FFCP PHASE1:Mm9::chr11:115560775..115560828,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:115560775..115560828,-
|short_description=p3@Grb2
|description=CAGE_peak_3_at_Grb2_5end
|association_with_transcript=0bp_to_uc007mij.1_5end
|EntrezGene=1...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=14784 | |EntrezGene=14784 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=Q3U5I5 | |UniProt=Q3U5I5 | ||
|association_with_transcript=0bp_to_uc007mij.1_5end | |||
|cluster_id=chr11:115560775..115560828,- | |||
|description=CAGE_peak_3_at_Grb2_5end | |||
|id=chr11:115560775..115560828,- | |||
|ontology_enrichment_celltype=CL:0000117!1.08e-15!23;CL:0000337!1.08e-15!23;CL:0002319!7.74e-13!43;CL:0000221!8.44e-13!44;CL:0000133!8.44e-13!44;CL:0000540!6.71e-12!33;CL:0000047!6.71e-12!33;CL:0000031!6.71e-12!33;CL:0000404!6.71e-12!33;CL:0000055!6.73e-11!50;CL:0000393!1.63e-10!39;CL:0000211!1.63e-10!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.76e-18,23;CL:0000337,1.76e-18,23;CL:0002319,2.59e-13,43;CL:0000221,2.74e-13,44;CL:0000133,2.74e-13,44;CL:0000540,3.53e-12,33;CL:0000047,3.53e-12,33;CL:0000031,3.53e-12,33;CL:0000404,3.53e-12,33;CL:0000393,3.39e-10,39;CL:0000211,3.39e-10,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.80e-28!73;UBERON:0005743!4.80e-28!73;UBERON:0000073!1.07e-26!75;UBERON:0001016!1.07e-26!75;UBERON:0001049!1.14e-24!52;UBERON:0005068!1.14e-24!52;UBERON:0006241!1.14e-24!52;UBERON:0007135!1.14e-24!52;UBERON:0000955!2.38e-23!50;UBERON:0006238!2.38e-23!50;UBERON:0002616!1.03e-22!49;UBERON:0000033!2.17e-22!63;UBERON:0002346!1.66e-21!71;UBERON:0003075!1.66e-21!71;UBERON:0007284!1.66e-21!71;UBERON:0004121!2.41e-21!102;UBERON:0000924!2.41e-21!102;UBERON:0006601!2.41e-21!102;UBERON:0002020!1.31e-19!34;UBERON:0003080!2.98e-18!40;UBERON:0003056!3.11e-18!49;UBERON:0002780!1.27e-17!39;UBERON:0001890!1.27e-17!39;UBERON:0006240!1.27e-17!39;UBERON:0002791!2.39e-16!29;UBERON:0003528!2.39e-16!29;UBERON:0001893!2.39e-16!29;UBERON:0000956!4.89e-11!21;UBERON:0001869!4.89e-11!21;UBERON:0000203!4.89e-11!21;UBERON:0007811!1.64e-10!86;UBERON:0000025!8.07e-10!114;UBERON:0004111!8.31e-10!122;UBERON:0000153!5.52e-09!94;UBERON:0002619!8.27e-09!17;UBERON:0003076!5.28e-07!12;UBERON:0003057!5.28e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.15e-31,73;UBERON:0000073,1.27e-30,54;UBERON:0001016,3.25e-29,75;UBERON:0001049,7.96e-29,52;UBERON:0005068,7.96e-29,52;UBERON:0006241,7.96e-29,52;UBERON:0007135,7.96e-29,52;UBERON:0002346,5.16e-26,64;UBERON:0003075,5.16e-26,64;UBERON:0007284,5.16e-26,64;UBERON:0004121,4.19e-25,95;UBERON:0000924,4.19e-25,95;UBERON:0006601,4.19e-25,95;UBERON:0000955,8.81e-25,47;UBERON:0006238,8.81e-25,47;UBERON:0002616,4.87e-24,46;UBERON:0002020,3.60e-23,34;UBERON:0010314,5.39e-22,92;UBERON:0003080,3.74e-21,40;UBERON:0010371,6.76e-21,73;UBERON:0002780,2.12e-20,39;UBERON:0001890,2.12e-20,39;UBERON:0006240,2.12e-20,39;UBERON:0003056,5.31e-20,49;UBERON:0003528,2.90e-19,29;UBERON:0002791,2.90e-19,29;UBERON:0001893,2.90e-19,29;UBERON:0000956,6.67e-13,21;UBERON:0001869,6.67e-13,21;UBERON:0000203,6.67e-13,21;UBERON:0002619,3.08e-10,17;UBERON:0004111,1.12e-08,122;UBERON:0000025,1.13e-08,114;UBERON:0003076,4.43e-08,12;UBERON:0003057,4.43e-08,12;UBERON:0002420,1.16e-07,8;UBERON:0007245,1.16e-07,8;UBERON:0010009,1.16e-07,8;UBERON:0010011,1.16e-07,8;UBERON:0000454,1.16e-07,8 | |||
