FFCP PHASE1:Hg19::chrX:50386616..50386637,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57477 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29215 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=45bp_to_ENST00000460112,uc004dpf.1_5end | |||
|cluster_id=chrX:50386616..50386637,- | |||
|coexpression_cluster_id=C2447 | |||
|description=CAGE_peak_3_at_SHROOM4_5end | |||
|id=chrX:50386616..50386637,- | |||
|ontology_enrichment_celltype=CL:0002139!3.62e-31!24;CL:0000115!1.07e-28!35;CL:0000071!2.52e-23!18;CL:0002546!2.52e-23!18;CL:0002078!8.70e-22!44;CL:0000213!2.40e-14!57;CL:0000215!2.40e-14!57;CL:1000413!1.45e-12!9;CL:0005020!2.21e-09!6;CL:0002138!2.21e-09!6;CL:0005022!2.21e-09!6;CL:0002543!2.30e-09!6;CL:0002544!4.12e-09!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.22e-35;24!CL:0000115;2.74e-29;36!CL:0000071;1.98e-26;18!CL:0002078;2.11e-16;45!CL:1000413;4.52e-14;9!CL:0000213;2.79e-11;58!CL:0000215;2.79e-11;58!CL:0002138;1.79e-10;6!CL:0002543;1.81e-10;6!CL:0002544;3.78e-10;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,2.26e-35,24;CL:0000115,2.10e-34,36;CL:0000071,2.07e-26,18;CL:0002546,2.07e-26,18;CL:0002078,2.74e-25,45;CL:0000213,3.01e-17,58;CL:0000215,3.01e-17,58;CL:1000413,4.06e-14,9;CL:0005020,1.73e-10,6;CL:0002138,1.73e-10,6;CL:0005022,1.73e-10,6;CL:0002543,1.82e-10,6;CL:0002544,3.53e-10,6 | |||
|ontology_enrichment_development_v019=CL:0002546;1.98e-26;18!CL:0005022;1.79e-10;6!UBERON:0006601;3.54e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.48e-75!115;UBERON:0001049!1.28e-33!57;UBERON:0005068!1.28e-33!57;UBERON:0006241!1.28e-33!57;UBERON:0007135!1.28e-33!57;UBERON:0004111!6.94e-31!241;UBERON:0000025!2.93e-28!194;UBERON:0000477!5.04e-28!286;UBERON:0002616!4.35e-27!59;UBERON:0003080!3.62e-26!42;UBERON:0002346!6.96e-26!90;UBERON:0003075!1.56e-25!86;UBERON:0007284!1.56e-25!86;UBERON:0002780!3.88e-25!41;UBERON:0001890!3.88e-25!41;UBERON:0006240!3.88e-25!41;UBERON:0000955!1.86e-24!69;UBERON:0006238!1.86e-24!69;UBERON:0001017!4.44e-24!82;UBERON:0005743!1.66e-23!86;UBERON:0001986!2.52e-23!18;UBERON:0004638!2.52e-23!18;UBERON:0004852!2.52e-23!18;UBERON:0002020!1.23e-21!34;UBERON:0003528!1.23e-21!34;UBERON:0001893!2.01e-21!34;UBERON:0000073!1.04e-20!94;UBERON:0001016!1.04e-20!94;UBERON:0002791!1.08e-20!33;UBERON:0001869!6.28e-20!32;UBERON:0000487!7.60e-18!22;UBERON:0002619!5.09e-17!22;UBERON:0003056!1.05e-16!61;UBERON:0006914!2.54e-16!25;UBERON:0000483!1.11e-15!309;UBERON:0001950!2.02e-15!20;UBERON:0000119!2.97e-15!312;UBERON:0000153!1.63e-14!129;UBERON:0007811!1.63e-14!129;UBERON:0000956!2.67e-14!25;UBERON:0000203!2.67e-14!25;UBERON:0000033!5.81e-13!123;UBERON:0003915!1.45e-12!9;UBERON:0004700!1.45e-12!9;UBERON:0001917!1.45e-12!9;UBERON:0000468!6.62e-12!659;UBERON:0000055!6.86e-12!69;UBERON:0000924!3.79e-11!173;UBERON:0006601!3.79e-11!173;UBERON:0000467!6.56e-11!625;UBERON:0000480!7.97e-11!626;UBERON:0004121!1.08e-10!169;UBERON:0002049!9.97e-10!79;UBERON:0007798!9.97e-10!79;UBERON:0000064!1.14e-09!219;UBERON:0002308!4.21e-09!9;UBERON:0000125!4.21e-09!9;UBERON:0002420!1.15e-08!9;UBERON:0007245!1.15e-08!9;UBERON:0010009!1.15e-08!9;UBERON:0010011!1.15e-08!9;UBERON:0000454!1.15e-08!9;UBERON:0002298!1.48e-08!8;UBERON:0003076!1.50e-08!15;UBERON:0003057!1.50e-08!15;UBERON:0004