FFCP PHASE1:Hg19::chr9:75567962..75567979,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=216 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=402 | |||
|TSSclassifier=strong | |||
|UniProt=P00352,Q5SYQ9 | |||
|association_with_transcript=0bp_to_ENST00000297785,ENST00000376939,ENST00000428593,uc004ajd.2_5end | |||
|cluster_id=chr9:75567962..75567979,- | |||
|coexpression_cluster_id=C4830 | |||
|description=CAGE_peak_1_at_ALDH1A1_5end | |||
|id=chr9:75567962..75567979,- | |||
|ontology_enrichment_celltype=CL:0000839!1.31e-11!70;CL:0002139!1.32e-10!24;CL:0000557!3.12e-10!71;CL:0000115!5.24e-10!35;CL:0000766!5.46e-10!76;CL:0002057!2.16e-09!42;CL:0002194!3.39e-09!63;CL:0000576!3.39e-09!63;CL:0000040!3.39e-09!63;CL:0000559!3.39e-09!63;CL:0002009!3.04e-08!65;CL:0000860!1.32e-07!45;CL:0000071!2.59e-07!18;CL:0002546!2.59e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.21e-11;24!CL:0000473;1.37e-09;39!CL:0000234;1.37e-09;39!CL:0000115;3.59e-09;36!CL:0000860;1.41e-08;33!CL:0002057;1.41e-08;33!CL:0000071;1.06e-07;18!CL:0000576;3.77e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000839,1.44e-14,66;CL:0000557,4.53e-13,67;CL:0000473,1.49e-12,48;CL:0000234,1.49e-12,48;CL:0000766,1.86e-12,72;CL:0002194,8.65e-12,59;CL:0000576,8.65e-12,59;CL:0000040,8.65e-12,59;CL:0000559,8.65e-12,59;CL:0002139,3.16e-11,24;CL:0000115,7.85e-11,36;CL:0002009,9.47e-11,61;CL:0000860,6.25e-10,42;CL:0002057,6.25e-10,42;CL:0000763,1.76e-08,108;CL:0000049,1.76e-08,108;CL:0000071,1.04e-07,18;CL:0002546,1.04e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002546;1.06e-07;18!CL:0002057;1.39e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!3.67e-18!659;UBERON:0007023!1.35e-15!115;UBERON:0000467!4.12e-15!625;UBERON:0000480!7.55e-15!626;UBERON:0002405!1.74e-14!115;UBERON:0000922!2.61e-13!612;UBERON:0000490!9.22e-13!138;UBERON:0002050!2.89e-12!605;UBERON:0005423!2.89e-12!605;UBERON:0000923!5.95e-12!604;UBERON:0005291!5.95e-12!604;UBERON:0006598!5.95e-12!604;UBERON:0002532!5.95e-12!604;UBERON:0000926!7.23e-12!448;UBERON:0004120!7.23e-12!448;UBERON:0006603!7.23e-12!448;UBERON:0003081!3.41e-11!216;UBERON:0002193!6.50e-10!112;UBERON:0004111!3.84e-09!241;UBERON:0000055!1.66e-08!69;UBERON:0002371!4.67e-08!80;UBERON:0002390!8.53e-08!102;UBERON:0003061!8.53e-08!102;UBERON:0002049!1.54e-07!79;UBERON:0007798!1.54e-07!79;UBERON:0001986!2.59e-07!18;UBERON:0004638!2.59e-07!18;UBERON:0004852!2.59e-07!18;UBERON:0004921!3.68e-07!129;UBERON:0004185!3.68e-07!129;UBERON:0001981!3.84e-07!60;UBERON:0007500!3.84e-07!60;UBERON:0004537!3.84e-07!60;UBERON:0006965!3.84e-07!60;UBERON:0001009!7.14e-07!113;UBERON:0000025!8.05e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.06e-07;18!UBERON:0001986;1.06e-07;18!UBERON:0004852;1.06e-07;18!UBERON:0005409;6.40e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.93e-15,114;UBERON:0003081,6.50e-14,203;UBERON:0000923,3.25e-13,560;UBERON:0010316,3.25e-13,560;UBERON:0005291,3.25e-13,560;UBERON:0006598,3.25e-13,560;UBERON:0010317,3.25e-13,560;UBERON:0002532,3.25e-13,560;UBERON:0002050,6.15e-13,564;UBERON:0000922,1.12e-12,592;UBERON:0005423,1.45e-12,581;UBERON:0002193,1.69e-12,108;UBERON:0002405,2.56e-12,93;UBERON:0000926,6.63e-12,315;UBERON:0004120,6.63e-12,315;UBERON:0006603,6.63e-12,315;UBERON:0002371,2.16e-10,76;UBERON:0002390,5.62e-10,98;UBERON:0003061,5.62e-10,98;UBERON:0000490,4.25e-09,148;UBERON:0000055,1.19e-08,68;UBERON:0001474,4.12e-08,82;UBERON:0002049,8.18e-08,78;UBERON:0007798,8.18e-08,78;UBERON:0004638,1.04e-07,18;UBERON:0001986,1.04e-07,18;UBERON:0004852,1.04e-07,18;UBERON:0004111,4.42e-07,240;UBERON:0007500,4.60e-07,59;UBERON:0001981,4.60e-07,59;UBERON:0004537,4.60e-07,59;UBERON:0006965,4.60e-07,59;UBERON:0004921,4.94e-07,118;UBERON:0001009,6.79e-07,112 | |||
