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FFCP PHASE1:Mm9::chr11:101888192..101888216,-: Difference between revisions

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(Created page with "{{FFCP |id=chr11:101888192..101888216,- |short_description=p2@Mpp3 |description=CAGE_peak_2_at_Mpp3_5end |association_with_transcript=2bp_to_ENSMUST00000169970_5end |Entr...")
 
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{{FFCP
{{FFCP
|id=chr11:101888192..101888216,-
|DHSsupport=NA
|short_description=p2@Mpp3
|DPIdataset=NA
|description=CAGE_peak_2_at_Mpp3_5end
|association_with_transcript=2bp_to_ENSMUST00000169970_5end
|EntrezGene=13384
|EntrezGene=13384
|HGNC=
|HGNC=
|MCL_coexpression_id=30
|TSSclassifier=NA
|UniProt=O88910
|UniProt=O88910
|association_with_transcript=2bp_to_ENSMUST00000169970_5end
|cluster_id=chr11:101888192..101888216,-
|description=CAGE_peak_2_at_Mpp3_5end
|id=chr11:101888192..101888216,-
|ontology_enrichment_celltype=CL:0000117!5.02e-09!23;CL:0000337!5.02e-09!23
|ontology_enrichment_celltype_v019_2=CL:0000117,5.11e-12,23;CL:0000337,5.11e-12,23;CL:0000540,1.60e-08,33;CL:0000047,1.60e-08,33;CL:0000031,1.60e-08,33;CL:0000404,1.60e-08,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!2.07e-18!71;UBERON:0003075!2.07e-18!71;UBERON:0007284!2.07e-18!71;UBERON:0001049!6.28e-15!52;UBERON:0005068!6.28e-15!52;UBERON:0006241!6.28e-15!52;UBERON:0007135!6.28e-15!52;UBERON:0000033!7.56e-14!63;UBERON:0000955!1.74e-13!50;UBERON:0006238!1.74e-13!50;UBERON:0002020!1.82e-13!34;UBERON:0003056!1.99e-13!49;UBERON:0004121!3.54e-13!102;UBERON:0000924!3.54e-13!102;UBERON:0006601!3.54e-13!102;UBERON:0002616!7.63e-13!49;UBERON:0001017!1.06e-12!73;UBERON:0005743!1.06e-12!73;UBERON:0003080!5.48e-12!40;UBERON:0002791!8.37e-12!29;UBERON:0003528!8.37e-12!29;UBERON:0001893!8.37e-12!29;UBERON:0000073!8.90e-12!75;UBERON:0001016!8.90e-12!75;UBERON:0002780!1.08e-11!39;UBERON:0001890!1.08e-11!39;UBERON:0006240!1.08e-11!39;UBERON:0000956!1.50e-07!21;UBERON:0001869!1.50e-07!21;UBERON:0000203!1.50e-07!21;UBERON:0000468!5.75e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0002346,4.59e-19,64;UBERON:0003075,4.59e-19,64;UBERON:0007284,4.59e-19,64;UBERON:0001049,1.23e-17,52;UBERON:0005068,1.23e-17,52;UBERON:0006241,1.23e-17,52;UBERON:0007135,1.23e-17,52;UBERON:0000073,1.34e-17,54;UBERON:0002020,1.39e-17,34;UBERON:0001017,6.70e-16,73;UBERON:0000955,7.37e-16,47;UBERON:0006238,7.37e-16,47;UBERON:0003528,2.38e-15,29;UBERON:0002791,2.38e-15,29;UBERON:0001893,2.38e-15,29;UBERON:0010371,3.75e-15,73;UBERON:0002616,5.11e-15,46;UBERON:0001016,5.42e-15,75;UBERON:0003056,9.48e-15,49;UBERON:0003080,1.78e-13,40;UBERON:0002780,4.36e-13,39;UBERON:0001890,4.36e-13,39;UBERON:0006240,4.36e-13,39;UBERON:0004121,4.69e-13,95;UBERON:0000924,4.69e-13,95;UBERON:0006601,4.69e-13,95;UBERON:0010314,1.55e-12,92;UBERON:0000956,1.22e-09,21;UBERON:0001869,1.22e-09,21;UBERON:0000203,1.22e-09,21;UBERON:0002619,2.12e-08,17;UBERON:0002420,2.93e-07,8;UBERON:0007245,2.93e-07,8;UBERON:0010009,2.93e-07,8;UBERON:0010011,2.93e-07,8;UBERON:0000454,2.93e-07,8
|phase1_expression=0.480446541314382,0.348975407639361,2.27499619694768,0,0,0.16787927191189,0.467225281191051,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,2.55129870453209,0,0,0.639969691173627,0.22940928106717,1.14846392823004,0,0.215471232685889,0,0,0.443461021310609,0,0,0,0.577703239502549,0.498703936075477,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0.515672092277442,3.64169629547276,1.5869729378161,3.1691570175309,0,0,0,0,0,0,0.384218305321555,1.03689612308478,1.21505344498522,1.26194976810829,1.14260393761521,3.3130281142742,2.69479758272899,3.54628242767475,5.51531271966013,0,1.78762273319263,1.99688493233117,2.76961204233407,4.11694396210843,1.56274011167028,5.30447698102624,3.