FFCP PHASE1:Hg19::chrX:151619726..151619743,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2556 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4077 | |||
|TSSclassifier=strong | |||
|UniProt=P34903 | |||
|association_with_transcript=86bp_to_ENST00000370314_5end | |||
|cluster_id=chrX:151619726..151619743,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_GABRA3_5end | |||
|id=chrX:151619726..151619743,- | |||
|ontology_enrichment_celltype=CL:0000064!2.39e-07!3;CL:0005012!2.39e-07!3;CL:0000067!2.39e-07!3;CL:0002304!2.39e-07!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.14e-15;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.71e-87!57;UBERON:0005068!9.71e-87!57;UBERON:0006241!9.71e-87!57;UBERON:0007135!9.71e-87!57;UBERON:0005743!1.13e-77!86;UBERON:0001017!5.25e-76!82;UBERON:0003075!7.71e-75!86;UBERON:0007284!7.71e-75!86;UBERON:0002616!4.11e-72!59;UBERON:0000073!4.74e-72!94;UBERON:0001016!4.74e-72!94;UBERON:0002346!6.94e-71!90;UBERON:0001893!1.17e-68!34;UBERON:0002020!2.23e-68!34;UBERON:0003528!2.23e-68!34;UBERON:0002780!4.49e-67!41;UBERON:0001890!4.49e-67!41;UBERON:0006240!4.49e-67!41;UBERON:0002791!4.72e-66!33;UBERON:0003080!2.89e-65!42;UBERON:0000955!5.34e-65!69;UBERON:0006238!5.34e-65!69;UBERON:0001869!2.15e-64!32;UBERON:0003056!2.24e-61!61;UBERON:0000956!8.59e-53!25;UBERON:0000203!8.59e-53!25;UBERON:0002619!1.96e-51!22;UBERON:0000033!1.57e-47!123;UBERON:0001950!9.71e-47!20;UBERON:0000153!1.61e-46!129;UBERON:0007811!1.61e-46!129;UBERON:0004121!8.70e-45!169;UBERON:0000924!2.14e-43!173;UBERON:0006601!2.14e-43!173;UBERON:0007023!1.41e-33!115;UBERON:0003076!2.06e-21!15;UBERON:0003057!2.06e-21!15;UBERON:0000064!3.45e-19!219;UBERON:0000025!1.27e-17!194;UBERON:0002420!8.30e-17!9;UBERON:0007245!8.30e-17!9;UBERON:0010009!8.30e-17!9;UBERON:0010011!8.30e-17!9;UBERON:0000454!8.30e-17!9;UBERON:0002308!1.15e-16!9;UBERON:0000125!1.15e-16!9;UBERON:0000200!2.36e-16!6;UBERON:0001871!8.05e-16!7;UBERON:0004733!3.60e-15!12;UBERON:0002028!3.60e-15!12;UBERON:0007277!3.60e-15!12;UBERON:0002298!1.01e-14!8;UBERON:0000483!3.52e-14!309;UBERON:0000119!6.68e-14!312;UBERON:0004732!7.34e-14!13;UBERON:0001872!1.25e-13!5;UBERON:0000349!2.08e-13!5;UBERON:0002021!5.43e-13!5;UBERON:0000477!1.24e-12!286;UBERON:0004111!1.53e-12!241;UBERON:0009663!2.44e-12!7;UBERON:0000475!9.08e-12!365;UBERON:0002680!3.04e-09!9;UBERON:0001895!3.04e-09!9;UBERON:0010092!3.04e-09!9;UBERON:0000488!3.69e-09!4;UBERON:0002771!9.25e-09!3;UBERON:0000988!1.75e-08!3;UBERON:0002240!2.42e-08!3;UBERON:0001896!2.61e-08!3;UBERON:0005290!2.61e-08!3;UBERON:0010096!2.61e-08!3;UBERON:0006331!5.34e-08!3;UBERON:0000062!7.48e-08!511;UBERON:0001778!2.39e-07!3;UBERON:0001775!2.39e-07!3;UBERON:0000481!2.52e-07!347;UBERON:0001870!9.09e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.21e-86;22!UBERON:0001950;9.40e-86;20!UBERON:0000956;1.06e-75;25!UBERON:0000203;1.06e-75;25!UBERON:0001893;4.55e-75;34!UBERON:0001869;2.08e-74;32!UBERON:0003528;1.74e-73;34!UBERON:0002020;1.74e-73;34!UBERON:0002791;7.72e-69;32!UBERON:0002780;2.40e-51;41!UBERON:0001890;2.40e-51;41!UBERON:0000073;4.76e-46;53!UBERON:0002616;4.76e-46;53!UBERON:0001017;9.63e-30;75!UBERON:0000200;8.01e-29;6!UBERON:0000955;3.72e-27;68!UBERON:0001871;7.33e-24;6!UBERON:0001872;7.42e-24;5!UBERON:0001016;4.60e-23;83!UBERON:0002021;8.30e-23;5!UBERON:0002298;7.86e-19;6!UBERON:0001870;1.77e-15;3!UBERON:0000349;1.81e-15;5!UBERON:0000988;3.10e-14;3!UBERON:0002420;8.64e-13;9!UBERON:0007245;8.64e-13;9!UBERON:0010009;8.64e-13;9!UBERON:0010011;8.64e-13;9!UBERON:0000454;8.64e-13;9!UBERON:0000125;1.17e-12;9!UBERON:0002308;1.17e-12;9!UBERON:0000369;3.21e-11;4!UBERON:0002435;3.21e-11;4!UBERON:0000204;3.21e-11;4!UBERON:0002702;1.04e-10;2!UBERON:0002771;1.85e-10;2!UBERON:0001876;3.83e-10;2!UBERON:0002148;6.70e-10;2!UBERON:0006331;6.70e-10;2!UBERON:0009662;6.70e-10;2!UBERON:0007023;7.85e-10;114!UBERON:0011216;2.17e-09;132!UBERON:0004733;2.61e-09;12!UBERON:0002028;2.61e-09;12!UBERON:0004732;1.42e-08;13!UBERON:0010314;2.64e-07;132!UBERON:0001896;4.91e-07;3!UBERON:0005383;4.91e-07;3!UBERON:0005290;4.91e-07;3!UBERON:0005382;4.91e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,3.31e-86,22;UBERON:0001950,1.16e-85,20;UBERON:0001893,1.40e-85,34;UBERON:0003528,3.77e-85,34;UBERON:0002020,3.77e-85,34;UBERON:0001869,2.94e-84,32;UBERON:0001049,5.60e-83,56;UBERON:0005068,5.60e-83,56;UBERON:0006241,5.60e-83,56;UBERON:0007135,5.60e-83,56;UBERON:0000073,2.69e-82,53;UBERON:0002616,2.69e-82,53;UBERON:0002791,3.62e-77,32;UBERON:0002780,5.95e-76,41;UBERON:0001890,5.95e-76,41;UBERON:0003080,5.95e-76,41;UBERON:0006240,5.95e-76,41;UBERON:0000956,1.09e-75,25;UBERON:0000203,1.09e-75,25;UBERON:0001017,2.13e-66,81;UBERON:0000955,2.67e-66,68;UBERON:0006238,2.67e-66,68;UBERON:0001016,6.52e-63,89;UBERON:0003075,8.91e-55,82;UBERON:0007284,8.91e-55,82;UBERON:0002346,6.22e-52,86;UBERON:0003056,1.85e-49,61;UBERON:0010371,8.20e-42,104;UBERON:0010314,8.11e-34,132;UBERON:0007023,4.07e-33,114;UBERON:0004121,1.04e-29,171;UBERON:0000924,1.04e-29,171;UBERON:0006601,1.04e-29,171;UBERON:0000200,7.66e-29,6;UBERON:0011216,1.30e-25,223;UBERON:0001871,5.66e-24,6;UBERON:0001872,8.37e-24,5;UBERON:0002021,1.26e-22,5;UBERON:0000025,5.46e-21,192;UBERON:0002298,6.03e-19,6;UBERON:0000349,1.27e-15,5;UBERON:0001870,1.73e-15,3;UBERON:0004111,2.36e-15,240;UBERON:0000988,2.58e-14,3;UBERON:0002420,9.22e-13,9;UBERON:0007245,9.22e-13,9;UBERON:0010009,9.22e-13,9;UBERON:0010011,9.22e-13,9;UBERON:0000454,9.22e-13,9;UBERON:0000125,1.34e-12,9;UBERON:0002308,1.34e-12,9;UBERON:0000369,4.04e-11,4;UBERON:0002435,4.04e-11,4;UBERON:0000204,4.04e-11,4;UBERON:0010082,4.04e-11,4;UBERON:0002702,1.06e-10,2;UBERON:0003076,1.35e-10,15;UBERON:0003057,1.35e-10,15;UBERON:0002771,1.72e-10,2;UBERON:0000483,1.74e-10,306;UBERON:0000119,2.58e-10,309;UBERON:0001876,3.18e-10,2;UBERON:0002148,6.40