|phase1_expression=79.2117733619627,18.1985445307336,106.843438304746,32.0234554730017,143.921472405587,10.4680622892044,2.53299878168311,2.52687949370732,4.96252693579693,0.737201809504527,0,0,0,0,0,2.6893005858071,0,0,0,0,0,0,0.572471974262113,2.46373965131192,0,0,0,0,27.1421351025744,19.1914699048606,30.8084085398991,0.919421224478927,0.90361775633475,0.739508020333575,0.0774672005803016,0,82.7953238924269,46.5356143166777,27.8756781983497,25.6072827444705,1031.80250529757,584.628067164258,778.650940958146,35.7679667397729,23.4283085087062,13.5847074265177,52.7613913775904,36.1827741459207,42.1200664417341,56.9630936797858,52.7691055449947,51.7896083456002,69.2938818280603,45.1839278508678,47.3992703080196,37.2719832294357,21.8324920046277,20.8992840533929,57.5437717657297,35.9440510325225,20.4587880255693,41.8911151237129,40.6905861548129,35.3766542942136,55.139755339431,27.8018760098659,22.4216009638407,47.4859977335245,50.0623601683393,57.9894215362661,54.4859552370032,54.5050901261596,39.8742608175514,14.9991253281479,22.5360557962946,55.5595410597196,97.7259090974507,120.742221844571,126.008859970511,1.42506371870624,1.59133341759272,5.11459630540975,0,0,1.77901850772711,6.82768356106412,0.400395987036012,0,1.32208974556972,0,0,0.587237189370939,0.764546456250458,72.6942307184642,45.961702164486,58.7346509048422,0,0.393010762749165,0.616804496998528,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0.14828656316206,0.267540828089713,0,0,0,0,0,0.637130828648193,0,0,4.06552821509986,2.68771883424279,3.74792179657038,4.49876778883632,0.821127996921047,0,0,0,17.0664806419773,0,1.91793842765295,0,0,0,0,0,367.17322986524,110.642969333819,94.3345598344174,126.722255544037,0.728590576585084,6.67411997011973,22.7183175558278,21.0696982132113,56.9060071020743,3.33886874027479,1.71598473234038,0.74291500265913,32.7957972155063,42.1514951602001,34.7140501607594,76.8818801016653,59.9884193780165,88.3128914627617,63.3254748606536,174.172895680128,102.104917391086,372.544042007078,358.518092227141,2074.0223044001,291.166034654966,53.6788097304968,145.015408670835,318.532130789313,135.615741066207,110.134027912689,27.596994743859,23.7316414892032,7.87767498900751,2.63560834872127,0,0,0,22.286970052966,0,0.860509862246441,2.12801029319014,2.24271040056923,1.06748995729705,0.49333509683432,0.622422070799533,0.269421344139376,0.326923806226917,0,0,0.234321431833797,0,6.84566185853339,0.149448680551801,0,0,0,0,0,0.103325781175765,1.18800285728205,1.97813543422845,0,1.43723628363248,0,0.125118519871964,0,0,0,0.300476117813194,7.25965972224135,1.61450672119976,0.213557388818567,0.211931901159562,0,0,63.1219323111791,38.1539555479759,24.8101208394661,38.7799280541571,0,1.74894807420369,2.90962902273861,0,0,14.7517715310124,0,0,0,1.70763188581434,0.397589304964456,18.5910308591229,35.2447587052259,6.05570042101508,0.72995471815166,0,0,0,7.89425477654364,3.60939740834793,0,0,0,0,0,0,0,0,0,110.723318193697,2.80483547606892