FFCP PHASE1:Mm9::chr7:3366466..3366480,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=168|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:3366466..3366480,+|id=chr7:3366466..3366480,+|ontology_enrichment_celltype=CL:0000117!3.45e-12!23;CL:0000337!3.45e-12!23;CL:0000393!1.49e-09!39;CL:0000211!1.49e-09!39;CL:0000540!1.91e-09!33;CL:0000047!1.91e-09!33;CL:0000031!1.91e-09!33;CL:0000404!1.91e-09!33;CL:0000221!3.08e-09!44;CL:0000133!3.08e-09!44;CL:0002319!4.19e-09!43;CL:0000055!5.94e-09!50|ontology_enrichment_celltype_v019_2=CL:0000117,3.84e-16,23;CL:0000337,3.84e-16,23;CL:0002319,1.18e-13,43;CL:0000221,2.71e-13,44;CL:0000133,2.71e-13,44;CL:0002610,4.25e-13,3;CL:0002609,7.61e-11,6;CL:0000540,9.01e-11,33;CL:0000047,9.01e-11,33;CL:0000031,9.01e-11,33;CL:0000404,9.01e-11,33;CL:0000393,7.19e-09,39;CL:0000211,7.19e-09,39;CL:0002321,1.61e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.27e-23!73;UBERON:0005743!1.27e-23!73;UBERON:0000073!2.41e-22!75;UBERON:0001016!2.41e-22!75;UBERON:0002346!2.69e-21!71;UBERON:0003075!2.69e-21!71;UBERON:0007284!2.69e-21!71;UBERON:0001049!3.63e-21!52;UBERON:0005068!3.63e-21!52;UBERON:0006241!3.63e-21!52;UBERON:0007135!3.63e-21!52;UBERON:0000955!8.04e-21!50;UBERON:0006238!8.04e-21!50;UBERON:0004121!5.04e-20!102;UBERON:0000924!5.04e-20!102;UBERON:0006601!5.04e-20!102;UBERON:0000033!5.50e-20!63;UBERON:0002616!5.99e-20!49;UBERON:0002020!1.25e-15!34;UBERON:0003056!1.64e-15!49;UBERON:0003080!1.97e-14!40;UBERON:0002780!9.20e-14!39;UBERON:0001890!9.20e-14!39;UBERON:0006240!9.20e-14!39;UBERON:0002791!7.73e-13!29;UBERON:0003528!7.73e-13!29;UBERON:0001893!7.73e-13!29;UBERON:0000153!1.97e-12!94;UBERON:0007811!1.69e-11!86;UBERON:0000956!5.31e-10!21;UBERON:0001869!5.31e-10!21;UBERON:0000203!5.31e-10!21;UBERON:0000025!8.65e-08!114;UBERON:0003076!1.27e-07!12;UBERON:0003057!1.27e-07!12;UBERON:0002619!2.29e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.80e-24,73;UBERON:0001016,3.07e-23,75;UBERON:0000073,1.81e-21,54;UBERON:0004121,1.15e-17,95;UBERON:0000924,1.15e-17,95;UBERON:0006601,1.15e-17,95;UBERON:0000955,6.96e-17,47;UBERON:0006238,6.96e-17,47;UBERON:0001049,5.93e-15,52;UBERON:0005068,5.93e-15,52;UBERON:0006241,5.93e-15,52;UBERON:0007135,5.93e-15,52;UBERON:0002616,8.19e-15,46;UBERON:0004684,4.25e-13,3;UBERON:0002275,4.25e-13,3;UBERON:0002346,1.17e-11,64;UBERON:0003075,1.17e-11,64;UBERON:0007284,1.17e-11,64;UBERON:0000956,2.32e-11,21;UBERON:0001869,2.32e-11,21;UBERON:0000203,2.32e-11,21;UBERON:0004733,3.27e-11,6;UBERON:0004732,3.27e-11,6;UBERON:0002028,3.27e-11,6;UBERON:0007277,3.27e-11,6;UBERON:0002020,2.25e-10,34;UBERON:0003528,5.43e-10,29;UBERON:0002791,5.43e-10,29;UBERON:0001893,5.43e-10,29;UBERON:0002037,6.45e-10,4;UBERON:0002680,6.45e-10,4;UBERON:0001895,6.45e-10,4;UBERON:0010092,6.45e-10,4;UBERON:0006215,6.45e-10,4;UBERON:0010371,6.80e-10,73;UBERON:0002780,9.96e-09,39;UBERON:0001890,9.96e-09,39;UBERON:0006240,9.96e-09,39;UBERON:0003080,1.80e-08,40;UBERON:0003076,1.81e-08,12;UBERON:0003057,1.81e-08,12;UBERON:0002619,2.65e-08,17;UBERON:0010314,2.66e-07,92;UBERON:0011216,6.78e-07,194;UBERON:0002021,7.90e-07,10;UBERON:0000411,7.90e-07,10;UBERON:0001950,7.90e-07,10|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.811015449756117,0.183546752161682,0,1.09012