FFCP PHASE1:Mm9::chr6:72908428..72908440,-: Difference between revisions
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{{FFCP|EntrezGene=19240|HGNC=|MCL_coexpression_id=0|UniProt=|association_with_transcript=-35bp_to_ENSMUST00000144337_5end|description=CAGE_peak_4_at_Tmsb10_5end|id=chr6:72908428..72908440,-|ontology_enrichment_celltype=CL:0000117!2.40e-12!23;CL:0000337!2.40e-12!23;CL:0000221!1.75e-11!44;CL:0000133!1.75e-11!44;CL:0002319!2.00e-11!43;CL:0000055!4.39e-11!50;CL:0000393!3.04e-08!39;CL:0000211!3.04e-08!39;CL:0000540!9.31e-08!33;CL:0000047!9.31e-08!33;CL:0000031!9.31e-08!33;CL:0000404!9.31e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,4.43e-16,23;CL:0000337,4.43e-16,23;CL:0002319,1.30e-13,43;CL:0000221,4.70e-13,44;CL:0000133,4.70e-13,44;CL:0000393,2.87e-09,39;CL:0000211,2.87e-09,39;CL:0000540,7.57e-09,33;CL:0000047,7.57e-09,33;CL:0000031,7.57e-09,33;CL:0000404,7.57e-09,33;CL:0002321,4.53e-07,70;CL:0002453,6.06e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.08e-20!75;UBERON:0001016!2.08e-20!75;UBERON:0001017!3.84e-20!73;UBERON:0005743!3.84e-20!73;UBERON:0001049!3.58e-18!52;UBERON:0005068!3.58e-18!52;UBERON:0006241!3.58e-18!52;UBERON:0007135!3.58e-18!52;UBERON:0000955!4.62e-17!50;UBERON:0006238!4.62e-17!50;UBERON:0002616!1.28e-16!49;UBERON:0000033!4.76e-15!63;UBERON:0002020!9.22e-15!34;UBERON:0004121!1.14e-14!102;UBERON:0000924!1.14e-14!102;UBERON:0006601!1.14e-14!102;UBERON:0002346!2.09e-14!71;UBERON:0003075!2.09e-14!71;UBERON:0007284!2.09e-14!71;UBERON:0003080!2.41e-12!40;UBERON:0003056!4.69e-12!49;UBERON:0002780!7.55e-12!39;UBERON:0001890!7.55e-12!39;UBERON:0006240!7.55e-12!39;UBERON:0002791!8.84e-12!29;UBERON:0003528!8.84e-12!29;UBERON:0001893!8.84e-12!29;UBERON:0000956!1.31e-07!21;UBERON:0001869!1.31e-07!21;UBERON:0000203!1.31e-07!21;UBERON:0002619!3.22e-07!17;UBERON:0003076!7.59e-07!12;UBERON:0003057!7.59e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.17e-24,73;UBERON:0000073,4.48e-24,54;UBERON:0001016,5.96e-24,75;UBERON:0001049,7.28e-22,52;UBERON:0005068,7.28e-22,52;UBERON:0006241,7.28e-22,52;UBERON:0007135,7.28e-22,52;UBERON:0002020,5.81e-19,34;UBERON:0002346,2.53e-18,64;UBERON:0003075,2.53e-18,64;UBERON:0007284,2.53e-18,64;UBERON:0004121,7.92e-18,95;UBERON:0000924,7.92e-18,95;UBERON:0006601,7.92e-18,95;UBERON:0000955,1.46e-17,47;UBERON:0006238,1.46e-17,47;UBERON:0002616,6.04e-17,46;UBERON:0010314,1.11e-15,92;UBERON:0003528,1.45e-14,29;UBERON:0002791,1.45e-14,29;UBERON:0001893,1.45e-14,29;UBERON:0003080,2.93e-14,40;UBERON:0010371,3.75e-14,73;UBERON:0002780,1.49e-13,39;UBERON:0001890,1.49e-13,39;UBERON:0006240,1.49e-13,39;UBERON:0003056,8.97e-13,49;UBERON:0002619,2.55e-09,17;UBERON:0000025,6.18e-09,114;UBERON:0003076,1.23e-08,12;UBERON:0003057,1.23e-08,12;UBERON:0000956,1.63e-08,21;UBERON:0001869,1.63e-08,21;UBERON:0000203,1.63e-08,21;UBERON:0002420,6.87e-08,8;UBERON:0007245,6.87e-08,8;UBERON:0010009,6.87e-08,8;UBERON:0010011,6.87e-08,8;UBERON:0000454,6.87e-08,8;UBERON:0004111,2.38