FFCP PHASE1:Mm9::chr6:30754795..30754817,+: Difference between revisions
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{{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=145|UniProt=|association_with_transcript=11bp_to_uc009bfw.1_5end|description=CAGE_peak_2_at_uc009bfw.1_5end|id=chr6:30754795..30754817,+|ontology_enrichment_celltype=CL:0000117!1.06e-13!23;CL:0000337!1.06e-13!23;CL:0000540!9.56e-08!33;CL:0000047!9.56e-08!33;CL:0000031!9.56e-08!33;CL:0000404!9.56e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,1.92e-20,23;CL:0000337,1.92e-20,23;CL:0000540,2.35e-12,33;CL:0000047,2.35e-12,33;CL:0000031,2.35e-12,33;CL:0000404,2.35e-12,33;CL:0000393,1.50e-09,39;CL:0000211,1.50e-09,39;CL:0002319,3.87e-08,43;CL:0000221,7.89e-08,44;CL:0000133,7.89e-08,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.21e-18!52;UBERON:0005068!1.21e-18!52;UBERON:0006241!1.21e-18!52;UBERON:0007135!1.21e-18!52;UBERON:0002020!5.58e-18!34;UBERON:0000955!3.55e-17!50;UBERON:0006238!3.55e-17!50;UBERON:0002616!1.14e-16!49;UBERON:0002346!5.12e-16!71;UBERON:0003075!5.12e-16!71;UBERON:0007284!5.12e-16!71;UBERON:0000033!8.04e-16!63;UBERON:0001017!1.10e-15!73;UBERON:0005743!1.10e-15!73;UBERON:0000073!1.20e-14!75;UBERON:0001016!1.20e-14!75;UBERON:0003056!2.02e-14!49;UBERON:0002791!2.45e-14!29;UBERON:0003528!2.45e-14!29;UBERON:0001893!2.45e-14!29;UBERON:0003080!6.54e-14!40;UBERON:0002780!2.76e-13!39;UBERON:0001890!2.76e-13!39;UBERON:0006240!2.76e-13!39;UBERON:0004121!5.35e-13!102;UBERON:0000924!5.35e-13!102;UBERON:0006601!5.35e-13!102;UBERON:0000025!1.61e-10!114;UBERON:0000956!4.03e-09!21;UBERON:0001869!4.03e-09!21;UBERON:0000203!4.03e-09!21;UBERON:0002021!5.26e-09!10;UBERON:0000411!5.26e-09!10;UBERON:0001950!5.26e-09!10;UBERON:0004111!1.50e-08!122;UBERON:0002619!1.55e-07!17;UBERON:0007811!1.90e-07!86;UBERON:0002420!9.69e-07!8;UBERON:0007245!9.69e-07!8;UBERON:0010009!9.69e-07!8;UBERON:0010011!9.69e-07!8;UBERON:0000454!9.69e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.18e-30,54;UBERON:0002020,2.33e-29,34;UBERON:0001049,4.36e-27,52;UBERON:0005068,4.36e-27,52;UBERON:0006241,4.36e-27,52;UBERON:0007135,4.36e-27,52;UBERON:0001017,6.53e-26,73;UBERON:0001016,7.21e-25,75;UBERON:0003528,6.57e-23,29;UBERON:0002791,6.57e-23,29;UBERON:0001893,6.57e-23,29;UBERON:0002346,3.91e-21,64;UBERON:0003075,3.91e-21,64;UBERON:0007284,3.91e-21,64;UBERON:0000955,7.02e-21,47;UBERON:0006238,7.02e-21,47;UBERON:0002616,4.69e-20,46;UBERON:0003080,2.70e-19,40;UBERON:0002780,3.02e-18,39;UBERON:0001890,3.02e-18,39;UBERON:0006240,3.02e-18,39;UBERON:0004121,6.89e-18,95;UBERON:0000924,6.89e-18,95;UBERON:0006601,6.89e-18,95;UBERON:0010371,3.94e-17,73;UBERON:0003056,2.23e-15,49;UBERON:0002021,7.31e-15,10;UBERON:0000411,7.31e-15,10;UBERON:0001950,7.31e-15,10;UBERON:0000956,9.69e-14,21;UBERON:0001869,9.69e-14,21;UBERON:0000203,9.69e-14,21;UBERON:0002619,2.99e-12,17;UBERON:0010314,3.91e-12,92;UBERON:0000025,1.90e-11,114;UBERON:0002420,7.89e-11,8;UBERON:0007245,7.89e-11,8;UBERON:0010009,7.89e-11,8;UBERON:0010011,7.89e-11,8;UBERON:0000454,7.89e-11,8;UBERON:0004111,6.40e-10,122;UBERON:0002240,4.44e-09,6;UBERON:0005174,4.44e-09,6;UBERON:0001137,4.44e-09,6;UBERON:0003076,2.60e-08,12;UBERON:0003057,2.60e-08,12;UBERON:0001948,8.31e-08,5;UBERON:0002315,8.31e-08,5;UBERON:0000369,4.68e-07,5;UBERON:0002435,4.68e-07,5;UBERON:0000204,4.68e-07,5;UBERON:0010082,4.68e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.67644320836673,3.1739458756322,1.90149421051854,0,0,0,0,0,0,0,1.24427534770173,0.675029691658453,1.47227472945967,7.7125765789027,4.41737081903227,1.5923