578190223,0,0.194429899074283,0.139986421625363,1.43752564364972,0,0,0,0.257259436035947,0,0,0.202316460859598,0,1.90149421051854,0,0,0,0,0,0,1.15265491596466,0.622137673850866,1.21505344498522,1.05162480675691,0.285650984403804,0.220868540951614,0.489963196859816,1.24599112323707,1.83843757322004,1.10115880999389,1.91531007127782,2.15049146558741,0.395658863190582,0.823388792421687,0,1.11673199600552,0.56276261003168,0.15279824777681,0.883885756421003,1.56608848879013,0.745597783301202,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0.251333182659351,0,0,0,0.161766849947409,0,0,0,1.46390398505774,5.65506108396329,0.766371165625774,0,0,0,0.898743836428936,0.915001205637253,0.376963056338593,0.869121600961382,0.767146371990992,1.0389402227978,0.648965052271031,0.101839363850316,0.248813941220186,0,0,0.390361328888111,0,0.540186389416048,0.30140963567143,0.136072998302656,0.12811372028485,0.281105173679186,0.258703370739016,0.215567992932842,0.189106080167819,0.175951124163949,0.219195732427575,0.278047249225598,0,0.205782136407943,0.398068533636986,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0.164167464079095,0,0,0,0.268412837520744,0.420579897128254,0.308713837137853,0,0,0,0.696710015581316,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0.379335801906163,0.342745537829186,0,0.203651327845314,0,0.210407459670956,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0.312037673114561,0,0,0,0,0,0.162964976442026,0,0,0.167506257441816,0,0,0.315270288212382,0.664394068946325,0,0,0,0,0,0,0,0,0.80275294993896,1.28932855251423,0.491804836130026,0,0.315508219416257,0,0.215423397732799,0.477937595905104,0,0,0,0.292255857911312,0,2.24924921495265,0,0.178065603667255,0.162886959353576,0.164970122972535,0,0.242780636154981,0.604647113929502,0,0,0,0,0,0,0,0,0,0.340439605753788,0.720244376125241,0.258717367565509,0.214337035031592,0,0.178368817602071,0,0,0,0,0,0,0.322928853391811,0.120625849856312,0,0,0.291480836629851,0.927126510052548,0,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0,0.108005340821801,0.209088296014469,0,0.269728692769641,0,0,0,0,0,0.448549638131936,0,0.194451188344048,0,0.337912250981556,0.469428954583016,0,0.104859344425711,0,0,0,0.202725215290164,0,0.129920822977795,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36630324853453,0,0,0.564751842617067,0.460325236507177,2.29158205375759,1.3748254587495,0.685082519770642,2.2661816921691,0,0.900642406448441,0,1.03552062350364,0.31136204275253,0.798049746802062,0,0.243106717068294,0.419226325255965,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0,0,0,0,0.342869252385415,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0,0,0.474540072496697,0.0985044823755635,0,0,0,0.249810577937946,0.467863216890817,0.214871054048298,0.191288332068843,0,0.231867835620421|short_description=p@chr7:3366466..3366480,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=168 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:3366466..3366480,+ | |||
|description=CAGE_peak_at_chr7:3366466..3366480,+ | |||