872!1.84e-08!84;UBERON:0000922!1.87e-08!612;UBERON:0001981!1.94e-08!60;UBERON:0007500!1.94e-08!60;UBERON:0004537!1.94e-08!60;UBERON:0006965!1.94e-08!60;UBERON:0001009!2.53e-08!113;UBERON:0002465!2.95e-08!10;UBERON:0002050!4.64e-08!605;UBERON:0005423!4.64e-08!605;UBERON:0000923!1.05e-07!604;UBERON:0005291!1.05e-07!604;UBERON:0006598!1.05e-07!604;UBERON:0002532!1.05e-07!604;UBERON:0001871!1.17e-07!7;UBERON:0001638!1.29e-07!9;UBERON:0003920!1.29e-07!9;UBERON:0004582!1.29e-07!9;UBERON:0000481!2.25e-07!347;UBERON:0009663!2.79e-07!7;UBERON:0004535!6.36e-07!110;UBERON:0004732!9.06e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.98e-26;18!UBERON:0001986;1.98e-26;18!UBERON:0004852;1.98e-26;18!UBERON:0000487;1.88e-20;22!UBERON:0003528;2.39e-19;34!UBERON:0002020;2.39e-19;34!UBERON:0002791;2.92e-19;32!UBERON:0001893;3.25e-19;34!UBERON:0001869;3.41e-19;32!UBERON:0002780;6.49e-19;41!UBERON:0001890;6.49e-19;41!UBERON:0002619;2.14e-17;22!UBERON:0006914;3.01e-17;25!UBERON:0000073;4.54e-16;53!UBERON:0002616;4.54e-16;53!UBERON:0007023;1.25e-15;114!UBERON:0001950;1.26e-15;20!UBERON:0000956;1.02e-14;25!UBERON:0000203;1.02e-14;25!UBERON:0003915;4.52e-14;9!UBERON:0004700;4.52e-14;9!UBERON:0001917;4.52e-14;9!UBERON:0000955;4.61e-11;68!UBERON:0001017;6.40e-11;75!UBERON:0000490;8.64e-11;33!UBERON:0000125;3.28e-10;9!UBERON:0002308;3.28e-10;9!UBERON:0002465;2.03e-09;10!UBERON:0001016;8.30e-09;83!UBERON:0001638;1.27e-08;9!UBERON:0003920;1.27e-08;9!UBERON:0004582;1.27e-08;9!UBERON:0009663;3.38e-08;7!UBERON:0002420;5.33e-08;9!UBERON:0007245;5.33e-08;9!UBERON:0010009;5.33e-08;9!UBERON:0010011;5.33e-08;9!UBERON:0000454;5.33e-08;9!UBERON:0000055;1.36e-07;65!UBERON:0001473;1.56e-07;8!UBERON:0004536;1.56e-07;8!UBERON:0006558;1.56e-07;8 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0,0,0.087834785693126,5.50112117090393,0,0,0,0,0,0,0,0,10.7331699978021,7.74211135595512,16.3156035755569,9.61023501270816,6.29249154314859,5.77747888074142,8.35979866147242,20.414923974377,23.4805733373229,20.0832367658802,6.44526907374635,2.28081631715554,5.36936526605973,9.92690316933846,8.91156142669936,16.9669483739752,14.3698798480749,16.2160531895984,13.7984973719295,13.2897192339538,7.69447324507711,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.763109092493,1.40241773803446,0,0,1.26755034821831,0,2.95394953340702,0,0,0,0,0,0,0,0,0,0,0,0,7.50705528357584,12.0376233269919,8.94194515502612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,1.30294473717494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.7853399292166,10.2056223165909,8.63663664408557,18.5072703228347,0,0,0,0,0,0,0,0,0,0,3.50339439602256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0,0.670302275535787,0,3.57746442951761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99764771198038,0,0,10.8416052661202,0,0,0,0.23874448473769,0,0,0.994147647766298,2.11004124615769,0,0,0,2.78947183551498,0.828851746593443,0,0,0,0,0,0,0,2.07151151837561,0,0,2.90799823828566,0.649376687132959,5.98841394003583,0,0,5.07499702804355,0,0,0,0,0,0,3.54296554325536,1.5677537021303,1.52581736317083,1.10579259931225,1.47773809476774,1.31631238292384,0,0,4.84786628573922,0,0.23056390438806,0,0,1.27600463892768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.619202951523374,1.83309