FFCP PHASE1:Mm9::chr7:4874199..4874215,+: Difference between revisions
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{{FFCP|EntrezGene=269854|HGNC=|MCL_coexpression_id=2|UniProt=|association_with_transcript=-336bp_to_uc009eyz.2_5end|description=CAGE_peak_3_at_Nat14_5end|id=chr7:4874199..4874215,+|ontology_enrichment_celltype=CL:0002319!2.42e-13!43;CL:0000221!2.62e-13!44;CL:0000133!2.62e-13!44;CL:0000117!4.07e-13!23;CL:0000337!4.07e-13!23;CL:0000055!2.60e-11!50;CL:0000540!4.16e-09!33;CL:0000047!4.16e-09!33;CL:0000031!4.16e-09!33;CL:0000404!4.16e-09!33;CL:0000393!6.56e-08!39;CL:0000211!6.56e-08!39|ontology_enrichment_celltype_v019_2=CL:0000117,4.86e-21,23;CL:0000337,4.86e-21,23;CL:0002319,1.04e-19,43;CL:0000221,5.03e-19,44;CL:0000133,5.03e-19,44;CL:0000540,1.06e-13,33;CL:0000047,1.06e-13,33;CL:0000031,1.06e-13,33;CL:0000404,1.06e-13,33;CL:0000393,1.72e-10,39;CL:0000211,1.72e-10,39;CL:0002453,2.25e-09,8;CL:0002321,4.63e-09,70;CL:0000128,2.57e-07,6;CL:0000126,2.57e-07,6;CL:0000127,2.57e-07,6;CL:0000333,4.29e-07,10;CL:0000095,4.29e-07,10;CL:0000243,4.29e-07,10;CL:0000123,4.29e-07,10;CL:0000125,4.29e-07,10;CL:0000030,4.29e-07,10;CL:0000339,4.29e-07,10|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!7.87e-34!73;UBERON:0005743!7.87e-34!73;UBERON:0000073!1.73e-33!75;UBERON:0001016!1.73e-33!75;UBERON:0001049!4.91e-31!52;UBERON:0005068!4.91e-31!52;UBERON:0006241!4.91e-31!52;UBERON:0007135!4.91e-31!52;UBERON:0000955!1.45e-30!50;UBERON:0006238!1.45e-30!50;UBERON:0002346!2.39e-30!71;UBERON:0003075!2.39e-30!71;UBERON:0007284!2.39e-30!71;UBERON:0002616!8.40e-30!49;UBERON:0004121!2.73e-29!102;UBERON:0000924!2.73e-29!102;UBERON:0006601!2.73e-29!102;UBERON:0000033!3.21e-29!63;UBERON:0003056!1.20e-26!49;UBERON:0003080!6.58e-25!40;UBERON:0002780!2.42e-24!39;UBERON:0001890!2.42e-24!39;UBERON:0006240!2.42e-24!39;UBERON:0002020!3.23e-22!34;UBERON:0002791!5.84e-20!29;UBERON:0003528!5.84e-20!29;UBERON:0001893!5.84e-20!29;UBERON:0007811!4.10e-16!86;UBERON:0000956!6.31e-15!21;UBERON:0001869!6.31e-15!21;UBERON:0000203!6.31e-15!21;UBERON:0000153!2.40e-13!94;UBERON:0002619!9.50e-13!17;UBERON:0002021!8.33e-09!10;UBERON:0000411!8.33e-09!10;UBERON:0001950!8.33e-09!10;UBERON:0000025!1.09e-07!114;UBERON:0004111!8.74e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.05e-53,73;UBERON:0000073,6.16e-52,54;UBERON:0001016,9.41e-52,75;UBERON:0001049,1.19e-49,52;UBERON:0005068,1.19e-49,52;UBERON:0006241,1.19e-49,52;UBERON:0007135,1.19e-49,52;UBERON:0000955,1.52e-45,47;UBERON:0006238,1.52e-45,47;UBERON:0002616,2.78e-44,46;UBERON:0002346,5.40e-41,64;UBERON:0003075,5.40e-41,64;UBERON:0007284,5.40e-41,64;UBERON:0004121,5.10e-40,95;UBERON:0000924,5.10e-40,95;UBERON:0006601,5.10e-40,95;UBERON:0003080,2.87e-39,40;UBERON:0002780,2.60e-38,39;UBERON:0001890,2.60e-38,39;UBERON:0006240,2.60e-38,39;UBERON:0002020,1.93e-36,34;UBERON:0010371,7.80e-34,73;UBERON:0003056,2.45e-33,49;UBERON:0003528,1.29e-32,29;UBERON:0002791,1.29e-32,29;UBERON:0001893,1.29e-32,29;UBERON:0000956,4.26e-24,21;UBERON:0001869,4.26e-24,21;UBERON:0000203,4.26e-24,21;UBERON:0010314,2.20e-23,92;UBERON:0002619,2.03e-20,17;UBERON:0000025,6.61e-14,114;UBERON:0002021,9.04e-14,10;UBERON:0000411,9.04e-14,10;UBERON:0001950,9.04e-14,10;UBERON:0004111,5.12e-12,122;UBERON:0003076,4.55e-10,12;UBERON:0003057,4.55