|id=chr7:3366466..3366480,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.45e-12!23;CL:0000337!3.45e-12!23;CL:0000393!1.49e-09!39;CL:0000211!1.49e-09!39;CL:0000540!1.91e-09!33;CL:0000047!1.91e-09!33;CL:0000031!1.91e-09!33;CL:0000404!1.91e-09!33;CL:0000221!3.08e-09!44;CL:0000133!3.08e-09!44;CL:0002319!4.19e-09!43;CL:0000055!5.94e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.84e-16,23;CL:0000337,3.84e-16,23;CL:0002319,1.18e-13,43;CL:0000221,2.71e-13,44;CL:0000133,2.71e-13,44;CL:0002610,4.25e-13,3;CL:0002609,7.61e-11,6;CL:0000540,9.01e-11,33;CL:0000047,9.01e-11,33;CL:0000031,9.01e-11,33;CL:0000404,9.01e-11,33;CL:0000393,7.19e-09,39;CL:0000211,7.19e-09,39;CL:0002321,1.61e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.27e-23!73;UBERON:0005743!1.27e-23!73;UBERON:0000073!2.41e-22!75;UBERON:0001016!2.41e-22!75;UBERON:0002346!2.69e-21!71;UBERON:0003075!2.69e-21!71;UBERON:0007284!2.69e-21!71;UBERON:0001049!3.63e-21!52;UBERON:0005068!3.63e-21!52;UBERON:0006241!3.63e-21!52;UBERON:0007135!3.63e-21!52;UBERON:0000955!8.04e-21!50;UBERON:0006238!8.04e-21!50;UBERON:0004121!5.04e-20!102;UBERON:0000924!5.04e-20!102;UBERON:0006601!5.04e-20!102;UBERON:0000033!5.50e-20!63;UBERON:0002616!5.99e-20!49;UBERON:0002020!1.25e-15!34;UBERON:0003056!1.64e-15!49;UBERON:0003080!1.97e-14!40;UBERON:0002780!9.20e-14!39;UBERON:0001890!9.20e-14!39;UBERON:0006240!9.20e-14!39;UBERON:0002791!7.73e-13!29;UBERON:0003528!7.73e-13!29;UBERON:0001893!7.73e-13!29;UBERON:0000153!1.97e-12!94;UBERON:0007811!1.69e-11!86;UBERON:0000956!5.31e-10!21;UBERON:0001869!5.31e-10!21;UBERON:0000203!5.31e-10!21;UBERON:0000025!8.65e-08!114;UBERON:0003076!1.27e-07!12;UBERON:0003057!1.27e-07!12;UBERON:0002619!2.29e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.80e-24,73;UBERON:0001016,3.07e-23,75;UBERON:0000073,1.81e-21,54;UBERON:0004121,1.15e-17,95;UBERON:0000924,1.15e-17,95;UBERON:0006601,1.15e-17,95;UBERON:0000955,6.96e-17,47;UBERON:0006238,6.96e-17,47;UBERON:0001049,5.93e-15,52;UBERON:0005068,5.93e-15,52;UBERON:0006241,5.93e-15,52;UBERON:0007135,5.93e-15,52;UBERON:0002616,8.19e-15,46;UBERON:0004684,4.25e-13,3;UBERON:0002275,4.25e-13,3;UBERON:0002346,1.17e-11,64;UBERON:0003075,1.17e-11,64;UBERON:0007284,1.17e-11,64;UBERON:0000956,2.32e-11,21;UBERON:0001869,2.32e-11,21;UBERON:0000203,2.32e-11,21;UBERON:0004733,3.27e-11,6;UBERON:0004732,3.27e-11,6;UBERON:0002028,3.27e-11,6;UBERON:0007277,3.27e-11,6;UBERON:0002020,2.25e-10,34;UBERON:0003528,5.43e-10,29;UBERON:0002791,5.43e-10,29;UBERON:0001893,5.43e-10,29;UBERON:0002037,6.45e-10,4;UBERON:0002680,6.45e-10,4;UBERON:0001895,6.45e-10,4;UBERON:0010092,6.45e-10,4;UBERON:0006215,6.45e-10,4;UBERON:0010371,6.80e-10,73;UBERON:0002780,9.96e-09,39;UBERON:0001890,9.96e-09,39;UBERON:0006240,9.96e-09,39;UBERON:0003080,1.80e-08,40;UBERON:0003076,1.81e-08,12;UBERON:0003057,1.81e-08,12;UBERON:0002619,2.65e-08,17;UBERON:0010314,2.66e-07,92;UBERON:0011216,6.78e-07,194;UBERON:0002021,7.90e-07,10;UBERON:0000411,7.90e-07,10;UBERON:0001950,7.90e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.811015449756117,0.183546752161682,0,1.09012578190223,0,0.194429899074283,0.139986421625363,1.43752564364972,0,0,0,0.257259436035947,0,0,0.202316460859598,0,1.90149421051854,0,0,0,0,0,0,1.15265491596466,0.622137673850866,1.21505344498522,1.05162480675691,0.285650984403804,0.220868540951614,0.489963196859816,1.24599112323707,1.83843757322004,1.10115880999389,1.91531007127782,2.15049146558741,0.395658863190582,0.823388792421