803897944,0.958454710182364,0,31.9336054898227,31.7941471832117,44.5458946443106,5.53922408466814,10.6125666578795,11.9810075228055,9.21303896704557,11.2552522006336,34.9907987408895,65.4075459751542,39.1522122197533,9.50637173709033,0,0,0.869593466105033,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0.230615497256059,0.301445281105245,0.705532242814229,0,0.247194967734374,0,0,0.161766849947409,0.662524555381181,0,0,0.878342391034642,1.04723353406728,0,0,0,0,7.04016005202667,3.20250421973039,5.15182843662744,2.78118912307642,5.11430914660661,5.40248915854856,4.38051410282946,0.101839363850316,0,0,0.841767423545896,0,0,0.360124259610698,0.452114453507145,0.748401490664606,1.40925092313335,0.562210347358373,0.776110112217047,0,0,0.175951124163949,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0.703578179943289,0,0,0.196764231747404,0.462801338662135,0.465067889500816,0,0.817357396570186,0.658239399653922,1.31333971263276,0.405344047729279,0.146199987425332,0,0,1.26173969138476,3.80747065803352,0,0,0,0.464473343720877,0,0,0,0,0,0,1.25667604400135,0.596869416123452,0.38992817423824,0,0,0,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.631222379012867,0.316182685621286,0.147610147979602,0,0,0.296452627087149,0,0,0,0,0,0,0,1.45921704097532,0.549122826376163,20.1275489138296,1.48856379067401,0.312037673114561,0,0.179397413521912,0.482443521363367,0,0,0,0.169745085775188,0.469380496577004,0.335012514883631,0.238043640886014,2.34160377429359,0.945810864637146,3.5434350343804,1.75400245523236,0.327726629431476,0.172684981865896,0.144649058581512,0,0,0,0,7.06422595946285,6.91548950893999,0,0.252470927204373,0,0,0.215423397732799,0,0,0.566153061577665,0,0,0,1.60660658210904,0,0.178065603667255,0.325773918707152,0,0,0,0,0,0,0.614870295887855,0,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0.680879211507576,0,0.129358683782755,0,0.354680467284547,0,0.329098041204242,0.304464949114599,0.704015124191131,0,0,0,0.161464426695906,0.482503399425247,0.119372344003136,0.492422699235184,0,20.025932617135,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0,0.134864346384821,0.41326727862668,0,0.129614973291793,0,0,0,0,0.194451188344048,0,0,0,0.13020438484395,0,0,0.288030006257865,0,0,0,0,0,0,0.120195449519969,0,0.201932899896295,0,0,0,0,0.116876902181569,0,0,0,0.335769232728157,0,0,0.183151624267265,0,0,42.35638819628,33.6037422650239,32.0821487526062,24.9187114398347,13.0165678756422,32.4819375877571,15.5255175053315,17.1122057225204,28.5479717660049,31.0656187051092,0,0.399024873401031,1.19513524027894,4.132814190161,0.209613162627982,0.735374033800057,0.666740183404846,0.618105171716683,0.962757628775446,2.02157769411038,0.25347929989024,0.943131706930381,1.21733959710847,1.21647789569252,0.976402972245426,0.952587382566147,1.27472758539341,0.578727661391115,0.824171801606613,0.883193520806384,2.05721551431249,3.54951612318675,0.715308569841963,0.581385666529314,1.03520318456864,1.09998990259179,2.19513567447327,2.10455769150274,1.62964936615034,0.561142271657738,1.18635018124174,2.56111654176465,0.818462086339379,0.464810523557898,1.35034627686799,3.49734809113124,1.16965804222704,1.71896843238639,0.191288332068843,1.32354851471709,0|short_description=p2@uc009bfw.1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=145 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=11bp_to_uc009bfw.1_5end | |||
|cluster_id=chr6:30754795..30754817,+ | |||
|description=CAGE_peak_2_at_uc009bfw.1_5end | |||