37657566019008,4.12555268997387,1.47314292736834,2.27794689278565,2.23679334990361,0.075726193333184,0,0.579728977403356,0,0,0,0,0,1.12355536105401,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,3.26572705942614,0.867426633830679,1.52232739156071,1.38369298353635,1.3565037649736,2.93971767839262,1.38233250462643,0.247194967734374,0.86759614151947,0,2.91180329905337,1.54589062922275,0.484875253135222,0,31.9131068742586,36.8626203991681,0,0,0,0,1.64769703345305,2.74500361691176,4.39790232395025,5.21472960576829,4.09144731728529,0.83115217823824,2.75810147215188,0.916554274652847,1.11966273549084,2.0217820674694,0.420883711772948,1.17108398666433,0.459804208866946,1.80062129805349,1.50704817835715,1.7009124787832,1.7935920839879,2.52994656311268,1.03481348295606,0.646703978798527,0.378212160335639,1.23165786914764,1.31517439456545,0.278047249225598,1.0447564995665,0,0.199034266818493,0,0,0,0.207125772535502,0.469052119962192,0.900310307305074,0.473489471170421,0.590292695242212,0.154267112887378,0.697601834251224,0.804820204198858,0.934122738937356,0.493679549740441,0.492502392237286,1.13496333364198,0.292399974850665,0.219550115291051,0.536825675041487,5.25724871410318,2.36680608472354,0,0,1.49301775374664,0.928946687441754,1.03093969057675,0.605050573870028,0,0.570676878337677,0,0.658795818896044,1.75934646160189,0.994782360205754,1.36474860983384,0,0,0.398282546508734,0.758671603812327,0.799739588268102,1.1270773567308,0.814605311381257,0.387904974335251,0.771494018793504,0.442655759869801,0.295220295959204,0.31399745568275,0.246794327843601,0,0.333690211432188,0,0.224862112384854,0.202860121388503,0,0.25462585178142,0,1.45921704097532,0.274561413188081,0,0,0.312037673114561,0,0,0,0.369506380333209,0.568474235311454,0.325929952884052,0.339490171550376,0.234690248288502,0,0,0.585400943573396,0.315270288212382,0.44292937929755,0.478364305972461,0.655453258862952,0.518054945597687,0.433947175744535,0,0,0,0,2.24770825982909,2.69586879162067,0,4.29200576247434,0,1.17131623288992,1.50796378412959,0,0,0,0.809621403349789,0.584511715822624,2.76701444562566,8.03303291054518,0.709700426041343,0.534196811001766,0.162886959353576,0.329940245945071,0,0.485561272309963,0,0.377210159511796,0,0.922305443831782,1.29214146584111,0,0.356497378384721,0,0,0,1.02131881726136,0.540183282093931,0,1.07168517515796,0.709360934569094,0.891844088010353,1.15184314421485,2.13125464380219,0.469343416127421,0,0,0.16488625294148,1.13025098687134,0.482503399425247,0.477489376012546,0.328281799490123,0.874442509889552,1.48340241608408,0.341741761595705,0.206386867963223,0.555583582109135,0.188368457004691,0,0.915112692826091,0,0.279902904647316,0,1.90934123603023,1.26534397432454,0.406638934253697,0.216010681643603,0.418176592028937,0.436725127492355,0.134864346384821,1.07449492442937,1.04702376793612,1.42576470620972,0.621339313086926,0,0.747582730219894,1.15820943319968,1.55560950675238,0.516639293910924,1.01373675294467,1.87771581833206,2.3436789271911,4.19437377702843,2.65742532908607,0.864090018773596,0,0.202725215290164,0.102710957164827,0.389762468933385,0,0.198681354781265,0,0,0,0.0762068066549998,0,0,0,0,0,0.443971906748129,0.0897138566094757,0,0,0.375364950902364,0.183151624267265,0,1.50471631210609,2.25900737046827,0.920650473014354,2.86447756719698,1.54667864109319,3.42541259885321,4.5323633843382,6.75022500231806,4.95353323546643,1.81256963593682,6.73088405277366,0.415149390336707,1.19707462020309,0.853668028770671,1.21553358534147,0.209613162627982,0.183843508450014,0.44449345560323,2.67845574410562,0.64183841918363,2.27427490587418,1.52087579934144,2.64076877940507,2.43467919421694,2.04880487695582,1.89537047553524,1.90517476513229,2.54945517078682,3.08654752741928,2.88460130562315,2.79677948255355,2.40008476669791,1.77475806159337,2.38436189947321,1.59881058295561,2.25862512996793,1.18460451048347,2.0122077016005,2.36762740294059,1.49384525230448,3.36685362994643,2.84724043498018,1.0835493061312,2.86461730218783,3.56354734727722,1.54325288784913,2.49810577937946,2.33931608445408,1.07435527024149,1.91288332068843,0.661774257358546,3.01428186306548