e-10,12;UBERON:0002420,1.97e-09,8;UBERON:0007245,1.97e-09,8;UBERON:0010009,1.97e-09,8;UBERON:0010011,1.97e-09,8;UBERON:0000454,1.97e-09,8;UBERON:0011216,4.29e-09,194;UBERON:0001954,4.16e-08,7;UBERON:0003022,4.16e-08,7;UBERON:0002421,4.16e-08,7;UBERON:0000349,4.16e-08,7;UBERON:0002600,4.16e-08,7;UBERON:0001894,7.32e-07,10;UBERON:0006222,7.32e-07,10|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38121212422995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.101376931219515,0.183546752161682,1.56478268869608,7.41285531693518,11.8630538676615,8.74934545834275,4.4795654920116,18.6878333674463,0,0,0,0,0.85960031981627,0,4.04632921719196,4.7609188134483,6.33831403506179,0.338844532069132,0.889294796111139,0,0,0,4.79360176829448,16.9056054341484,2.38486108309499,4.45519596494579,2.52389953621658,2.57085885963423,3.75476519617743,3.79721477566358,3.64212789869298,1.83843757322004,3.30347642998166,7.02280359468532,4.91540906419979,5.53922408466814,5.58074625974699,5.73004707612436,3.07101298901519,5.6276261003168,9.93188610549266,1.47314292736834,1.99320353118744,1.86399445825301,0.075726193333184,0.377857800533928,0,0,0,0,0,0,1.12355536105401,0.170430322578058,0,0,0.281686839553361,1.28326477414318,0,0,0,0,0,0.34255163915718,0,0.29688427812965,0.173485326766136,0.304465478312141,0.230615497256059,0.452167921657868,0.470354828542819,0,0.247194967734374,0.144599356919912,0,0,0.220841518460394,0,0,1.17112318804619,2.30391377494801,0,0,0,0,3.74476598512057,18.3000241127451,8.41884159156192,17.9039049798045,16.6215047264715,7.06479351502504,11.6813709408785,0.101839363850316,0,0,2.94618598241064,0.260240885925407,0.919608417733892,0.900310649026746,0.60281927134286,0.272145996605311,0.512454881139399,0.937017245597288,5.17406741478031,0,0.189106080167819,0.703804496655795,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0.23674473558521,0.196764231747404,0.154267112887378,0,0.268273401399619,0.233530684734339,0.16455984991348,0,0,0.292399974850665,0,0.268412837520744,15.7717461423095,9.05560588937703,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0,0,0.190225626112559,0.474529061544512,0.164698954724011,0,0,0.19496408711912,0.898819408654221,0.216138049874694,0,0.569003702859245,0.342745537829186,0,0,0,0,0.252946148497029,0.147610147979602,0.470996183524124,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.369506380333209,0,0.325929952884052,0,0.234690248288502,0.167506257441816,0,0,0.157635144106191,0,0,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,2.24770825982909,2.46144541843627,0,0,0.315508219416257,0,0.215423397732799,0.477937595905104,0,0,0.404810701674894,1.75353514746787,0,10.6036034419196,0.567760340833074,0.534196811001766,0.325773918707152,0.659880491890142,1.32745138339963,0,0,0,0.295301892880773,0,0.258428293168221,0,0,0,0,0,2.38307724027652,0.900305470156551,1.68166288917581,1.07168517515796,1.95074257006501,1.60531935841864,1.64549020602121,2.13125464380219,0,0.42366414172764,0,0.16488625294148,0,0.0603129249281559,0,0,0.291480836629851,4.45020724825223,0.170870880797853,0,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.108005340821801,0.209088296014469,0,0.134864346384821,0.247960367176008,0,0,0,0,0,0,0.583353565032143,0.258319646955462,0,0.234714477291508,0,0.104859344425711,0.483168241652