FFCP PHASE1:Mm9::chr6:121423648..121423698,-: Difference between revisions
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{{FFCP|EntrezGene=243621|HGNC=|MCL_coexpression_id=1|UniProt=Q3TES0,D6RHQ8|association_with_transcript=0bp_to_ENSMUST00000046373,ENSMUST00000151397,ENSMUST00000152103,NM_001033354,uc009dom.1,uc009don.1,uc009doo.1,uc009dop.1_5end|description=CAGE_peak_1_at_Iqsec3_5end|id=chr6:121423648..121423698,-|ontology_enrichment_celltype=CL:0000540!2.28e-16!33;CL:0000047!2.28e-16!33;CL:0000031!2.28e-16!33;CL:0000404!2.28e-16!33;CL:0000117!1.65e-14!23;CL:0000337!1.65e-14!23;CL:0000393!2.70e-12!39;CL:0000211!2.70e-12!39;CL:0000221!3.11e-12!44;CL:0000133!3.11e-12!44;CL:0002319!7.21e-12!43;CL:0000055!9.39e-09!50|ontology_enrichment_celltype_v019_2=CL:0000117,4.04e-18,23;CL:0000337,4.04e-18,23;CL:0000540,6.06e-17,33;CL:0000047,6.06e-17,33;CL:0000031,6.06e-17,33;CL:0000404,6.06e-17,33;CL:0000393,9.54e-13,39;CL:0000211,9.54e-13,39;CL:0000221,4.46e-11,44;CL:0000133,4.46e-11,44;CL:0002319,1.19e-10,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.05e-31!71;UBERON:0003075!1.05e-31!71;UBERON:0007284!1.05e-31!71;UBERON:0000073!5.75e-31!75;UBERON:0001016!5.75e-31!75;UBERON:0001017!1.08e-30!73;UBERON:0005743!1.08e-30!73;UBERON:0004121!7.29e-30!102;UBERON:0000924!7.29e-30!102;UBERON:0006601!7.29e-30!102;UBERON:0000033!1.25e-25!63;UBERON:0001049!4.10e-25!52;UBERON:0005068!4.10e-25!52;UBERON:0006241!4.10e-25!52;UBERON:0007135!4.10e-25!52;UBERON:0000955!1.42e-23!50;UBERON:0006238!1.42e-23!50;UBERON:0002616!1.05e-22!49;UBERON:0003056!2.15e-21!49;UBERON:0003080!2.00e-18!40;UBERON:0002020!2.40e-18!34;UBERON:0002780!1.30e-17!39;UBERON:0001890!1.30e-17!39;UBERON:0006240!1.30e-17!39;UBERON:0002791!1.46e-14!29;UBERON:0003528!1.46e-14!29;UBERON:0001893!1.46e-14!29;UBERON:0007811!2.58e-13!86;UBERON:0000153!3.03e-10!94;UBERON:0000956!1.33e-09!21;UBERON:0001869!1.33e-09!21;UBERON:0000203!1.33e-09!21;UBERON:0002619!3.27e-08!17;UBERON:0002021!4.97e-08!10;UBERON:0000411!4.97e-08!10;UBERON:0001950!4.97e-08!10;UBERON:0003076!2.92e-07!12;UBERON:0003057!2.92e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.31e-34,64;UBERON:0003075,2.31e-34,64;UBERON:0007284,2.31e-34,64;UBERON:0001017,1.69e-32,73;UBERON:0001016,4.80e-31,75;UBERON:0000073,5.68e-31,54;UBERON:0010371,9.24e-30,73;UBERON:0004121,3.06e-29,95;UBERON:0000924,3.06e-29,95;UBERON:0006601,3.06e-29,95;UBERON:0001049,6.21e-29,52;UBERON:0005068,6.21e-29,52;UBERON:0006241,6.21e-29,52;UBERON:0007135,6.21e-29,52;UBERON:0010314,1.96e-24,92;UBERON:0003056,4.05e-24,49;UBERON:0000955,5.44e-24,47;UBERON:0006238,5.44e-24,47;UBERON:0002020,1.47e-23,34;UBERON:0002616,6.05e-23,46;UBERON:0003080,4.92e-21,40;UBERON:0002780,5.06e-20,39;UBERON:0001890,5.06e-20,39;UBERON:0006240,5.06e-20,39;UBERON:0003528,1.10e-18,29;UBERON:0002791,1.10e-18,29;UBERON:0001893,1.10e-18,29;UBERON:0000956,2.67e-12,21;UBERON:0001869,2.67e-12,21;UBERON:0000203,2.67e-12,21;UBERON:0002619,1.57e-10,17;UBERON:0002021,7.75e-10,10;UBERON:0000411,7.75e-10,10;UBERON:0001950,7.75e-10,10;UBERON:0003076,2.61e-08,12;UBERON:0003057,2.61e-08,12;UBERON:0002420,9.66e-08,8;UBERON:0007245,9.66e-08,8;UBERON:0010009,9.66e-08,8;UBERON:0010011,9.66e-08,8;UBERON:0000454,9.66e-08,8;UBERON:0002240,2.98e-07,6;UBERON:0005174,2.98e-07,6;UBERON:0001137,2.98e-07,6|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.35476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0.257259436035947,0,0,17.8038485556446,18.5146842745212,20.2826049121977,0,0,0,0,0