043480088,0,0,0,2.3590396543237,4.81546588379273,2.34264445725339,0,0,0,3.15667522279512,2.41981432097328,1.53036380815245,4.48624715362264,0,0,0,0,0,0,0,0,0,0,0,5.41652671550293,0,0,0,0,2.03676934625681,0,2.93774963014692,0,0,1.83601308272048,0,0,1.70762395791482,0,0,0,0,0,0,0,0,0,0,0,3.00210144354895,1.64286454670392,0,0,0,8.65775443943988,7.79145441639724,9.33234931949858,4.5926170114768,8.15529491459485,4.24025769139558,7.18863155607971,0,0,0,0,0,0,0,2.38568906942791,1.77064427945048,0,0,0,0,0,2.30848315300494,0,2.67939404817274,3.19972987623488,0,0,0,5.71756261098694,5.95882773328889,0,0,0,0,0,0,0,0,0.439656701034247,0,5.04203529810047,1.85125642439766,0,0,10.9991034944726,22.3230113241526,14.0841278818046,3.47316215268366,0,0,0,2.1760712134779,10.2782856549307,3.982492497925,2.95085367638824,0,1.77213635993397,1.83039397352945,2.1282458220105,7.45431954397093,0.776503360757966,2.54595252059672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93561810612423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.22491806912648,0,0.123935764259002,0,0,0,0,0,0,2.63339822895484,2.8339315265117,1.75597244962866,1.02558182120378,1.00828678488687,1.45230230174858,3.71393984953257,1.42769420259154,0,0,0,0,0,0,0,1.42899623863589,0,0.781514011233092,0,0,0,1.68843961545987,1.56215619722769,1.2401207790071,2.98054307911362,0,0.548257766857182,10.4204347461752,0,0,4.28561468702629,1.3451348888753,0,0.227662191351298,6.20916591138472,0,0,2.51488012014277,1.44700101838268,0,0,1.72684804271131,2.04250266890802,0,3.65263488203798,0,0,5.36074081324923,0,0,0,0,0,0,0,0,0,0,1.69354820076372,0,0,0,0,0,0,4.53200186031526,2.77189578511867,1.1598144313382,1.94284397223656,0,0,0,0,0,0,0.694567422971502,1.31135736302374,0,2.45148321753905,0,2.74831853960923,1.48523200163543,5.0718687310008,0,0.0939839179798536,0.257831551894309,0,0,0,0,2.19100916473955,0.917458566809082,1.29005624836306,0,1.8357702351547,1.30905207102113,2.645134202577,0,0,0,0,0,0,0,0,0,0,1.28823786971007,0,2.48750831837634,1.44806194206653,4.4779136199206,5.47548192366603,0.516711278688049,1.11734485732544,0,0.891060215894309,5.65928129083014,7.18465268059972,2.73786640868225,1.21233695426258,1.86477734020959,1.99596213927608,0,0,0,0,2.34640942403454,6.23431365332619,2.84827324821017,2.66302709674205,3.22038069745642,0 | |||
|short_description=p3@SHROOM4 | |||
}} |
Latest revision as of 22:29, 15 September 2015
Short description: | p3@SHROOM4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SHROOM4_5end |
Coexpression cluster: | C2447_Renal_lung_Endothelial_adipose_heart_Hepatic_mature |
Association with transcript: | 45bp_to_ENST00000460112, uc004dpf.1_5end |
EntrezGene: | SHROOM4 |
HGNC: | 29215 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 2.26e-35 | 24 |
endothelial cell | 2.10e-34 | 36 |
blood vessel endothelial cell | 2.07e-26 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.07e-26 | 18 |
meso-epithelial cell | 2.74e-25 | 45 |
lining cell | 3.01e-17 | 58 |
barrier cell | 3.01e-17 | 58 |
endothelial cell of artery | 4.06e-14 | 9 |
lymphangioblast | 1.73e-10 | 6 |
endothelial cell of lymphatic vessel | 1.73e-10 | 6 |
vascular lymphangioblast | 1.73e-10 | 6 |
vein endothelial cell | 1.82e-10 | 6 |
aortic endothelial cell | 3.53e-10 | 6 |