FFCP PHASE1:Mm9::chr6:115201895..115201906,-: Difference between revisions
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{{FFCP|EntrezGene=110595|HGNC=|MCL_coexpression_id=428|UniProt=Q9JHB3,Q3USH7|association_with_transcript=-28bp_to_ENSMUST00000032462,NM_080639,uc009dip.1,uc009diq.1_5end|description=CAGE_peak_4_at_Timp4_5end|id=chr6:115201895..115201906,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002319,5.20e-09,43;CL:0000221,1.04e-08,44;CL:0000133,1.04e-08,44;CL:0002453,2.56e-08,8;CL:0000117,4.97e-08,23;CL:0000337,4.97e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.90e-14!73;UBERON:0005743!1.90e-14!73;UBERON:0001049!2.01e-14!52;UBERON:0005068!2.01e-14!52;UBERON:0006241!2.01e-14!52;UBERON:0007135!2.01e-14!52;UBERON:0000073!5.92e-14!75;UBERON:0001016!5.92e-14!75;UBERON:0000955!4.20e-13!50;UBERON:0006238!4.20e-13!50;UBERON:0002616!1.70e-12!49;UBERON:0004121!8.76e-12!102;UBERON:0000924!8.76e-12!102;UBERON:0006601!8.76e-12!102;UBERON:0002020!3.17e-11!34;UBERON:0002346!3.18e-10!71;UBERON:0003075!3.18e-10!71;UBERON:0007284!3.18e-10!71;UBERON:0003076!1.37e-09!12;UBERON:0003057!1.37e-09!12;UBERON:0000033!3.98e-09!63;UBERON:0002791!3.60e-08!29;UBERON:0003528!3.60e-08!29;UBERON:0001893!3.60e-08!29;UBERON:0002021!4.54e-08!10;UBERON:0000411!4.54e-08!10;UBERON:0001950!4.54e-08!10;UBERON:0000025!9.53e-08!114;UBERON:0002619!1.26e-07!17;UBERON:0003080!1.84e-07!40;UBERON:0004111!2.50e-07!122;UBERON:0002780!5.47e-07!39;UBERON:0001890!5.47e-07!39;UBERON:0006240!5.47e-07!39|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.70e-29,73;UBERON:0001016,1.88e-28,75;UBERON:0000073,1.26e-26,54;UBERON:0001049,5.83e-24,52;UBERON:0005068,5.83e-24,52;UBERON:0006241,5.83e-24,52;UBERON:0007135,5.83e-24,52;UBERON:0004121,1.98e-20,95;UBERON:0000924,1.98e-20,95;UBERON:0006601,1.98e-20,95;UBERON:0000955,8.62e-19,47;UBERON:0006238,8.62e-19,47;UBERON:0002346,5.24e-18,64;UBERON:0003075,5.24e-18,64;UBERON:0007284,5.24e-18,64;UBERON:0002616,1.47e-17,46;UBERON:0002020,2.35e-17,34;UBERON:0002021,8.16e-17,10;UBERON:0000411,8.16e-17,10;UBERON:0001950,8.16e-17,10;UBERON:0003076,4.84e-15,12;UBERON:0003057,4.84e-15,12;UBERON:0010371,7.68e-15,73;UBERON:0010314,3.03e-14,92;UBERON:0002619,6.57e-13,17;UBERON:0003528,1.50e-12,29;UBERON:0002791,1.50e-12,29;UBERON:0001893,1.50e-12,29;UBERON:0003080,4.42e-12,40;UBERON:0000956,8.83e-12,21;UBERON:0001869,8.83e-12,21;UBERON:0000203,8.83e-12,21;UBERON:0000025,1.18e-11,114;UBERON:0004111,3.22e-11,122;UBERON:0002780,4.39e-11,39;UBERON:0001890,4.39e-11,39;UBERON:0006240,4.39e-11,39;UBERON:0003056,5.48e-09,49;UBERON:0002240,1.46e-08,6;UBERON:0005174,1.46e-08,6;UBERON:0001137,1.46e-08,6;UBERON:0004733,5.32e-08,6;UBERON:0004732,5.32e-08,6;UBERON:0002028,5.32e-08,6;UBERON:0007277,5.32e-08,6;UBERON:0002950,5.54e-08,4;UBERON:0001891,5.54e-08,4;UBERON:0009616,5.54e-08,4;UBERON:0010286,5.54e-08,4;UBERON:0001948,9.17e-07,5;UBERON:0002315,9.17e-07,5|phase1_expression=0,0.348975407639361,0,0,0,0.503637815735669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0.57423196411502,0,0.215471232685889,0,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,4.14247797122848,1.97717564461025,0.777719596297134,1.81982348112971,4.31257693094915,0,0,0,0,0,0.515672092277442,0.809265843438391,1.5869729378161,0,0,0,0,0,0,3.59520132622086,3.45796474789399,0,0,0,4.57041575046086,6.40518768759