|phase1_expression=0.480446541314382,0.348975407639361,2.27499619694768,0,0,0.16787927191189,0.467225281191051,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,2.55129870453209,0,0,0.639969691173627,0.22940928106717,1.14846392823004,0,0.215471232685889,0,0,0.443461021310609,0,0,0,0.577703239502549,0.498703936075477,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0.515672092277442,3.64169629547276,1.5869729378161,3.1691570175309,0,0,0,0,0,0,0.384218305321555,1.03689612308478,1.21505344498522,1.26194976810829,1.14260393761521,3.3130281142742,2.69479758272899,3.54628242767475,5.51531271966013,0,1.78762273319263,1.99688493233117,2.76961204233407,4.11694396210843,1.56274011167028,5.30447698102624,3.37657566019008,4.12555268997387,1.47314292736834,2.27794689278565,2.23679334990361,0.075726193333184,0,0.579728977403356,0,0,0,0,0,1.12355536105401,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,3.26572705942614,0.867426633830679,1.52232739156071,1.38369298353635,1.3565037649736,2.93971767839262,1.38233250462643,0.247194967734374,0.86759614151947,0,2.91180329905337,1.54589062922275,0.484875253135222,0,31.9131068742586,36.8626203991681,0,0,0,0,1.64769703345305,2.74500361691176,4.39790232395025,5.21472960576829,4.09144731728529,0.83115217823824,2.75810147215188,0.916554274652847,1.11966273549084,2.0217820674694,0.420883711772948,1.17108398666433,0.459804208866946,1.80062129805349,1.50704817835715,1.7009124787832,1.7935920839879,2.52994656311268,1.03481348295606,0.646703978798527,0.378212160335639,1.23165786914764,1.31517439456545,0.278047249225598,1.0447564995665,0,0.199034266818493,0,0,0,0.207125772535502,0.469052119962192,0.900310307305074,0.473489471170421,0.590292695242212,0.154267112887378,0.697601834251224,0.804820204198858,0.934122738937356,0.493679549740441,0.492502392237286,1.13496333364198,0.292399974850665,0.219550115291051,0.536825675041487,5.25724871410318,2.36680608472354,0,0,1.49301775374664,0.928946687441754,1.03093969057675,0.605050573870028,0,0.570676878337677,0,0.658795818896044,1.75934646160189,0.994782360205754,1.36474860983384,0,0,0.398282546508734,0.758671603812327,0.799739588268102,1.1270773567308,0.814605311381257,0.387904974335251,0.771494018793504,0.442655759869801,0.295220295959204,0.31399745568275,0.246794327843601,0,0.333690211432188,0,0.224862112384854,0.202860121388503,0,0.25462585178142,0,1.45921704097532,0.274561413188081,0,0,0.312037673114561,0,0,0,0.369506380333209,0.568474235311454,0.325929952884052,0.339490171550376,0.234690248288502,0,0,0.585400943573396,0.315270288212382,0.44292937929755,0.478364305972461,0.655453258862952,0.518054945597687,0.433947175744535,0,0,0,0,2.24770825982909,2.69586879162067,0,4.29200576247434,0,1.17131623288992,1.50796378412959,0,0,0,0.809621403349789,0.584511715822624,2.76701444562566,8.03303291054518,0.709700426041343,0.534196811001766,0.162886959353576,0.329940245945071,0,0.485561272309963,0,0.377210159511796,0,0.922305443831782,1.29214146584111,0,0.356497378384721,0,0,0,1.02131881726136,0.540183282093931,0,1.07168517515796,0.709360934569094,0.891844088010353,1.15184314421485,2.13125464380219,0.469343416127421,0,0,0.16488625294148,1.13025098687134,0.482503399425247,0.477489376012546,0.328281799490123,0.874442509889552,1.48340241608408,0.341741761595705,0.206386867963223,0.555583582109135,0.188368457004691,0,0.915112692826091,0,0.279902904647316,0,1.90934123603023,1.26534397432454,0.406638934253697,0.216010681643