e-10,2;UBERON:0006331,6.40e-10,2;UBERON:0009662,6.40e-10,2;UBERON:0004733,2.30e-09,12;UBERON:0002028,2.30e-09,12;UBERON:0007277,2.30e-09,12;UBERON:0004732,1.26e-08,13;UBERON:0001896,4.48e-07,3;UBERON:0005290,4.48e-07,3;UBERON:0010096,4.48e-07,3;UBERON:0005383,6.27e-07,3;UBERON:0005382,6.27e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0.263766978228454,0,0,0,0,0,0,0.246242116153576,0,0,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,0.221729397462564,0.351339142772504,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515281080091258,0.744467425326359,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.60279707715243,0,0.502548796003046,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98244294329889,1.40669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.45286871176886,0,0,0,0,0,0,0,0,0,0,0,1.08536794762867,0,0.331737779793674,0.591095237907095,3.29078095730959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.706765357169704,0,0,0,0,0,0,0,1.14581926067151,0,0.937057782901357,0,0,0,0,0,2.75465485467441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.16373037092745,0,0,6.64763357536726,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0.600420288709789,0.410716136675979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97614844904652,0.953423842781029,0,0,0.415440338029185,0,0,8.68718660209753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0342636508924,1.98348902614035,0,0,0,0,0,0,0,0,0,0,0,0,0,3.76929831000562,4.43034089983493,4.14889300666675,2.754200475543,1.72022758707021,0.665574309221114,2.67014532647949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13352962756136,0,0,0,0,0,0,0,0,0,0,0,1.65910123382077,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,3.32525365389494,0,0,0,0,0,0,0,0,0,0,0,0,4.94565033242738,1.41696576325585,1.27707087245721,1.02558182120378,2.7727886584389,3.04291910842559,3.55246420390072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.94330744641873,3.12431239445539,1.86018116851066,6.02450196842115,1.09394961803644,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,2.7867590520501,5.39336743215362,0,0,0,2.51384943865603,0.280272163313789,0,0,0,0.500335809236594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37186772281816,0,0,0,0,0,0,0,0.785233868459781,0.891139200981258,3.8039015482506,0,0,0,0,0,0,0,0,0,0.286679166302903,0,6.25521709756415,1.74540276136151,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65833887891756,0.413731983447581,0,0.23806443146374,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@GABRA3 | |||
}} |
Latest revision as of 22:54, 19 September 2015
Short description: | p2@GABRA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GABRA3_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 86bp_to_ENST00000370314_5end |
EntrezGene: | GABRA3 |
HGNC: | 4077 |
UniProt: | P34903 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data