012,0,0,0,0.102710957164827,0,0.179026695667481,0,0.240390899039938,0,0,0.0762068066549998,0,0.0974578807397524,0,0,0,0,0,0,0.772758376128762,0.375364950902364,0.915758121336325,0.643105137237198,0,35.0146142422581,30.8417908459809,17.1868654031819,28.1839219043648,17.1270629942661,14.3524840504043,21.6007200074178,25.2179873805563,15.406841905463,26.9235362110946,0.415149390336707,0.798049746802062,0.341467211508268,0.486213434136588,0.419226325255965,1.10306105070008,1.11123363900808,0.824140228955577,0.64183841918363,0.758091635291392,1.01391719956096,1.32038438970253,0.749132059759059,0.768301828858431,0.861532034334199,1.42888107384922,1.27472758539341,1.35036454324594,1.64834360321323,1.03039244094078,1.71434626192708,1.06485483695602,0.476872379894642,0.872078499793971,1.03520318456864,0.676916863133412,1.09756783723664,0.526139422875686,0.814824683075171,1.12228454331548,1.18635018124174,0.689531376628944,0.409231043169689,0.309873682371932,0.385813221962283,2.24829520144151,0.701794825336225,0.859484216193193,0.382576664137687,0,0|short_description=p3@Nat14}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=269854 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-336bp_to_uc009eyz.2_5end | |||
|cluster_id=chr7:4874199..4874215,+ | |||
|description=CAGE_peak_3_at_Nat14_5end | |||
|id=chr7:4874199..4874215,+ | |||
|ontology_enrichment_celltype=CL:0002319!2.42e-13!43;CL:0000221!2.62e-13!44;CL:0000133!2.62e-13!44;CL:0000117!4.07e-13!23;CL:0000337!4.07e-13!23;CL:0000055!2.60e-11!50;CL:0000540!4.16e-09!33;CL:0000047!4.16e-09!33;CL:0000031!4.16e-09!33;CL:0000404!4.16e-09!33;CL:0000393!6.56e-08!39;CL:0000211!6.56e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.86e-21,23;CL:0000337,4.86e-21,23;CL:0002319,1.04e-19,43;CL:0000221,5.03e-19,44;CL:0000133,5.03e-19,44;CL:0000540,1.06e-13,33;CL:0000047,1.06e-13,33;CL:0000031,1.06e-13,33;CL:0000404,1.06e-13,33;CL:0000393,1.72e-10,39;CL:0000211,1.72e-10,39;CL:0002453,2.25e-09,8;CL:0002321,4.63e-09,70;CL:0000128,2.57e-07,6;CL:0000126,2.57e-07,6;CL:0000127,2.57e-07,6;CL:0000333,4.29e-07,10;CL:0000095,4.29e-07,10;CL:0000243,4.29e-07,10;CL:0000123,4.29e-07,10;CL:0000125,4.29e-07,10;CL:0000030,4.29e-07,10;CL:0000339,4.29e-07,10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.87e-34!73;UBERON:0005743!7.87e-34!73;UBERON:0000073!1.73e-33!75;UBERON:0001016!1.73e-33!75;UBERON:0001049!4.91e-31!52;UBERON:0005068!4.91e-31!52;UBERON:0006241!4.91e-31!52;UBERON:0007135!4.91e-31!52;UBERON:0000955!1.45e-30!50;UBERON:0006238!1.45e-30!50;UBERON:0002346!2.39e-30!71;UBERON:0003075!2.39e-30!71;UBERON:0007284!2.39e-30!71;UBERON:0002616!8.40e-30!49;UBERON:0004121!2.73e-29!102;UBERON:0000924!2.73e-29!102;UBERON:0006601!2.73e-29!102;UBERON:0000033!3.21e-29!63;UBERON:0003056!1.20e-26!49;UBERON:0003080!6.58e-25!40;UBERON:0002780!2.42e-24!39;UBERON:0001890!2.42e-24!39;UBERON:0006240!2.42e-24!39;UBERON:0002020!3.23e-22!34;UBERON:0002791!5.84e-20!29;UBERON:0003528!5.84e-20!29;UBERON:0001893!5.84e-20!29;UBERON:0007811!4.10e-16!86;UBERON:0000956!6.31e-15!21;UBERON:0001869!6.31e-15!21;UBERON:0000203!6.31e-15!21;UBERON:0000153!2.40e-13!94;UBERON:0002619!9.50e-13!17;UBERON:0002021!8.33e-09!10;UBERON:0000411!8.33e-09!10;UBERON:0001950!8.33e-09!10;UBERON:0000025!1.09e-07!114;UBERON:0004111!8.74e