603,0.418176592028937,0.436725127492355,0.134864346384821,1.07449492442937,1.04702376793612,1.42576470620972,0.621339313086926,0,0.747582730219894,1.15820943319968,1.55560950675238,0.516639293910924,1.01373675294467,1.87771581833206,2.3436789271911,4.19437377702843,2.65742532908607,0.864090018773596,0,0.202725215290164,0.102710957164827,0.389762468933385,0,0.198681354781265,0,0,0,0.0762068066549998,0,0,0,0,0,0.443971906748129,0.0897138566094757,0,0,0.375364950902364,0.183151624267265,0,1.50471631210609,2.25900737046827,0.920650473014354,2.86447756719698,1.54667864109319,3.42541259885321,4.5323633843382,6.75022500231806,4.95353323546643,1.81256963593682,6.73088405277366,0.415149390336707,1.19707462020309,0.853668028770671,1.21553358534147,0.209613162627982,0.183843508450014,0.44449345560323,2.67845574410562,0.64183841918363,2.27427490587418,1.52087579934144,2.64076877940507,2.43467919421694,2.04880487695582,1.89537047553524,1.90517476513229,2.54945517078682,3.08654752741928,2.88460130562315,2.79677948255355,2.40008476669791,1.77475806159337,2.38436189947321,1.59881058295561,2.25862512996793,1.18460451048347,2.0122077016005,2.36762740294059,1.49384525230448,3.36685362994643,2.84724043498018,1.0835493061312,2.86461730218783,3.56354734727722,1.54325288784913,2.49810577937946,2.33931608445408,1.07435527024149,1.91288332068843,0.661774257358546,3.01428186306548
|short_description=p2@Mpp3
}}
}}

Latest revision as of 17:50, 26 September 2015

Short description:p2@Mpp3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Mpp3_5end
Coexpression cluster:MCL_coexpression_mm9:30
Association with transcript: 2bp_to_ENSMUST00000169970_5end
EntrezGene:Mpp3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Mpp3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.27
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.55
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C33.64
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.04
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.22
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.31
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.69
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.55
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.79
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.77
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.12
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.30
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.13
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.24
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D73.27
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I11.38
adrenal gland, embryo E18.CNhs11026.1262-18F51.36
adrenal gland, neonate N00.CNhs11191.1311-23C12.94
adrenal gland, neonate N25.CNhs11223.1377-27I31.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.87
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F52.91
bone (os femoris), neonate N16.CNhs11225.1525-43A61.55
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B231.91
cerebellum, neonate N30.CNhs11135.1395-42I236.86
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.65
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F14.40
cortex, adult.CNhs10473.12-14D55.21
cortex, neonate N30.CNhs11107.1392-42F24.09
diencephalon, adult.CNhs10482.20-12F20.83
diencephalon, neonate N30.CNhs11201.1388-42B22.76
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.92
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.12
epididymis, adult.CNhs10490.58-23B22.02
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C61.17
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C91.80
eyeball, embryo E17.CNhs11023.1261-18D41.51
eyeball, neonate N00.CNhs11207.633-15C61.70
eyeball, neonate N01.CNhs11140.1532-43E71.79