679,0,0.0958454710182364,0,3.30347642998166,3.19218345212969,2.61131106535614,0.263772575460388,0.182975287204819,0,2.51264699101243,4.50210088025344,3.20876320331301,2.65165726926301,2.42031857358475,0.931997229126503,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.561777680527007,0.170430322578058,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0.346970653532272,0,0.691846491768175,0.301445281105245,0.23517741427141,0.376999773989026,0,2.16899035379867,0.884610551949874,0.161766849947409,0.883366073841574,0.484875253135222,0,1.75668478206928,2.72280718857492,0,0,0,0,2.09706895166752,0.457500602818626,0.753926112677186,2.25971616249959,2.30143911597297,4.98691306942944,2.10913641988085,0.203678727700633,0.373220911830279,0,0,0,0,0,0,0,0,0.187403449119458,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.934122738937356,0.329119699826961,0.820837320395476,1.86458261955468,1.02339991197733,1.09775057645525,3.35516046900929,1.68231958851302,0.514523061896422,0,0,0,0,0.257734922644187,0,0,0,0,0,0,0.198956472041151,0,0.898819408654221,0,0.398282546508734,0,0,0,0,0.193952487167626,0.0701358198903186,0,0,0.156998727841375,0.123397163921801,0,0,0,0,0.202860121388503,0,0,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0,0.739012760666419,0,0.162964976442026,0,0.469380496577004,0.335012514883631,0,0.195133647857799,0.315270288212382,0.221464689648775,0.159454768657487,0.81931657357869,0.172684981865896,0,0,0,0,0.551873492609465,3.37156238974363,3.39913891117389,0.163934945376675,1.51482556322624,0,0,0,0,0,0,0,0,0,2.57057053137446,1.13552068166615,0,0,1.48473110675282,0,0,0,0.754420319023592,0.885905678642318,0.307435147943927,0,0.727067458955011,1.42598951353889,0.316036757935816,0,0,0,0,0.129358683782755,0,0.177340233642274,0,0,0.304464949114599,0,0.21183207086382,2.20528398054962,0.65954501176592,0.645857706783622,0.120625849856312,0.358117032009409,0,0,4.82105785227325,0,0,0,0.188368457004691,0,0,0,0,0,0.954670618015114,0,0,0.108005340821801,0.418176592028937,0.655087691238533,0,0.165306911450672,0.26175594198403,0.259229946583586,0,0,0,0,0,0.258319646955462,0.168956125490778,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0.0974578807397524,0,0,0.680191150845634,0,0,0,0.19318959403219,0,0.183151624267265,0,0,2.25900737046827,4.14292712856459,2.86447756719698,2.06223818812425,5.48066015816514,6.0431511791176,3.37511250115903,1.35096360967266,1.35942722695261,1.03552062350364,0,0,0,0,0,0,0.666740183404846,0.206035057238894,0.320919209591815,0,0,0.377252682772152,0.187283014939765,0.256100609619477,0.0574354689556133,0.476293691283074,0.231768651889711,0.192909220463705,0.412085900803307,0.147198920134397,0.342869252385415,0,0.238436189947321,0.290692833264657,0.188218760830661,0.507687647350059,0.182927972872773,1.05227884575137,0.543216455383447,0,0.355905054372522,0.0985044823755635,0.818462086339379,0.309873682371932,0.385813221962283,0,0.701794825336225,0.429742108096597,0.956441660344217,0.441182838239031,1.39120701372253|short_description=p4@Timp4}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=110595 | |||
|HGNC= | |||
|MCL_coexpression_id=428 | |||
|TSSclassifier=NA | |||
|UniProt=Q9JHB3,Q3USH7 | |||
|association_with_transcript=-28bp_to_ENSMUST00000032462,NM_080639,uc009dip.1,uc009diq.1_5end | |||
|cluster_id=chr6:115201895..115201906,- | |||