|phase1_expression=0.80074423552397,0.348975407639361,0,0.30246421130683,1.00179145989269,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0.157731082679119,0,0,2.29616883407888,0,0,0,0,0,0,0.215471232685889,0.190023419456374,0.504060259519861,0.221730510655305,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0.503587271902309,0.506884656097573,1.28482726513177,1.56478268869608,2.39827672018491,2.85592037554813,4.47188767870852,3.07970127575798,1.43752564364972,0,0.725362142011344,0,1.02903774414379,1.43266719969378,0.515672092277442,12.9482534950143,10.5798195854407,12.6766280701236,1.0165335962074,2.66788438833342,1.7997994345628,0,0.7104801149461,3.29560121570245,4.2264013585371,9.02099627083756,9.72042755988173,7.15104868594699,13.139945282575,10.6016899656774,5.75706756310284,10.543001812006,6.43453150627015,7.70811166995721,12.3856717942632,12.595735727012,11.8697658957174,18.2060410768795,13.5437476344758,17.3093459380856,7.87867654044352,15.1270265299042,6.77645746589436,10.6778760599327,10.4383689662168,0.227178579999552,0.453429360640713,0.289864488701678,0,0,0.539703191637817,0,0,1.82577746171277,1.87473354835864,0.779358013808606,2.12003744706204,1.12674735821344,1.28326477414318,2.54805239706646,0,0.432982082022428,0.253359865475099,0,0.5709193985953,0.258937883647172,0.593768556259299,0.693941307064543,0.608930956624282,0.922461989024234,0.60289056221049,0.705532242814229,0.628332956648377,1.73036477414062,0.722996784599558,2.65383165584962,3.558870698843,2.42925670306433,0.484875253135222,0,5.5628351432194,5.23616767033638,0.255457055208591,0,0,0,8.98743836428936,8.23501085073528,9.80103946480342,7.12679712788333,6.90431734791892,7.06479351502504,8.4365456795234,0.611036183101898,0.746441823660558,0.505445516867349,1.05220927943237,0.780722657776222,2.29902104433473,0.900310649026746,2.41127708537144,1.42876648217788,1.5373646434182,1.59292931751539,2.06962696591213,0,0.756424320671277,0.703804496655795,1.09597866213787,0.278047249225598,0.348252166522167,1.02891068203972,0.398068533636986,0,0,0,0.414251545071004,0.469052119962192,1.44049649168812,0.946978942340841,0.393528463494808,2.00547246753592,2.09280550275367,2.68273401399619,2.6856028744449,3.78487654801005,4.10418660197738,3.89130285820108,4.5321996101853,1.3173006917463,4.02619256281115,7.14985825118033,8.02655976558419,0,0,1.06644125267617,0.696710015581316,1.15980715189884,0.605050573870028,0.667134131534611,1.52180500890047,1.42358718463353,1.31759163779209,1.25667604400135,1.39269530428806,0.779856348476481,0,1.08069024937347,1.1948476395262,1.13800740571849,0.456994050438915,0,0.610953983535943,0.969762435838129,0.561086559122548,0.442655759869801,0.590440591918409,0.156998727841375,1.1105744752962,0,0.166845105716094,0.393117990226406,0.224862112384854,0,0.72353147925725,0.763877555344259,0.575392274901621,0.162135226775035,0.274561413188081,1.43768206527355,0.372140947668503,0.936113019343682,0,0.358794827043824,0,0.369506380333209,0.757965647081939,0.162964976442026,0.339490171550376,0.469380496577004,1.34005005953453,0.714130922658041,0.195133647857799,0.315270288212382,0.664394068946325,0.637819074629948,0.81931657357869,0.518054945597687,0.289298117163023,0,0,0,0,7.54587772942622,7.61875962849321,0,7.32165688892682,0.315508219416257,0.780877488593277,1.50796378412959,1.91175038362042,1.11399337041197,0,0.809621403349789,1.16902343164525,0.790575555893047,7.71171159412337,0.425820255624806,1.06839362200353,0.488660878060728,0.494910368917606,0,0.242780636154981,0.302323556964751,0.754420319023592,0,0.307435147943927,0.516856586336442,0.363533729477506,1.06949213515416,0,0,0,3.40439605753788,1.08036656418786,1.03486947026204,2.57204442037911,2.30542303734956,1.96205699362278,3.1264313914403,0.608929898229199,0.704015124191131,1.27099242518292,1.7642271844397,0.65954501176592,0.161464426695906,1.20625849856312,0.358117032009409,0,0.582961673259701,7.6024373824309,0.512612642393558,0.82554747185289,0.925972636848558,0.376736914009382,0.136694227721025,0.228778173206523,0,0.139951452323658,0,0,0.316335993581135,0.609958401380546,0.86404272657441,1.04544148007234,1.09181281873089,0.404593039154462,0.661227645802687,2.6175594198403,3.49960427887841,0,0.56369293868419,0.448549638131936,0.330916980914195,0.972255941720238,0.387479470433193,0.