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FFCP PHASE1:Mm9::chr11:5965740..5965758,-: Difference between revisions

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(Created page with "{{FFCP |id=chr11:5965740..5965758,- |short_description=p4@Camk2b |description=CAGE_peak_4_at_Camk2b_5end |association_with_transcript=0bp_to_ENSMUST00000002817,ENSMUST0000...")
 
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{{FFCP
{{FFCP
|id=chr11:5965740..5965758,-
|DHSsupport=NA
|short_description=p4@Camk2b
|DPIdataset=NA
|description=CAGE_peak_4_at_Camk2b_5end
|association_with_transcript=0bp_to_ENSMUST00000002817,ENSMUST00000090443,ENSMUST00000109813,NM_001174053,NM_001174054,NM_007595,uc007hxr.2,uc007hxs.2,uc007hxt.2,uc007hxw.1_5end
|EntrezGene=12323
|EntrezGene=12323
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q5SVJ1,Q68EG2,P28652,Q8BL41,Q5SVI2
|UniProt=Q5SVJ1,Q68EG2,P28652,Q8BL41,Q5SVI2
|association_with_transcript=0bp_to_ENSMUST00000002817,ENSMUST00000090443,ENSMUST00000109813,NM_001174053,NM_001174054,NM_007595,uc007hxr.2,uc007hxs.2,uc007hxt.2,uc007hxw.1_5end
|cluster_id=chr11:5965740..5965758,-
|description=CAGE_peak_4_at_Camk2b_5end
|id=chr11:5965740..5965758,-
|ontology_enrichment_celltype=CL:0000117!7.82e-15!23;CL:0000337!7.82e-15!23;CL:0000540!6.33e-11!33;CL:0000047!6.33e-11!33;CL:0000031!6.33e-11!33;CL:0000404!6.33e-11!33;CL:0002319!3.14e-08!43;CL:0000221!8.94e-08!44;CL:0000133!8.94e-08!44;CL:0000393!1.67e-07!39;CL:0000211!1.67e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000117,2.49e-20,23;CL:0000337,2.49e-20,23;CL:0000540,8.79e-13,33;CL:0000047,8.79e-13,33;CL:0000031,8.79e-13,33;CL:0000404,8.79e-13,33;CL:0002319,1.04e-09,43;CL:0000393,1.26e-09,39;CL:0000211,1.26e-09,39;CL:0000221,2.63e-09,44;CL:0000133,2.63e-09,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!1.22e-24!71;UBERON:0003075!1.22e-24!71;UBERON:0007284!1.22e-24!71;UBERON:0001017!1.77e-24!73;UBERON:0005743!1.77e-24!73;UBERON:0001049!3.31e-23!52;UBERON:0005068!3.31e-23!52;UBERON:0006241!3.31e-23!52;UBERON:0007135!3.31e-23!52;UBERON:0000073!4.61e-23!75;UBERON:0001016!4.61e-23!75;UBERON:0004121!2.06e-22!102;UBERON:0000924!2.06e-22!102;UBERON:0006601!2.06e-22!102;UBERON:0000955!2.64e-22!50;UBERON:0006238!2.64e-22!50;UBERON:0002616!1.91e-21!49;UBERON:0002020!3.56e-21!34;UBERON:0000033!1.76e-20!63;UBERON:0002791!6.88e-18!29;UBERON:0003528!6.88e-18!29;UBERON:0001893!6.88e-18!29;UBERON:0003080!2.17e-17!40;UBERON:0003056!2.55e-17!49;UBERON:0002780!1.09e-16!39;UBERON:0001890!1.09e-16!39;UBERON:0006240!1.09e-16!39;UBERON:0000956!1.14e-12!21;UBERON:0001869!1.14e-12!21;UBERON:0000203!1.14e-12!21;UBERON:0002619!1.95e-10!17;UBERON:0007811!1.77e-09!86;UBERON:0002021!4.29e-09!10;UBERON:0000411!4.29e-09!10;UBERON:0001950!4.29e-09!10;UBERON:0000153!1.75e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.74e-30,54;UBERON:0002020,7.91e-29,34;UBERON:0001017,7.91e-29,73;UBERON:0001049,3.03e-28,52;UBERON:0005068,3.03e-28,52;UBERON:0006241,3.03e-28,52;UBERON:0007135,3.03e-28,52;UBERON:0001016,1.42e-27,75;UBERON:0002346,1.78e-24,64;UBERON:0003075,1.78e-24,64;UBERON:0007284,1.78e-24,64;UBERON:0003528,3.54e-24,29;UBERON:0002791,3.54e-24,29;UBERON:0001893,3.54e-24,29;UBERON:0000955,6.39e-24,47;UBERON:0006238,6.39e-24,47;UBERON:0002616,8.61e-23,46;UBERON:0004121,1.23e-21,95;UBERON:0000924,1.23e-21,95;UBERON:0006601,1.23e-21,95;UBERON:0003080,1.19e-20,40;UBERON:0002780,1.06e-19,39;UBERON:0001890,1.06e-19,39;UBERON:0006240,1.06e-19,39;UBERON:0010371,1.64e-19,73;UBERON:0003056,7.15e-18,49;UBERON:0000956,8.39e-17,21;UBERON:0001869,8.39e-17,21;UBERON:0000203,8.39e-17,21;UBERON:0002619,1.19e-13,17;UBERON:0010314,3.69e-13,92;UBERON:0002021,3.27e-12,10;UBERON:0000411,3.27e-12,10;UBERON:0001950,3.27e-12,10;UBERON:0002420,1.70e-08,8;UBERON:0007245,1.70e-08,8;UBERON:0010009,1.70e-08,8;UBERON:0010011,1.70e-08,8;UBERON:0000454,1.70e-08,8;UBERON:0003076,4.96e-08,12;UBERON:0003057,4.96e-08,12
