;CL:0000211,1.30e-10,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.80e-29!73;UBERON:0005743!3.80e-29!73;UBERON:0002346!1.27e-28!71;UBERON:0003075!1.27e-28!71;UBERON:0007284!1.27e-28!71;UBERON:0000073!2.50e-28!75;UBERON:0001016!2.50e-28!75;UBERON:0000033!2.50e-26!63;UBERON:0004121!2.88e-26!102;UBERON:0000924!2.88e-26!102;UBERON:0006601!2.88e-26!102;UBERON:0001049!5.22e-25!52;UBERON:0005068!5.22e-25!52;UBERON:0006241!5.22e-25!52;UBERON:0007135!5.22e-25!52;UBERON:0000955!3.99e-24!50;UBERON:0006238!3.99e-24!50;UBERON:0002616!2.21e-23!49;UBERON:0003056!5.38e-23!49;UBERON:0003080!5.06e-19!40;UBERON:0002780!2.80e-18!39;UBERON:0001890!2.80e-18!39;UBERON:0006240!2.80e-18!39;UBERON:0002020!1.21e-17!34;UBERON:0002791!1.07e-14!29;UBERON:0003528!1.07e-14!29;UBERON:0001893!1.07e-14!29;UBERON:0000153!7.17e-13!94;UBERON:0007811!9.60e-12!86;UBERON:0000956!5.09e-10!21;UBERON:0001869!5.09e-10!21;UBERON:0000203!5.09e-10!21;UBERON:0002619!8.76e-09!17;UBERON:0002021!5.85e-07!10;UBERON:0000411!5.85e-07!10;UBERON:0001950!5.85e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,3.99e-34,64;UBERON:0003075,3.99e-34,64;UBERON:0007284,3.99e-34,64;UBERON:0001017,3.97e-33,73;UBERON:0001016,2.08e-31,75;UBERON:0000073,2.11e-31,54;UBERON:0004121,2.94e-30,95;UBERON:0000924,2.94e-30,95;UBERON:0006601,2.94e-30,95;UBERON:0001049,1.68e-29,52;UBERON:0005068,1.68e-29,52;UBERON:0006241,1.68e-29,52;UBERON:0007135,1.68e-29,52;UBERON:0010371,4.54e-29,73;UBERON:0003056,3.21e-27,49;UBERON:0000955,9.04e-26,47;UBERON:0006238,9.04e-26,47;UBERON:0002616,6.70e-25,46;UBERON:0003080,1.85e-22,40;UBERON:0010314,8.01e-22,92;UBERON:0002780,1.44e-21,39;UBERON:0001890,1.44e-21,39;UBERON:0006240,1.44e-21,39;UBERON:0002020,8.31e-21,34;UBERON:0003528,2.82e-17,29;UBERON:0002791,2.82e-17,29;UBERON:0001893,2.82e-17,29;UBERON:0000956,1.11e-11,21;UBERON:0001869,1.11e-11,21;UBERON:0000203,1.11e-11,21;UBERON:0002619,3.33e-10,17;UBERON:0002021,5.03e-08,10;UBERON:0000411,5.03e-08,10;UBERON:0001950,5.03e-08,10;UBERON:0003076,1.96e-07,12;UBERON:0003057,1.96e-07,12;UBERON:0002420,6.49e-07,8;UBERON:0007245,6.49e-07,8;UBERON:0010009,6.49e-07,8;UBERON:0010011,6.49e-07,8;UBERON:0000454,6.49e-07,8 | |||
|phase1_expression=1.92178616525753,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0.333109761815663,0.404950534779652,0,0,0,0,3.06155844543851,0,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.367093504323363,3.12956537739216,0.218025156380447,1.09843091367236,1.36100929351998,1.39986421625363,0,0,0,0,0,0,0.515672092277442,10.5204559646991,6.34789175126439,8.87363964908651,1.0165335962074,1.77858959222228,0.449949858640699,0,0,0.898800331555214,0.384218305321555,3.11068836925433,2.16009501330705,2.3135745748652,6.56997264128748,9.93908434282261,5.63457676388789,3.73797336971122,4.5960939330501,23.1243350098716,19.025413374693,25.3450779872802,5.53922408466814,7.86793734980723,5.2091337055676,17.0301629390842,24.1987922313622,16.3494125121187,12.9636577608414,13.6676813567139,10.8111678578674,0.454357159999104,0.453429360640713,0,0,0,0,0,0,0.561777680527007,0,0,0,1.97180787687353,0,0,0,0,0,0,1.02765491747154,0.258937883647172,0.742210695324124,1.21439728736295,2.13125834818499,1.15307748628029,0.904335843315735,1.64624189989987,0.376999773989026,0,0.289198713839823,0.884610551949874,0.161766849947409,0.441683036920787,0,0,10.8328894894272,7.95897485891129,0,0.479260498023681,0.599902730993408,0,28.4602214869163,40.2600530480391,11.4345460422707,18.251553620189,11.7629110371952,24.9345653471472,27.418773458451,1.01839363850316,0.124406970610093,0,1.89397670297827,4.03373373184381,4.59804208866946,3.06105620669094,4.37043971723574,8.16437989815934,6.27757229395764,5.528401749024,8.01980449290949,0.646703978798527,4.72765200419548,3.16712023495108,1.7535658594206,2.50242524303038,2.089512999133,1.4404749548556,1.99034266818493,0,0.257347907114715,0.284163499395593,1.24275463521301,0.703578179943289,0.900310307305074,1.18372367792605,1.57411385397923,0.462801338662