e-07,122|phase1_expression=0.320297694209588,0.697950815278722,0.454999239389536,0,0,1.17515490338323,0.233612640595526,0.258246646883153,0.140788722151667,0.234064526321993,0,0.0797721589953364,0,0.0874204024189974,0,0.202475267389826,0,0.315462165358238,0,0.42438965179803,18.28430738248,0.198581902401771,0,0.319984845586813,0,0,0.430761996159075,0.430942465371778,0.760093677825496,0.504060259519861,0.665191531965914,0.635030673459631,0,0,0.577703239502549,0.664938581433969,0.612508068787107,1.67412652294763,1.5626706890476,1.0470474879476,2.94115744015507,0,2.91306211818692,0.251793635951155,0.811015449756117,1.10128051297009,3.12956537739216,3.92445281484804,2.63623419281366,3.88859798148567,1.53985063787899,1.43752564364972,0.335565212115473,0,0,1.02903774414379,1.14613375975503,1.54701627683233,3.43937983461316,4.23192783417626,6.33831403506179,1.35537812827653,0.889294796111139,2.2497492932035,0.988866362566974,2.1314403448383,1.79760066311043,3.84218305321555,0.829516898467821,0.810035629990144,1.05162480675691,5.71301968807607,6.18431914664518,1.46988959057945,1.53352753629178,2.75765635983006,5.50579404996943,5.74593021383345,4.6081959976873,1.58263545276233,3.84248103130121,3.64639359389732,7.81712397203867,5.6276261003168,4.43114918552749,4.12480019663135,5.41012387036591,2.23679334990361,1.13589289999776,0.68014404096107,0.289864488701678,0,0,0,0,0,1.96622188184453,2.21559419351475,1.81850203222008,1.06001872353102,0.845060518660083,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,3.19714863213368,0.258937883647172,0.29688427812965,0.346970653532272,0.608930956624282,0.461230994512117,0,0.940709657085638,0.753999547978053,0.988779870937496,0.433798070759735,0.884610551949874,1.45590164952668,0.220841518460394,0.484875253135222,1.86391761218122,0.878342391034642,1.04723353406728,0.255457055208591,0.359445373517761,0.599902730993408,1.27070227073065,2.84602214869163,2.28750301409313,2.51308704225729,1.39059456153821,1.79000820131231,2.70124457927428,2.27137768294861,0.509196819251581,0.622034853050465,0.505445516867349,0,0.650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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=19240 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-35bp_to_ENSMUST00000144337_5end | |||
|cluster_id=chr6:72908428..72908440,- | |||
|description=CAGE_peak_4_at_Tmsb10_5end | |||
|id=chr6:72908428..72908440,- | |||
|ontology_enrichment_celltype=CL:0000117!2.40e-12!23;CL:0000337!2.40e-12!23;CL:0000221!1.75e-11!44;CL:0000133!1.75e-11!44;CL:0002319!2.00e-11!43;CL:0000055!4.39e-11!50;CL:0000393!3.04e-08!39;CL:0000211!3.04e-08!39;CL:0000540!9.31e-08!33;CL:0000047!9.31e-08!33;CL:0000031!9.31e-08!33;CL:0000404!9.31e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.43e-16,23;CL:0000337,4.43e-16,23;CL:0002319,1.30e-13,43;CL:0000221,4.70e-13,44;CL:0000133,4.70e-13,44;CL:0000393,2.87e-09,39;CL:0000211,2.87e-09,39;CL:0000540,7.57e-09,33;CL:0000047,7.57e-09,33;CL:0000031,7.57e-09,33