eyeball, neonate N02.CNhs11205.1551-44G82.53
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E21.23
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.93
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G11.13
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E85.26
hippocampus, neonate N00.CNhs11228.627-43G12.37
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.49
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D81.03
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B81.76
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A51.36
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.77
kidney, neonate N10.CNhs11206.758-6D50.44
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F41.46
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.25
medulla oblongata, neonate N30.CNhs11200.1396-42A32.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C24.29
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.77
olfactory brain, adult.CNhs10489.18-22I98.03
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H30.48
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C91.48
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E31.27
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A91.07
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I11.43
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G51.56
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B71.88
testis, neonate N07.CNhs11222.726-26I42.34
testis, neonate N10.CNhs11204.763-44D94.19
testis, neonate N20.CNhs11110.839-18H32.66
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.55
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.95
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.73
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.68
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.43
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.55
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.80
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.26
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.85
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.08
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.56
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I52.50
whole body, embryo E18.CNhs10516.493-3B32.34
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C61.91
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B43.01





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)5.11e-1223
neuroblast (sensu Vertebrata)5.11e-1223
neuron1.60e-0833
neuronal stem cell1.60e-0833
neuroblast1.60e-0833
electrically signaling cell1.60e-0833

Uber anatomy
Ontology termp-valuen
neurectoderm4.59e-1964
neural plate4.59e-1964
presumptive neural plate4.59e-1964
neural tube1.23e-1752
neural rod1.23e-1752
future spinal cord1.23e-1752
neural keel1.23e-1752
regional part of nervous system1.34e-1754
gray matter1.39e-1734
central nervous system6.70e-1673
brain7.37e-1647
future brain7.37e-1647
brain grey matter2.38e-1529
regional part of telencephalon2.38e-1529
telencephalon2.38e-1529
ecto-epithelium3.75e-1573
regional part of brain5.11e-1546
nervous system5.42e-1575
pre-chordal neural plate9.48e-1549
anterior neural tube1.78e-1340
regional part of forebrain4.36e-1339
forebrain4.36e-1339
future forebrain4.36e-1339
ectoderm-derived structure4.69e-1395
ectoderm4.69e-1395
presumptive ectoderm4.69e-1395
structure with developmental contribution from neural crest1.55e-1292
cerebral cortex1.22e-0921
cerebral hemisphere1.22e-0921
pallium1.22e-0921
regional part of cerebral cortex2.12e-0817
basal ganglion2.93e-078
nuclear complex of neuraxis2.93e-078
aggregate regional part of brain2.93e-078
collection of basal ganglia2.93e-078
cerebral subcortex2.93e-078
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