675824501963113,0.704143431874524,1.0416350787516,0.419437377702843,0,1.15212002503146,0.632022241256357,0.202725215290164,0.616265742988964,0.389762468933385,0.716106782669926,0.596044064343795,0.120195449519969,0.443068581523732,0.302899349844443,0.0762068066549998,0,0,0.0962118416403295,0,3.40095575422817,0.665957860122194,0.0897138566094757,0.335769232728157,2.12508553435409,0.93841237725591,0.183151624267265,0.214368379079066,1.00314420807073,6.7770221114048,5.06357760157895,5.72895513439397,2.57779773515531,6.16574267793578,4.5323633843382,6.07520250208625,7.65546045481175,3.17199686288943,4.14208249401456,0.93408612825759,1.59609949360412,1.19513524027894,2.67417388775123,1.88651846365184,1.47074806760011,2.66696073361938,2.26638562962784,1.60459604795908,2.52697211763797,1.2673964994512,3.01802146217722,3.27745276144588,3.26528277264833,4.19278923375977,2.85776214769844,3.94006708212509,4.43691207066522,5.76920261124629,3.53277408322554,3.08582327146874,2.48466128623072,2.14592570952589,2.61623549938191,3.10560955370591,2.03075058940024,2.74391959309159,3.6829759601298,3.12349461845482,0.561142271657738,2.01679530811096,2.36410757701352,2.04615521584845,3.56354734727722,2.3148793317737,2.99772693525535,1.40358965067245,1.71896843238639,1.14772999241306,2.42650561031467,3.47801753430632 | |phase1_expression=0.80074423552397,0.348975407639361,0,0.30246421130683,1.00179145989269,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0.157731082679119,0,0,2.29616883407888,0,0,0,0,0,0,0.215471232685889,0.190023419456374,0.504060259519861,0.221730510655305,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0.503587271902309,0.506884656097573,1.28482726513177,1.56478268869608,2.39827672018491,2.85592037554813,4.47188767870852,3.07970127575798,1.43752564364972,0,0.725362142011344,0,1.02903774414379,1.43266719969378,0.515672092277442,12.9482534950143,10.5798195854407,12.6766280701236,1.0165335962074,2.66788438833342,1.7997994345628,0,0.7104801149461,3.29560121570245,4.2264013585371,9.02099627083756,9.72042755988173,7.15104868594699,13.139945282575,10.6016899656774,5.75706756310284,10.543001812006,6.43453150627015,7.70811166995721,12.3856717942632,12.595735727012,11.8697658957174,18.2060410768795,13.5437476344758,17.3093459380856,7.87867654044352,15.1270265299042,6.77645746589436,10.6778760599327,10.4383689662168,0.227178579999552,0.453429360640713,0.289864488701678,0,0,0.539703191637817,0,0,1.82577746171277,1.87473354835864,0.779358013808606,2.12003744706204,1.12674735821344,1.28326477414318,2.54805239706646,0,0.432982082022428,0.253359865475099,0,0.5709193985953,0.258937883647172,0.593768556259299,0.693941307064543,0.608930956624282,0.922461989024234,0.60289056221049,0.705532242814229,0.628332956648377,1.73036477414062,0.722996784599558,2.65383165584962,3.558870698843,2.42925670306433,0.484875253135222,0,5.5628351432194,5.23616767033638,0.255457055208591,0,0,0,8.98743836428936,8.23501085073528,9.80103946480342,7.12679712788333,6.90431734791892,7.06479351502504,8.4365456795234,0.611036183101898,0.746441823660558,0.505445516867349,1.05220927943237,0.780722657776222,2.29902104433473,0.900310649026746,2.41127708537144,1.42876648217788,1.5373646434182,1.59292931751539,2.06962696591213,0,0.756424320671277,0.703804496655795,1.09597866213787,0.278047249225598,0.348252166522167,1.02891068203972,0.398068533636986,0,0,0,0.414251545071004,0.469052119962192,1.44049649168812,0.946978942340841,0.393528463494808,2.00547246753592,2.09280550275367,2.68273401399619,2.6856028744449,3.78487654801005,4.10418660197738,3.89130285820108,4.5321996101853,1.3173006917463,4.02619256281115,7.14985825118033,8.02655976558419,0,0,1.06644125267617,0.696710015581316,1.15980715189884,0.605050573870028,0.667134131534611,1.52180500890047,1.42358718463353,1.31759163779209,1.25667604400135,1.39269530