135,0,0.804820204198858,1.40118410840603,0.16455984991348,0.492502392237286,0.243206428637567,0.438599962275997,0,0.402619256281115,12.1968170167194,4.83651678182637,0,0,1.91959425481711,3.48355007790658,0.644337306610467,0.201683524623343,0.667134131534611,0.951128130562796,0,0.164698954724011,0.754005626400808,0.397912944082302,0.779856348476481,0,0,0,1.51734320762465,2.28497025219458,3.38123207019241,3.86937522906097,2.13347735884388,3.0158402552837,2.21327879934901,1.47610147979602,0.941992367048249,0.616985819609003,0,0.166845105716094,0.393117990226406,0.224862112384854,0,0.241177159752417,0.25462585178142,0.287696137450811,0,0,0,0,0.312037673114561,0.252578877947112,0,0,0.184753190166605,1.51593129416388,0.488894929326078,0.169745085775188,0.234690248288502,0.670025029767263,0.476087281772027,0.390267295715598,0.630540576424764,0.8858587585951,0,0.163863314715738,0.172684981865896,0.433947175744535,0,0,0,0,13.6468001489623,19.6915633474901,0,0,0.94652465824877,3.90438744296638,1.29254038639679,1.67278158566786,1.11399337041197,2.26461224631066,2.02405350837447,2.63030272120181,1.58115111178609,20.2432429345738,0.425820255624806,1.95872164033981,1.30309567482861,1.48473110675282,0,0.485561272309963,1.209294227859,0.754420319023592,0.885905678642318,0.307435147943927,1.29214146584111,0.363533729477506,0.712994756769443,0.632073515871632,0,1.03135543248187,5.10659408630682,3.78128297465751,2.58717367565509,2.7863814554107,3.3694644392032,1.60531935841864,3.45552943264454,1.8267896946876,0.23467170806371,0,0.220528398054962,0.49465875882444,1.13025098687134,0.422190474497091,0,0.328281799490123,0,12.9797711407357,0.512612642393558,0.412773735926445,0,0.188368457004691,0.410082683163076,0.228778173206523,1.5298058699447,0.839708713941948,0.552799895217695,0,1.58167996790568,0.609958401380546,0.86404272657441,1.46361807210128,0.655087691238533,0.809186078308924,0.826534557253359,0.523511883968059,0.129614973291793,0,0,1.19613236835183,0.992750942742586,1.75006069509643,0.516639293910924,1.18269287843545,0.938857909166032,1.43224823328345,2.72634295506848,0.966336483304024,0.576060012515731,0,1.01362607645082,0.410843828659309,0,0.358053391334963,0.198681354781265,0.240390899039938,0.147689527174577,0.302899349844443,0,0.100826185136841,0,0.0962118416403295,0,0,0.221985953374065,0.0897138566094757,0,2.89784391048286,0,0,0.643105137237198,0,11.8597886949584,18.4130094602871,9.16632821503035,10.998603669996,7.53590771747707,11.3309084608455,10.8003600037089,9.45674526770863,12.6879874515577,9.31968561153276,1.3492355185943,1.99512436700516,3.24393850932855,2.18796045361465,0.838452650511929,1.65459157605013,1.77797382241292,3.5025959730612,2.56735367673452,3.79045817645696,2.5347929989024,3.58390048633545,1.87283014939765,1.79270426733634,2.1825478203133,2.38146845641537,3.1288768005111,1.15745532278223,2.06042950401653,2.94397840268795,3.42869252385415,3.01708870470874,1.90748951957857,2.90692833264657,1.88218760830661,2.5384382367503,3.65855945745545,2.63069711437843,1.90125759384206,3.36685362994643,2.25406534435931,2.1670986122624,2.86461730218783,2.16911577660352,2.70069255373598,3.49734809113124,1.16965804222704,1.93383948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| |||
|short_description=p3@Adam22 | |||
}} |
Latest revision as of 06:11, 26 September 2015
Short description: | p3@Adam22 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Adam22_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -23bp_to_ENSMUST00000143929_5end |
EntrezGene: | Adam22 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.35e-15 | 23 |
neuroblast (sensu Vertebrata) | 5.35e-15 | 23 |
neuron | 6.17e-15 | 33 |
neuronal stem cell | 6.17e-15 | 33 |
neuroblast | 6.17e-15 | 33 |
electrically signaling cell | 6.17e-15 | 33 |
ectodermal cell | 3.10e-11 | 44 |
neurectodermal cell | 3.10e-11 | 44 |
neural cell | 4.92e-11 | 43 |
electrically responsive cell | 1.30e-10 | 39 |
electrically active cell | 1.30e-10 | 39 |