,0.299600110518405,0,1.65903379693564,3.24014251996058,1.47227472945967,52.2741301458961,54.1127925331453,3.91970557487853,2.49198224647415,5.51531271966013,91.3961812294926,45.7120670344972,44.6995011775669,17.8046488435762,16.6507511356386,13.022834263919,68.6790177543397,36.5795696520592,42.63071112973,55.6848026545232,46.4131679405076,34.4838974776806,0.757261933331841,0.604572480854284,0,0,0,0.539703191637817,0,0,1.82577746171277,0,0,0,2.95771181531029,0,0,0,0,0,0,0.91347103775248,0,3.56261133755579,1.04091196059682,1.82679286987285,0.230615497256059,1.65794904607885,1.52865319276416,1.50799909595611,0,0,0,0,0,0,0,19.6163133997737,24.9241581108012,0.510914110417183,0,0,0,69.3530660444329,37.972550033946,13.9476330845279,44.6728502894151,30.6858548796397,40.3108806445547,34.8818715595679,0,0,0,9.04899980311838,0,0.689706313300419,1.98068342785884,7.68594570962147,17.6214532801939,14.2206229516183,17.1474155944304,30.2682943764648,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0.232533944750408,0,0.116765342367169,0,0,0.0810688095458557,0,0,0,44.1608891984667,7.71784592844633,0,0.264450566663544,0.213288250535234,0.232236671860439,0.257734922644187,0.605050573870028,0,0.760902504450237,0,0.164698954724011,1.00534083520108,0.596869416123452,0.779856348476481,1.79763881730844,0.216138049874694,0,0.189667900953082,0.571242563048644,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0,65.8257418949947,66.8106613575558,0,0,3.47059041357882,4.29482618726302,10.1248996934415,0.238968797952552,0.222798674082394,0.566153061577665,0.809621403349789,4.09158201075837,1.97643888973262,90.9339325473714,0,0.178065603667255,0.162886959353576,0,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0,0,0.363533729477506,0,0.632073515871632,0,0,15.6602218646742,0.540183282093931,0.388076051348264,0.214337035031592,1.24138163549592,1.07021290561242,4.77192159746151,7.00269382963578,0,0,0.220528398054962,0,0,0,0,0,0,71.3887412740462,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0,0.418176592028937,0.218362563746178,0.809186078308924,0.991841468704031,0,0.388844919875379,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0.167884616364078,0.386379188064381,0,0,0,0,21.4605700194485,32.6830917920096,25.7802981047728,28.6994814513958,31.5137959094495,49.1006033303305,37.1262375127493,36.4760174611619,47.1268105343573,41.4208249401456,0.207574695168353,1.19707462020309,2.21953687480374,2.18796045361465,5.8691685535835,2.94149613520023,2.889207461421,2.47242068686673,5.77654577265267,3.79045817645696,3.29523089857312,2.45214243801899,2.24739617927718,3.20125762024346,2.29741875822453,2.85776214769844,1.97003354106254,2.70072908649187,1.23625770240992,2.50238164228475,3.08582327146874,1.95223386775271,2.14592570952589,3.0522747492789,2.1645157495526,2.96151127620868,2.74391959309159,1.57841826862706,2.8518863907631,5.61142271657738,2.60997039873183,2.36410757701352,2.04615521584845,2.01417893541756,3.47231899766054,7.74412791607632,0.935726433781634,3.22306581072447,3.63447830930802,0.882365676478062,1.15933917810211|short_description=p1@Iqsec3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=243621 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q3TES0,D6RHQ8 | |||
|association_with_transcript=0bp_to_ENSMUST00000046373,ENSMUST00000151397,ENSMUST00000152103,NM_001033354,uc009dom.1,uc009don.1,uc009doo.1,uc009dop.1_5end | |||
|cluster_id=chr6:121423648..121423698,- | |||
|description=CAGE_peak_1_at_Iqsec3_5end | |||