,9.0546282492908,1.47008711385542,721.236148136218,348.903661920557,325.525238581454,0,289.883749646119,125.587637138521,0.109750285408626,0,0.201057944823262,1.29623823221941,0,1.03993478527958,17.3197610430328,346.052258850604,38.9796864862928,834.726800954529,362.05467083491,720.872982816893,0,0,265.914366574389,38.6107037479742,45.0352421734847,0,0.503946384596579,0.708875486211932,0,0,3.4504441124869,738.009530368123,482.769563694518,140.983118567725,216.75640993911,104.781219743895,0,0,1.17217447210047,6.84289784090821,0,0,0,0,0,0,0.646358578788889,0,0,596.499195499865,517.957035818603,0,0,0,86.9306201441537,30.9294315073123,35.3993344815731,0.65147236858747,86.3602435444386,52.2688236136063,0.301439377059586,0,0,451.224226178817,427.42078480874,221.375636457183,0,0,52.7756548650658,261.185477228313,216.777520290655,472.183760063605,0.448340575974109,1.57624608161542,0,0.77005821767849,0,0,0,0.167516265334349,0.637938751653163,0,0,0.828831026872071,0.12269149171914,0.500170521059677,0,0,0,0,0,0,0,0,0,0,337.19530775063,0.195801157462741,0.343143423810856,34.7370283886451,21.7871342826803,22.092604465313,0,0,0.30239029332968,2.48107807818777,5.52463103837025,1.68396056659844,26.6529430451858,17.3980464682679,11.903190164627,2.96836132889982,0,0,0.492762936082855,0,0.116210378459959,99.1047486651302,0.40101294060657,2.94659164594868,321.02119706824,0.728364672026868,415.402146591456,0.902399225814824,5.2370429231002,0,0,0.422206515571503,2.27466768141793,3.91215522135986,34.114714744138,16.9649977959318,0,0,2.03901018436031,1.66215201785745,0,25.8726654442203,30.3265123188885,0.769350375349168,30.1773474043729,23.1018660211655,547.559935895996,0,0,0,0.650060246036521,30.5299466703903,23.2976431084014,2.46477787383431,6.60065801322357,8.95937721149449,1.71872391789238,4.49551751134108,5.79541066429486,25.4631621949669,0.661139661443912,2.11409074101617,1.40373983744043,2.2254711788221,1.85938219718914,5.03699754929024,20.2140808346574,35.1158281400741,3.72614221221915,13.0489948811261,42.9952188321094,2.146873301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| |||
|short_description=p1@ALDH1A1 | |||
}} |
Latest revision as of 20:11, 17 September 2015
Short description: | p1@ALDH1A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ALDH1A1_5end |
Coexpression cluster: | C4830_small_lung_gastric_hepatoma_Endothelial_mesothelioma_adrenal |
Association with transcript: | 0bp_to_ENST00000297785, ENST00000376939, ENST00000428593, uc004ajd.2_5end |
EntrezGene: | ALDH1A1 |
HGNC: | 402 |
UniProt: | P00352Q5SYQ9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid lineage restricted progenitor cell | 1.44e-14 | 66 |
granulocyte monocyte progenitor cell | 4.53e-13 | 67 |
defensive cell | 1.49e-12 | 48 |
phagocyte | 1.49e-12 | 48 |
myeloid leukocyte | 1.86e-12 | 72 |
monopoietic cell | 8.65e-12 | 59 |
monocyte | 8.65e-12 | 59 |
monoblast | 8.65e-12 | 59 |
promonocyte | 8.65e-12 | 59 |
endothelial cell of vascular tree | 3.16e-11 | 24 |
endothelial cell | 7.85e-11 | 36 |
macrophage dendritic cell progenitor | 9.47e-11 | 61 |
classical monocyte | 6.25e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.25e-10 | 42 |
myeloid cell | 1.76e-08 | 108 |
common myeloid progenitor | 1.76e-08 | 108 |
blood vessel endothelial cell | 1.04e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.04e-07 | 18 |