|description=CAGE_peak_4_at_Timp4_5end | |||
|id=chr6:115201895..115201906,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,5.20e-09,43;CL:0000221,1.04e-08,44;CL:0000133,1.04e-08,44;CL:0002453,2.56e-08,8;CL:0000117,4.97e-08,23;CL:0000337,4.97e-08,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.90e-14!73;UBERON:0005743!1.90e-14!73;UBERON:0001049!2.01e-14!52;UBERON:0005068!2.01e-14!52;UBERON:0006241!2.01e-14!52;UBERON:0007135!2.01e-14!52;UBERON:0000073!5.92e-14!75;UBERON:0001016!5.92e-14!75;UBERON:0000955!4.20e-13!50;UBERON:0006238!4.20e-13!50;UBERON:0002616!1.70e-12!49;UBERON:0004121!8.76e-12!102;UBERON:0000924!8.76e-12!102;UBERON:0006601!8.76e-12!102;UBERON:0002020!3.17e-11!34;UBERON:0002346!3.18e-10!71;UBERON:0003075!3.18e-10!71;UBERON:0007284!3.18e-10!71;UBERON:0003076!1.37e-09!12;UBERON:0003057!1.37e-09!12;UBERON:0000033!3.98e-09!63;UBERON:0002791!3.60e-08!29;UBERON:0003528!3.60e-08!29;UBERON:0001893!3.60e-08!29;UBERON:0002021!4.54e-08!10;UBERON:0000411!4.54e-08!10;UBERON:0001950!4.54e-08!10;UBERON:0000025!9.53e-08!114;UBERON:0002619!1.26e-07!17;UBERON:0003080!1.84e-07!40;UBERON:0004111!2.50e-07!122;UBERON:0002780!5.47e-07!39;UBERON:0001890!5.47e-07!39;UBERON:0006240!5.47e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.70e-29,73;UBERON:0001016,1.88e-28,75;UBERON:0000073,1.26e-26,54;UBERON:0001049,5.83e-24,52;UBERON:0005068,5.83e-24,52;UBERON:0006241,5.83e-24,52;UBERON:0007135,5.83e-24,52;UBERON:0004121,1.98e-20,95;UBERON:0000924,1.98e-20,95;UBERON:0006601,1.98e-20,95;UBERON:0000955,8.62e-19,47;UBERON:0006238,8.62e-19,47;UBERON:0002346,5.24e-18,64;UBERON:0003075,5.24e-18,64;UBERON:0007284,5.24e-18,64;UBERON:0002616,1.47e-17,46;UBERON:0002020,2.35e-17,34;UBERON:0002021,8.16e-17,10;UBERON:0000411,8.16e-17,10;UBERON:0001950,8.16e-17,10;UBERON:0003076,4.84e-15,12;UBERON:0003057,4.84e-15,12;UBERON:0010371,7.68e-15,73;UBERON:0010314,3.03e-14,92;UBERON:0002619,6.57e-13,17;UBERON:0003528,1.50e-12,29;UBERON:0002791,1.50e-12,29;UBERON:0001893,1.50e-12,29;UBERON:0003080,4.42e-12,40;UBERON:0000956,8.83e-12,21;UBERON:0001869,8.83e-12,21;UBERON:0000203,8.83e-12,21;UBERON:0000025,1.18e-11,114;UBERON:0004111,3.22e-11,122;UBERON:0002780,4.39e-11,39;UBERON:0001890,4.39e-11,39;UBERON:0006240,4.39e-11,39;UBERON:0003056,5.48e-09,49;UBERON:0002240,1.46e-08,6;UBERON:0005174,1.46e-08,6;UBERON:0001137,1.46e-08,6;UBERON:0004733,5.32e-08,6;UBERON:0004732,5.32e-08,6;UBERON:0002028,5.32e-08,6;UBERON:0007277,5.32e-08,6;UBERON:0002950,5.54e-08,4;UBERON:0001891,5.54e-08,4;UBERON:0009616,5.54e-08,4;UBERON:0010286,5.54e-08,4;UBERON:0001948,9.17e-07,5;UBERON:0002315,9.17e-07,5 | |||
|phase1_expression=0,0.348975407639361,0,0,0,0.503637815735669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0.57423196411502,0,0.215471232685889,0,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,4.14247797122848,1.97717564461025,0.777719596297134,1.81982348112971,4.31257693094915,0,0,0,0,0,0.515672092277442,0.809265843438391,1.5869729378161,0,0,0,0,0,0,3.59520132622086,3.45796474789399,0,0,0,4.57041575046086,6.40518768759679,0,0.0958454710182364,0,3.30347642998166,3.19218345212969,2.61131106535614,0.263772575460388,0.182975287204819,0,2.51264699101243,4.50210088025344,3.20876320331301,2.65165726926301,2.42031857358475,0.931997229126503,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.561777680527007,0.170430322