|id=chr6:121423648..121423698,- | |||
|ontology_enrichment_celltype=CL:0000540!2.28e-16!33;CL:0000047!2.28e-16!33;CL:0000031!2.28e-16!33;CL:0000404!2.28e-16!33;CL:0000117!1.65e-14!23;CL:0000337!1.65e-14!23;CL:0000393!2.70e-12!39;CL:0000211!2.70e-12!39;CL:0000221!3.11e-12!44;CL:0000133!3.11e-12!44;CL:0002319!7.21e-12!43;CL:0000055!9.39e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.04e-18,23;CL:0000337,4.04e-18,23;CL:0000540,6.06e-17,33;CL:0000047,6.06e-17,33;CL:0000031,6.06e-17,33;CL:0000404,6.06e-17,33;CL:0000393,9.54e-13,39;CL:0000211,9.54e-13,39;CL:0000221,4.46e-11,44;CL:0000133,4.46e-11,44;CL:0002319,1.19e-10,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.05e-31!71;UBERON:0003075!1.05e-31!71;UBERON:0007284!1.05e-31!71;UBERON:0000073!5.75e-31!75;UBERON:0001016!5.75e-31!75;UBERON:0001017!1.08e-30!73;UBERON:0005743!1.08e-30!73;UBERON:0004121!7.29e-30!102;UBERON:0000924!7.29e-30!102;UBERON:0006601!7.29e-30!102;UBERON:0000033!1.25e-25!63;UBERON:0001049!4.10e-25!52;UBERON:0005068!4.10e-25!52;UBERON:0006241!4.10e-25!52;UBERON:0007135!4.10e-25!52;UBERON:0000955!1.42e-23!50;UBERON:0006238!1.42e-23!50;UBERON:0002616!1.05e-22!49;UBERON:0003056!2.15e-21!49;UBERON:0003080!2.00e-18!40;UBERON:0002020!2.40e-18!34;UBERON:0002780!1.30e-17!39;UBERON:0001890!1.30e-17!39;UBERON:0006240!1.30e-17!39;UBERON:0002791!1.46e-14!29;UBERON:0003528!1.46e-14!29;UBERON:0001893!1.46e-14!29;UBERON:0007811!2.58e-13!86;UBERON:0000153!3.03e-10!94;UBERON:0000956!1.33e-09!21;UBERON:0001869!1.33e-09!21;UBERON:0000203!1.33e-09!21;UBERON:0002619!3.27e-08!17;UBERON:0002021!4.97e-08!10;UBERON:0000411!4.97e-08!10;UBERON:0001950!4.97e-08!10;UBERON:0003076!2.92e-07!12;UBERON:0003057!2.92e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.31e-34,64;UBERON:0003075,2.31e-34,64;UBERON:0007284,2.31e-34,64;UBERON:0001017,1.69e-32,73;UBERON:0001016,4.80e-31,75;UBERON:0000073,5.68e-31,54;UBERON:0010371,9.24e-30,73;UBERON:0004121,3.06e-29,95;UBERON:0000924,3.06e-29,95;UBERON:0006601,3.06e-29,95;UBERON:0001049,6.21e-29,52;UBERON:0005068,6.21e-29,52;UBERON:0006241,6.21e-29,52;UBERON:0007135,6.21e-29,52;UBERON:0010314,1.96e-24,92;UBERON:0003056,4.05e-24,49;UBERON:0000955,5.44e-24,47;UBERON:0006238,5.44e-24,47;UBERON:0002020,1.47e-23,34;UBERON:0002616,6.05e-23,46;UBERON:0003080,4.92e-21,40;UBERON:0002780,5.06e-20,39;UBERON:0001890,5.06e-20,39;UBERON:0006240,5.06e-20,39;UBERON:0003528,1.10e-18,29;UBERON:0002791,1.10e-18,29;UBERON:0001893,1.10e-18,29;UBERON:0000956,2.67e-12,21;UBERON:0001869,2.67e-12,21;UBERON:0000203,2.67e-12,21;UBERON:0002619,1.57e-10,17;UBERON:0002021,7.75e-10,10;UBERON:0000411,7.75e-10,10;UBERON:0001950,7.75e-10,10;UBERON:0003076,2.61e-08,12;UBERON:0003057,2.61e-08,12;UBERON:0002420,9.66e-08,8;UBERON:0007245,9.66e-08,8;UBERON:0010009,9.66e-08,8;UBERON:0010011,9.66e-08,8;UBERON:0000454,9.66e-08,8;UBERON:0002240,2.98e-07,6;UBERON:0005174,2.98e-07,6;UBERON:0001137,2.98e-07,6 | |||
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.35476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0.257259436035947,0,0,17.8038485556446,18.5146842745212,20.2826049121977,0,0,0,0,0,0.299600110518405,0,1.65903379693564,3.24014251996058,1.47227472945967,52.2741301458961,54.1127925331453,3.91970557487853,2.49198224647415,5.51531271966013,91.3961812294926,45.7120670344972,44.6995011775669,17.8046488435762,16.6507511356386,13.022834263919,68.6790177543397,36.5795696520592,42.63071112973,55.6848026545232,46.4131679405076,34.4838974776806,0.757261933331841,0.604572480854284,