428806,0.779856348476481,0,1.08069024937347,1.1948476395262,1.13800740571849,0.456994050438915,0,0.610953983535943,0.969762435838129,0.561086559122548,0.442655759869801,0.590440591918409,0.156998727841375,1.1105744752962,0,0.166845105716094,0.393117990226406,0.224862112384854,0,0.72353147925725,0.763877555344259,0.575392274901621,0.162135226775035,0.274561413188081,1.43768206527355,0.372140947668503,0.936113019343682,0,0.358794827043824,0,0.369506380333209,0.757965647081939,0.162964976442026,0.339490171550376,0.469380496577004,1.34005005953453,0.714130922658041,0.195133647857799,0.315270288212382,0.664394068946325,0.637819074629948,0.81931657357869,0.518054945597687,0.289298117163023,0,0,0,0,7.54587772942622,7.61875962849321,0,7.32165688892682,0.315508219416257,0.780877488593277,1.50796378412959,1.91175038362042,1.11399337041197,0,0.809621403349789,1.16902343164525,0.790575555893047,7.71171159412337,0.425820255624806,1.06839362200353,0.488660878060728,0.494910368917606,0,0.242780636154981,0.302323556964751,0.754420319023592,0,0.307435147943927,0.516856586336442,0.363533729477506,1.06949213515416,0,0,0,3.40439605753788,1.08036656418786,1.03486947026204,2.57204442037911,2.30542303734956,1.96205699362278,3.1264313914403,0.608929898229199,0.704015124191131,1.27099242518292,1.7642271844397,0.65954501176592,0.161464426695906,1.20625849856312,0.358117032009409,0,0.582961673259701,7.6024373824309,0.512612642393558,0.82554747185289,0.925972636848558,0.376736914009382,0.136694227721025,0.228778173206523,0,0.139951452323658,0,0,0.316335993581135,0.609958401380546,0.86404272657441,1.04544148007234,1.09181281873089,0.404593039154462,0.661227645802687,2.6175594198403,3.49960427887841,0,0.56369293868419,0.448549638131936,0.330916980914195,0.972255941720238,0.387479470433193,0.675824501963113,0.704143431874524,1.0416350787516,0.419437377702843,0,1.15212002503146,0.632022241256357,0.202725215290164,0.616265742988964,0.389762468933385,0.716106782669926,0.596044064343795,0.120195449519969,0.443068581523732,0.302899349844443,0.0762068066549998,0,0,0.0962118416403295,0,3.40095575422817,0.665957860122194,0.0897138566094757,0.335769232728157,2.12508553435409,0.93841237725591,0.183151624267265,0.214368379079066,1.00314420807073,6.7770221114048,5.06357760157895,5.72895513439397,2.57779773515531,6.16574267793578,4.5323633843382,6.07520250208625,7.65546045481175,3.17199686288943,4.14208249401456,0.93408612825759,1.59609949360412,1.19513524027894,2.67417388775123,1.88651846365184,1.47074806760011,2.66696073361938,2.26638562962784,1.60459604795908,2.52697211763797,1.2673964994512,3.01802146217722,3.27745276144588,3.26528277264833,4.19278923375977,2.85776214769844,3.94006708212509,4.43691207066522,5.76920261124629,3.53277408322554,3.08582327146874,2.48466128623072,2.14592570952589,2.61623549938191,3.10560955370591,2.03075058940024,2.74391959309159,3.6829759601298,3.12349461845482,0.561142271657738,2.01679530811096,2.36410757701352,2.04615521584845,3.56354734727722,2.3148793317737,2.99772693525535,1.40358965067245,1.71896843238639,1.14772999241306,2.42650561031467,3.47801753430632 | ||
|short_description=p3@Grb2 | |||
}} | }} |
Latest revision as of 23:26, 26 September 2015
Short description: | p3@Grb2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Grb2_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 0bp_to_uc007mij.1_5end |
EntrezGene: | Grb2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.76e-18 | 23 |
neuroblast (sensu Vertebrata) | 1.76e-18 | 23 |
neural cell | 2.59e-13 | 43 |
ectodermal cell | 2.74e-13 | 44 |
neurectodermal cell | 2.74e-13 | 44 |
neuron | 3.53e-12 | 33 |
neuronal stem cell | 3.53e-12 | 33 |
neuroblast | 3.53e-12 | 33 |
electrically signaling cell | 3.53e-12 | 33 |
electrically responsive cell | 3.39e-10 | 39 |
electrically active cell | 3.39e-10 | 39 |