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.05e-53,73;UBERON:0000073,6.16e-52,54;UBERON:0001016,9.41e-52,75;UBERON:0001049,1.19e-49,52;UBERON:0005068,1.19e-49,52;UBERON:0006241,1.19e-49,52;UBERON:0007135,1.19e-49,52;UBERON:0000955,1.52e-45,47;UBERON:0006238,1.52e-45,47;UBERON:0002616,2.78e-44,46;UBERON:0002346,5.40e-41,64;UBERON:0003075,5.40e-41,64;UBERON:0007284,5.40e-41,64;UBERON:0004121,5.10e-40,95;UBERON:0000924,5.10e-40,95;UBERON:0006601,5.10e-40,95;UBERON:0003080,2.87e-39,40;UBERON:0002780,2.60e-38,39;UBERON:0001890,2.60e-38,39;UBERON:0006240,2.60e-38,39;UBERON:0002020,1.93e-36,34;UBERON:0010371,7.80e-34,73;UBERON:0003056,2.45e-33,49;UBERON:0003528,1.29e-32,29;UBERON:0002791,1.29e-32,29;UBERON:0001893,1.29e-32,29;UBERON:0000956,4.26e-24,21;UBERON:0001869,4.26e-24,21;UBERON:0000203,4.26e-24,21;UBERON:0010314,2.20e-23,92;UBERON:0002619,2.03e-20,17;UBERON:0000025,6.61e-14,114;UBERON:0002021,9.04e-14,10;UBERON:0000411,9.04e-14,10;UBERON:0001950,9.04e-14,10;UBERON:0004111,5.12e-12,122;UBERON:0003076,4.55e-10,12;UBERON:0003057,4.55e-10,12;UBERON:0002420,1.97e-09,8;UBERON:0007245,1.97e-09,8;UBERON:0010009,1.97e-09,8;UBERON:0010011,1.97e-09,8;UBERON:0000454,1.97e-09,8;UBERON:0011216,4.29e-09,194;UBERON:0001954,4.16e-08,7;UBERON:0003022,4.16e-08,7;UBERON:0002421,4.16e-08,7;UBERON:0000349,4.16e-08,7;UBERON:0002600,4.16e-08,7;UBERON:0001894,7.32e-07,10;UBERON:0006222,7.32e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38121212422995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.101376931219515,0.183546752161682,1.56478268869608,7.41285531693518,11.8630538676615,8.74934545834275,4.4795654920116,18.6878333674463,0,0,0,0,0.85960031981627,0,4.04632921719196,4.7609188134483,6.33831403506179,0.338844532069132,0.889294796111139,0,0,0,4.79360176829448,16.9056054341484,2.38486108309499,4.45519596494579,2.52389953621658,2.57085885963423,3.75476519617743,3.79721477566358,3.64212789869298,1.83843757322004,3.30347642998166,7.02280359468532,4.91540906419979,5.53922408466814,5.58074625974699,5.73004707612436,3.07101298901519,5.6276261003168,9.93188610549266,1.47314292736834,1.99320353118744,1.86399445825301,0.075726193333184,0.377857800533928,0,0,0,0,0,0,1.12355536105401,0.170430322578058,0,0,0.281686839553361,1.28326477414318,0,0,0,0,0,0.34255163915718,0,0.29688427812965,0.173485326766136,0.304465478312141,0.230615497256059,0.452167921657868,0.470354828542819,0,0.247194967734374,0.144599356919912,0,0,0.220841518460394,0,0,1.17112318804619,2.30391377494801,0,0,0,0,3.74476598512057,18.3000241127451,8.41884159156192,17.9039049798045,16.6215047264715,7.06479351502504,11.6813709408785,0.101839363850316,0,0,2.94618598241064,0.260240885925407,0.919608417733892,0.900310649026746,0.60281927134286,0.272145996605311,0.512454881139399,0.937017245597288,5.17406741478031,0,0.189106080167819,0.703804496655795,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0.23674473558521,0.196764231747404,0.154267112887378,0,0.268273401399619,0.233530684734339,0.16455984991348,0,0,0.292399974850665,0,0.268412837520744,15.7717461423095,9.05560588937703,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0,0,0.190225626112559,0.474529061544512,0.164698954724011,0,0,0.19496408711912,0.898819408654221,0.216138049874694,0,0.569003702859245,0.342745537829186,0,0,0,0,0.252946