578058,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0.346970653532272,0,0.691846491768175,0.301445281105245,0.23517741427141,0.376999773989026,0,2.16899035379867,0.884610551949874,0.161766849947409,0.883366073841574,0.484875253135222,0,1.75668478206928,2.72280718857492,0,0,0,0,2.09706895166752,0.457500602818626,0.753926112677186,2.25971616249959,2.30143911597297,4.98691306942944,2.10913641988085,0.203678727700633,0.373220911830279,0,0,0,0,0,0,0,0,0.187403449119458,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.934122738937356,0.329119699826961,0.820837320395476,1.86458261955468,1.02339991197733,1.09775057645525,3.35516046900929,1.68231958851302,0.514523061896422,0,0,0,0,0.257734922644187,0,0,0,0,0,0,0.198956472041151,0,0.898819408654221,0,0.398282546508734,0,0,0,0,0.193952487167626,0.0701358198903186,0,0,0.156998727841375,0.123397163921801,0,0,0,0,0.202860121388503,0,0,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0,0.739012760666419,0,0.162964976442026,0,0.469380496577004,0.335012514883631,0,0.195133647857799,0.315270288212382,0.221464689648775,0.159454768657487,0.81931657357869,0.172684981865896,0,0,0,0,0.551873492609465,3.37156238974363,3.39913891117389,0.163934945376675,1.51482556322624,0,0,0,0,0,0,0,0,0,2.57057053137446,1.13552068166615,0,0,1.48473110675282,0,0,0,0.754420319023592,0.885905678642318,0.307435147943927,0,0.727067458955011,1.42598951353889,0.316036757935816,0,0,0,0,0.129358683782755,0,0.177340233642274,0,0,0.304464949114599,0,0.21183207086382,2.20528398054962,0.65954501176592,0.645857706783622,0.120625849856312,0.358117032009409,0,0,4.82105785227325,0,0,0,0.188368457004691,0,0,0,0,0,0.954670618015114,0,0,0.108005340821801,0.418176592028937,0.655087691238533,0,0.165306911450672,0.26175594198403,0.259229946583586,0,0,0,0,0,0.258319646955462,0.168956125490778,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0.0974578807397524,0,0,0.680191150845634,0,0,0,0.19318959403219,0,0.183151624267265,0,0,2.25900737046827,4.14292712856459,2.86447756719698,2.06223818812425,5.48066015816514,6.0431511791176,3.37511250115903,1.35096360967266,1.35942722695261,1.03552062350364,0,0,0,0,0,0,0.666740183404846,0.206035057238894,0.320919209591815,0,0,0.377252682772152,0.187283014939765,0.256100609619477,0.0574354689556133,0.476293691283074,0.231768651889711,0.192909220463705,0.412085900803307,0.147198920134397,0.342869252385415,0,0.238436189947321,0.290692833264657,0.188218760830661,0.507687647350059,0.182927972872773,1.05227884575137,0.543216455383447,0,0.355905054372522,0.0985044823755635,0.818462086339379,0.309873682371932,0.385813221962283,0,0.701794825336225,0.429742108096597,0.956441660344217,0.441182838239031,1.39120701372253 | |||
|short_description=p4@Timp4 | |||
}} |
Latest revision as of 11:53, 26 September 2015
Short description: | p4@Timp4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Timp4_5end |
Coexpression cluster: | MCL_coexpression_mm9:428 |
Association with transcript: | -28bp_to_ENSMUST00000032462, NM_080639, uc009dip.1, uc009diq.1_5end |
EntrezGene: | Timp4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 5.20e-09 | 43 |
ectodermal cell | 1.04e-08 | 44 |
neurectodermal cell | 1.04e-08 | 44 |
oligodendrocyte precursor cell | 2.56e-08 | 8 |
CNS neuron (sensu Vertebrata) | 4.97e-08 | 23 |
neuroblast (sensu Vertebrata) | 4.97e-08 | 23 |