|id=chr6:30754795..30754817,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.06e-13!23;CL:0000337!1.06e-13!23;CL:0000540!9.56e-08!33;CL:0000047!9.56e-08!33;CL:0000031!9.56e-08!33;CL:0000404!9.56e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.92e-20,23;CL:0000337,1.92e-20,23;CL:0000540,2.35e-12,33;CL:0000047,2.35e-12,33;CL:0000031,2.35e-12,33;CL:0000404,2.35e-12,33;CL:0000393,1.50e-09,39;CL:0000211,1.50e-09,39;CL:0002319,3.87e-08,43;CL:0000221,7.89e-08,44;CL:0000133,7.89e-08,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.21e-18!52;UBERON:0005068!1.21e-18!52;UBERON:0006241!1.21e-18!52;UBERON:0007135!1.21e-18!52;UBERON:0002020!5.58e-18!34;UBERON:0000955!3.55e-17!50;UBERON:0006238!3.55e-17!50;UBERON:0002616!1.14e-16!49;UBERON:0002346!5.12e-16!71;UBERON:0003075!5.12e-16!71;UBERON:0007284!5.12e-16!71;UBERON:0000033!8.04e-16!63;UBERON:0001017!1.10e-15!73;UBERON:0005743!1.10e-15!73;UBERON:0000073!1.20e-14!75;UBERON:0001016!1.20e-14!75;UBERON:0003056!2.02e-14!49;UBERON:0002791!2.45e-14!29;UBERON:0003528!2.45e-14!29;UBERON:0001893!2.45e-14!29;UBERON:0003080!6.54e-14!40;UBERON:0002780!2.76e-13!39;UBERON:0001890!2.76e-13!39;UBERON:0006240!2.76e-13!39;UBERON:0004121!5.35e-13!102;UBERON:0000924!5.35e-13!102;UBERON:0006601!5.35e-13!102;UBERON:0000025!1.61e-10!114;UBERON:0000956!4.03e-09!21;UBERON:0001869!4.03e-09!21;UBERON:0000203!4.03e-09!21;UBERON:0002021!5.26e-09!10;UBERON:0000411!5.26e-09!10;UBERON:0001950!5.26e-09!10;UBERON:0004111!1.50e-08!122;UBERON:0002619!1.55e-07!17;UBERON:0007811!1.90e-07!86;UBERON:0002420!9.69e-07!8;UBERON:0007245!9.69e-07!8;UBERON:0010009!9.69e-07!8;UBERON:0010011!9.69e-07!8;UBERON:0000454!9.69e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.18e-30,54;UBERON:0002020,2.33e-29,34;UBERON:0001049,4.36e-27,52;UBERON:0005068,4.36e-27,52;UBERON:0006241,4.36e-27,52;UBERON:0007135,4.36e-27,52;UBERON:0001017,6.53e-26,73;UBERON:0001016,7.21e-25,75;UBERON:0003528,6.57e-23,29;UBERON:0002791,6.57e-23,29;UBERON:0001893,6.57e-23,29;UBERON:0002346,3.91e-21,64;UBERON:0003075,3.91e-21,64;UBERON:0007284,3.91e-21,64;UBERON:0000955,7.02e-21,47;UBERON:0006238,7.02e-21,47;UBERON:0002616,4.69e-20,46;UBERON:0003080,2.70e-19,40;UBERON:0002780,3.02e-18,39;UBERON:0001890,3.02e-18,39;UBERON:0006240,3.02e-18,39;UBERON:0004121,6.89e-18,95;UBERON:0000924,6.89e-18,95;UBERON:0006601,6.89e-18,95;UBERON:0010371,3.94e-17,73;UBERON:0003056,2.23e-15,49;UBERON:0002021,7.31e-15,10;UBERON:0000411,7.31e-15,10;UBERON:0001950,7.31e-15,10;UBERON:0000956,9.69e-14,21;UBERON:0001869,9.69e-14,21;UBERON:0000203,9.69e-14,21;UBERON:0002619,2.99e-12,17;UBERON:0010314,3.91e-12,92;UBERON:0000025,1.90e-11,114;UBERON:0002420,7.89e-11,8;UBERON:0007245,7.89e-11,8;UBERON:0010009,7.89e-11,8;UBERON:0010011,7.89e-11,8;UBERON:0000454,7.89e-11,8;UBERON:0004111,6.40e-10,122;UBERON:0002240,4.44e-09,6;UBERON:0005174,4.44e-09,6;UBERON:0001137,4.44e-09,6;UBERON:0003076,2.60e-08,12;UBERON:0003057,2.60e-08,12;UBERON:0001948,8.31e-08,5;UBERON:0002315,8.31e-08,5;UBERON:0000369,4.68e-07,5;UBERON:0002435,4.68e-07,5;UBERON:0000204,4.68e-07,5;UBERON:0010082,4.68e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.67644320836673,3.1739458756322,1.90149421051854,0,0,0,0,0,0,0,1.24427534770173,0.675029691658453,1.47227472945967,7.7125765789027,4.41737081903227,1.5923803897944,0.958454710182364,0,31.9336054898227,31.7941471832117,44.5458946443106,5.53922408466814,10.6125666578795,11.9810075228055,9.21303896704557,11.2552522006336,34.9907987408895,65.4075459751542,39.1522122197533,9.50637173709033,0,0,0.869593466105033,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0.230615497256059,0.301445281105245,0.705532242814229,0,0.247194967