;CL:0000404,7.57e-09,33;CL:0002321,4.53e-07,70;CL:0002453,6.06e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.08e-20!75;UBERON:0001016!2.08e-20!75;UBERON:0001017!3.84e-20!73;UBERON:0005743!3.84e-20!73;UBERON:0001049!3.58e-18!52;UBERON:0005068!3.58e-18!52;UBERON:0006241!3.58e-18!52;UBERON:0007135!3.58e-18!52;UBERON:0000955!4.62e-17!50;UBERON:0006238!4.62e-17!50;UBERON:0002616!1.28e-16!49;UBERON:0000033!4.76e-15!63;UBERON:0002020!9.22e-15!34;UBERON:0004121!1.14e-14!102;UBERON:0000924!1.14e-14!102;UBERON:0006601!1.14e-14!102;UBERON:0002346!2.09e-14!71;UBERON:0003075!2.09e-14!71;UBERON:0007284!2.09e-14!71;UBERON:0003080!2.41e-12!40;UBERON:0003056!4.69e-12!49;UBERON:0002780!7.55e-12!39;UBERON:0001890!7.55e-12!39;UBERON:0006240!7.55e-12!39;UBERON:0002791!8.84e-12!29;UBERON:0003528!8.84e-12!29;UBERON:0001893!8.84e-12!29;UBERON:0000956!1.31e-07!21;UBERON:0001869!1.31e-07!21;UBERON:0000203!1.31e-07!21;UBERON:0002619!3.22e-07!17;UBERON:0003076!7.59e-07!12;UBERON:0003057!7.59e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.17e-24,73;UBERON:0000073,4.48e-24,54;UBERON:0001016,5.96e-24,75;UBERON:0001049,7.28e-22,52;UBERON:0005068,7.28e-22,52;UBERON:0006241,7.28e-22,52;UBERON:0007135,7.28e-22,52;UBERON:0002020,5.81e-19,34;UBERON:0002346,2.53e-18,64;UBERON:0003075,2.53e-18,64;UBERON:0007284,2.53e-18,64;UBERON:0004121,7.92e-18,95;UBERON:0000924,7.92e-18,95;UBERON:0006601,7.92e-18,95;UBERON:0000955,1.46e-17,47;UBERON:0006238,1.46e-17,47;UBERON:0002616,6.04e-17,46;UBERON:0010314,1.11e-15,92;UBERON:0003528,1.45e-14,29;UBERON:0002791,1.45e-14,29;UBERON:0001893,1.45e-14,29;UBERON:0003080,2.93e-14,40;UBERON:0010371,3.75e-14,73;UBERON:0002780,1.49e-13,39;UBERON:0001890,1.49e-13,39;UBERON:0006240,1.49e-13,39;UBERON:0003056,8.97e-13,49;UBERON:0002619,2.55e-09,17;UBERON:0000025,6.18e-09,114;UBERON:0003076,1.23e-08,12;UBERON:0003057,1.23e-08,12;UBERON:0000956,1.63e-08,21;UBERON:0001869,1.63e-08,21;UBERON:0000203,1.63e-08,21;UBERON:0002420,6.87e-08,8;UBERON:0007245,6.87e-08,8;UBERON:0010009,6.87e-08,8;UBERON:0010011,6.87e-08,8;UBERON:0000454,6.87e-08,8;UBERON:0004111,2.38e-07,122 | |||
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| |||
|short_description=p4@Tmsb10 | |||
}} |
Latest revision as of 17:50, 1 October 2015
Short description: | p4@Tmsb10 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Tmsb10_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | -35bp_to_ENSMUST00000144337_5end |
EntrezGene: | Tmsb10 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.43e-16 | 23 |
neuroblast (sensu Vertebrata) | 4.43e-16 | 23 |
neural cell | 1.30e-13 | 43 |
ectodermal cell | 4.70e-13 | 44 |
neurectodermal cell | 4.70e-13 | 44 |
electrically responsive cell | 2.87e-09 | 39 |
electrically active cell | 2.87e-09 | 39 |
neuron | 7.57e-09 | 33 |
neuronal stem cell | 7.57e-09 | 33 |
neuroblast | 7.57e-09 | 33 |
electrically signaling cell | 7.57e-09 | 33 |
embryonic cell | 4.53e-07 | 70 |
oligodendrocyte precursor cell | 6.06e-07 | 8 |