148497029,0.147610147979602,0.470996183524124,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.369506380333209,0,0.325929952884052,0,0.234690248288502,0.167506257441816,0,0,0.157635144106191,0,0,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,2.24770825982909,2.46144541843627,0,0,0.315508219416257,0,0.215423397732799,0.477937595905104,0,0,0.404810701674894,1.75353514746787,0,10.6036034419196,0.567760340833074,0.534196811001766,0.325773918707152,0.659880491890142,1.32745138339963,0,0,0,0.295301892880773,0,0.258428293168221,0,0,0,0,0,2.38307724027652,0.900305470156551,1.68166288917581,1.07168517515796,1.95074257006501,1.60531935841864,1.64549020602121,2.13125464380219,0,0.42366414172764,0,0.16488625294148,0,0.0603129249281559,0,0,0.291480836629851,4.45020724825223,0.170870880797853,0,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.108005340821801,0.209088296014469,0,0.134864346384821,0.247960367176008,0,0,0,0,0,0,0.583353565032143,0.258319646955462,0,0.234714477291508,0,0.104859344425711,0.483168241652012,0,0,0,0.102710957164827,0,0.179026695667481,0,0.240390899039938,0,0,0.0762068066549998,0,0.0974578807397524,0,0,0,0,0,0,0.772758376128762,0.375364950902364,0.915758121336325,0.643105137237198,0,35.0146142422581,30.8417908459809,17.1868654031819,28.1839219043648,17.1270629942661,14.3524840504043,21.6007200074178,25.2179873805563,15.406841905463,26.9235362110946,0.415149390336707,0.798049746802062,0.341467211508268,0.486213434136588,0.419226325255965,1.10306105070008,1.11123363900808,0.824140228955577,0.64183841918363,0.758091635291392,1.01391719956096,1.32038438970253,0.749132059759059,0.768301828858431,0.861532034334199,1.42888107384922,1.27472758539341,1.35036454324594,1.64834360321323,1.03039244094078,1.71434626192708,1.06485483695602,0.476872379894642,0.872078499793971,1.03520318456864,0.676916863133412,1.09756783723664,0.526139422875686,0.814824683075171,1.12228454331548,1.18635018124174,0.689531376628944,0.409231043169689,0.309873682371932,0.385813221962283,2.24829520144151,0.701794825336225,0.859484216193193,0.382576664137687,0,0 | |||
|short_description=p3@Nat14 | |||
}} |
Latest revision as of 18:06, 26 September 2015
Short description: | p3@Nat14 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Nat14_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | -336bp_to_uc009eyz.2_5end |
EntrezGene: | Nat14 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.86e-21 | 23 |
neuroblast (sensu Vertebrata) | 4.86e-21 | 23 |
neural cell | 1.04e-19 | 43 |
ectodermal cell | 5.03e-19 | 44 |
neurectodermal cell | 5.03e-19 | 44 |
neuron | 1.06e-13 | 33 |
neuronal stem cell | 1.06e-13 | 33 |
neuroblast | 1.06e-13 | 33 |
electrically signaling cell | 1.06e-13 | 33 |
electrically responsive cell | 1.72e-10 | 39 |
electrically active cell | 1.72e-10 | 39 |
oligodendrocyte precursor cell | 2.25e-09 | 8 |
embryonic cell | 4.63e-09 | 70 |
oligodendrocyte | 2.57e-07 | 6 |
macroglial cell | 2.57e-07 | 6 |
astrocyte | 2.57e-07 | 6 |
migratory neural crest cell | 4.29e-07 | 10 |
neuron associated cell | 4.29e-07 | 10 |
glial cell (sensu Vertebrata) | 4.29e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 4.29e-07 | 10 |
glial cell | 4.29e-07 | 10 |
glioblast | 4.29e-07 | 10 |
glioblast (sensu Vertebrata) | 4.29e-07 | 10 |