734374,0,0,0.161766849947409,0.662524555381181,0,0,0.878342391034642,1.04723353406728,0,0,0,0,7.04016005202667,3.20250421973039,5.15182843662744,2.78118912307642,5.11430914660661,5.40248915854856,4.38051410282946,0.101839363850316,0,0,0.841767423545896,0,0,0.360124259610698,0.452114453507145,0.748401490664606,1.40925092313335,0.562210347358373,0.776110112217047,0,0,0.175951124163949,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0.703578179943289,0,0,0.196764231747404,0.462801338662135,0.465067889500816,0,0.817357396570186,0.658239399653922,1.31333971263276,0.405344047729279,0.146199987425332,0,0,1.26173969138476,3.80747065803352,0,0,0,0.464473343720877,0,0,0,0,0,0,1.25667604400135,0.596869416123452,0.38992817423824,0,0,0,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.631222379012867,0.316182685621286,0.147610147979602,0,0,0.296452627087149,0,0,0,0,0,0,0,1.45921704097532,0.549122826376163,20.1275489138296,1.48856379067401,0.312037673114561,0,0.179397413521912,0.482443521363367,0,0,0,0.169745085775188,0.469380496577004,0.335012514883631,0.238043640886014,2.34160377429359,0.945810864637146,3.5434350343804,1.75400245523236,0.327726629431476,0.172684981865896,0.144649058581512,0,0,0,0,7.06422595946285,6.91548950893999,0,0.252470927204373,0,0,0.215423397732799,0,0,0.566153061577665,0,0,0,1.60660658210904,0,0.178065603667255,0.325773918707152,0,0,0,0,0,0,0.614870295887855,0,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0.680879211507576,0,0.129358683782755,0,0.354680467284547,0,0.329098041204242,0.304464949114599,0.704015124191131,0,0,0,0.161464426695906,0.482503399425247,0.119372344003136,0.492422699235184,0,20.025932617135,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0,0.134864346384821,0.41326727862668,0,0.129614973291793,0,0,0,0,0.194451188344048,0,0,0,0.13020438484395,0,0,0.288030006257865,0,0,0,0,0,0,0.120195449519969,0,0.201932899896295,0,0,0,0,0.116876902181569,0,0,0,0.335769232728157,0,0,0.183151624267265,0,0,42.35638819628,33.6037422650239,32.0821487526062,24.9187114398347,13.0165678756422,32.4819375877571,15.5255175053315,17.1122057225204,28.5479717660049,31.0656187051092,0,0.399024873401031,1.19513524027894,4.132814190161,0.209613162627982,0.735374033800057,0.666740183404846,0.618105171716683,0.962757628775446,2.02157769411038,0.25347929989024,0.943131706930381,1.21733959710847,1.21647789569252,0.976402972245426,0.952587382566147,1.27472758539341,0.578727661391115,0.824171801606613,0.883193520806384,2.05721551431249,3.54951612318675,0.715308569841963,0.581385666529314,1.03520318456864,1.09998990259179,2.19513567447327,2.10455769150274,1.62964936615034,0.561142271657738,1.18635018124174,2.56111654176465,0.818462086339379,0.464810523557898,1.35034627686799,3.49734809113124,1.16965804222704,1.71896843238639,0.191288332068843,1.32354851471709,0 | |||
|short_description=p2@uc009bfw.1 | |||
}} |
Latest revision as of 13:47, 5 August 2015
Short description: | p2@uc009bfw.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_uc009bfw.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:145 |
Association with transcript: | 11bp_to_uc009bfw.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.92e-20 | 23 |
neuroblast (sensu Vertebrata) | 1.92e-20 | 23 |
neuron | 2.35e-12 | 33 |
neuronal stem cell | 2.35e-12 | 33 |
neuroblast | 2.35e-12 | 33 |
electrically signaling cell | 2.35e-12 | 33 |
electrically responsive cell | 1.50e-09 | 39 |
electrically active cell | 1.50e-09 | 39 |
neural cell | 3.87e-08 | 43 |
ectodermal cell | 7.89e-08 | 44 |
neurectodermal cell | 7.89e-08 | 44 |