687,0,1.11673199600552,0.56276261003168,0.15279824777681,0.883885756421003,1.56608848879013,0.745597783301202,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0.251333182659351,0,0,0,0.161766849947409,0,0,0,1.46390398505774,5.65506108396329,0.766371165625774,0,0,0,0.898743836428936,0.915001205637253,0.376963056338593,0.869121600961382,0.767146371990992,1.0389402227978,0.648965052271031,0.101839363850316,0.248813941220186,0,0,0.390361328888111,0,0.540186389416048,0.30140963567143,0.136072998302656,0.12811372028485,0.281105173679186,0.258703370739016,0.215567992932842,0.189106080167819,0.175951124163949,0.219195732427575,0.278047249225598,0,0.205782136407943,0.398068533636986,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0.164167464079095,0,0,0,0.268412837520744,0.420579897128254,0.308713837137853,0,0,0,0.696710015581316,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0.379335801906163,0.342745537829186,0,0.203651327845314,0,0.210407459670956,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0.312037673114561,0,0,0,0,0,0.162964976442026,0,0,0.167506257441816,0,0,0.315270288212382,0.664394068946325,0,0,0,0,0,0,0,0,0.80275294993896,1.28932855251423,0.491804836130026,0,0.315508219416257,0,0.215423397732799,0.477937595905104,0,0,0,0.292255857911312,0,2.24924921495265,0,0.178065603667255,0.162886959353576,0.164970122972535,0,0.242780636154981,0.604647113929502,0,0,0,0,0,0,0,0,0,0.340439605753788,0.720244376125241,0.258717367565509,0.214337035031592,0,0.178368817602071,0,0,0,0,0,0,0.322928853391811,0.120625849856312,0,0,0.291480836629851,0.927126510052548,0,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0,0.108005340821801,0.209088296014469,0,0.269728692769641,0,0,0,0,0,0.448549638131936,0,0.194451188344048,0,0.337912250981556,0.469428954583016,0,0.104859344425711,0,0,0,0.202725215290164,0,0.129920822977795,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36630324853453,0,0,0.564751842617067,0.460325236507177,2.29158205375759,1.3748254587495,0.685082519770642,2.2661816921691,0,0.900642406448441,0,1.03552062350364,0.31136204275253,0.798049746802062,0,0.243106717068294,0.419226325255965,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0,0,0,0,0.342869252385415,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0,0,0.474540072496697,0.0985044823755635,0,0,0,0.249810577937946,0.467863216890817,0.214871054048298,0.191288332068843,0,0.231867835620421 | |||
|short_description=p@chr7:3366466..3366480,+ | |||
}} |
Latest revision as of 02:42, 5 August 2015
Short description: | p@chr7:3366466..3366480, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:3366466..3366480, + |
Coexpression cluster: | MCL_coexpression_mm9:168 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.84e-16 | 23 |
neuroblast (sensu Vertebrata) | 3.84e-16 | 23 |
neural cell | 1.18e-13 | 43 |
ectodermal cell | 2.71e-13 | 44 |
neurectodermal cell | 2.71e-13 | 44 |
raphe nuclei neuron | 4.25e-13 | 3 |
neuron of cerebral cortex | 7.61e-11 | 6 |
neuron | 9.01e-11 | 33 |
neuronal stem cell | 9.01e-11 | 33 |
neuroblast | 9.01e-11 | 33 |
electrically signaling cell | 9.01e-11 | 33 |
electrically responsive cell | 7.19e-09 | 39 |
electrically active cell | 7.19e-09 | 39 |
embryonic cell | 1.61e-07 | 70 |