0,0,0,0.539703191637817,0,0,1.82577746171277,0,0,0,2.95771181531029,0,0,0,0,0,0,0.91347103775248,0,3.56261133755579,1.04091196059682,1.82679286987285,0.230615497256059,1.65794904607885,1.52865319276416,1.50799909595611,0,0,0,0,0,0,0,19.6163133997737,24.9241581108012,0.510914110417183,0,0,0,69.3530660444329,37.972550033946,13.9476330845279,44.6728502894151,30.6858548796397,40.3108806445547,34.8818715595679,0,0,0,9.04899980311838,0,0.689706313300419,1.98068342785884,7.68594570962147,17.6214532801939,14.2206229516183,17.1474155944304,30.2682943764648,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0.232533944750408,0,0.116765342367169,0,0,0.0810688095458557,0,0,0,44.1608891984667,7.71784592844633,0,0.264450566663544,0.213288250535234,0.232236671860439,0.257734922644187,0.605050573870028,0,0.760902504450237,0,0.164698954724011,1.00534083520108,0.596869416123452,0.779856348476481,1.79763881730844,0.216138049874694,0,0.189667900953082,0.571242563048644,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0,65.8257418949947,66.8106613575558,0,0,3.47059041357882,4.29482618726302,10.1248996934415,0.238968797952552,0.222798674082394,0.566153061577665,0.809621403349789,4.09158201075837,1.97643888973262,90.9339325473714,0,0.178065603667255,0.162886959353576,0,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0,0,0.363533729477506,0,0.632073515871632,0,0,15.6602218646742,0.540183282093931,0.388076051348264,0.214337035031592,1.24138163549592,1.07021290561242,4.77192159746151,7.00269382963578,0,0,0.220528398054962,0,0,0,0,0,0,71.3887412740462,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0,0.418176592028937,0.218362563746178,0.809186078308924,0.991841468704031,0,0.388844919875379,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0.167884616364078,0.386379188064381,0,0,0,0,21.4605700194485,32.6830917920096,25.7802981047728,28.6994814513958,31.5137959094495,49.1006033303305,37.1262375127493,36.4760174611619,47.1268105343573,41.4208249401456,0.207574695168353,1.19707462020309,2.21953687480374,2.18796045361465,5.8691685535835,2.94149613520023,2.889207461421,2.47242068686673,5.77654577265267,3.79045817645696,3.29523089857312,2.45214243801899,2.24739617927718,3.20125762024346,2.29741875822453,2.85776214769844,1.97003354106254,2.70072908649187,1.23625770240992,2.50238164228475,3.08582327146874,1.95223386775271,2.14592570952589,3.0522747492789,2.1645157495526,2.96151127620868,2.74391959309159,1.57841826862706,2.8518863907631,5.61142271657738,2.60997039873183,2.36410757701352,2.04615521584845,2.01417893541756,3.47231899766054,7.74412791607632,0.935726433781634,3.22306581072447,3.63447830930802,0.882365676478062,1.15933917810211 | |||
|short_description=p1@Iqsec3 | |||
}} |
Latest revision as of 14:20, 26 September 2015
Short description: | p1@Iqsec3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Iqsec3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000046373, ENSMUST00000151397, ENSMUST00000152103, NM_001033354, uc009dom.1, uc009don.1, uc009doo.1, uc009dop.1_5end |
EntrezGene: | Iqsec3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.04e-18 | 23 |
neuroblast (sensu Vertebrata) | 4.04e-18 | 23 |
neuron | 6.06e-17 | 33 |
neuronal stem cell | 6.06e-17 | 33 |
neuroblast | 6.06e-17 | 33 |
electrically signaling cell | 6.06e-17 | 33 |
electrically responsive cell | 9.54e-13 | 39 |
electrically active cell | 9.54e-13 | 39 |
ectodermal cell | 4.46e-11 | 44 |
neurectodermal cell | 4.46e-11 | 44 |
neural cell | 1.19e-10 | 43 |