|phase1_expression=0,0,0,0,0,1.34303417529512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.33720779770456,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577703239502549,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,0,0,0,0,0,0,0,0,6.27181028664753,7.40587370980846,5.70448263155561,0,0,0,0,0,1.19840044207362,4.2264013585371,2.59224030771194,5.8052553482627,3.57552434297349,11.4260393761521,11.7060326704355,3.91970557487853,2.77951865952885,5.51531271966013,19.82085857989,17.8762273319263,14.2854075928306,7.25374582516066,5.39777097254217,4.68822033501084,13.4007839520663,9.56696437053856,12.9878510610289,8.2496003932627,9.96601765593721,6.33758115806022,0,0,0,0,0,0,0,0,1.68533304158102,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0.742210695324124,0.173485326766136,0.304465478312141,0.230615497256059,0.301445281105245,0.940709657085638,0.376999773989026,0,0,2.65383165584962,2.58826959915855,2.42925670306433,0.484875253135222,0,18.737971008739,17.8029700791437,0,0,0,0,16.926342252745,30.652540388848,12.4397808591736,19.2944995413427,21.7358138730781,11.6361304953354,19.7934340942664,0,0.497627882440372,0.252722758433675,1.26265113531884,0,0.229902104433473,0.360124259610698,0,0.884474488967262,1.15302348256365,0.937017245597288,2.58703370739016,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0.36012412292203,0,0,0.154267112887378,0,0,0,0.16455984991348,0,0.0810688095458557,0,0,0.268412837520744,41.6374098156972,8.84979666461846,0,0,0,0,0.257734922644187,0.201683524623343,0.22237804384487,0,0,0.164698954724011,0,0.198956472041151,0.38992817423824,0,0,0.199141273254367,0,0.342745537829186,0,0.203651327845314,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0.241177159752417,0.50925170356284,1.43848068725405,0,0.274561413188081,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,8.50918126935297,9.96299336033727,0,4.29200576247434,0.315508219416257,1.56175497718655,0.430846795465598,0,0,0.283076530788832,0,0.876767573733936,0,42.7357350841003,0.141940085208269,0,0.325773918707152,0,0,0.485561272309963,0,0.188605079755898,1.18120757152309,0.922305443831782,0,0.363533729477506,0.356497378384721,0.632073515871632,0,0,1.02131881726136,0,0,0,0.177340233642274,0.713475270408282,0.329098041204242,0.608929898229199,0,0,0,0.65954501176592,0.161464426695906,0.422190474497091,0.238744688006273,0,0,9.27126510052548,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0.218362563746178,0,0.165306911450672,0,0.129614973291793,0,0,0,0,0,0,0,0,0.13020438484395,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,2.0405734525369,0,0,0,0,0,0,0,0,21.4605700194485,20.714635642823,18.9055519435001,24.4031518928036,18.4972280338073,17.3740596399631,20.2506750069542,22.0657389579868,20.8445508132734,24.3347346523355,0,0,0.341467211508268,1.70174701947806,0.628839487883947,2.20612210140017,1.11123363900808,1.85431551515005,1.92551525755089,2.27427490587418,1.52087579934144,2.26351609663291,1.31098110457835,1.28050304809739,1.7230640686684,1.90517476513229,1.97003354106254,0.964546102318525,1.64834360321323,1.91358596174717,0.685738504770831,1.4198064492747,2.62279808942053,2.18019624948493,1.50575008664529,2.03075058940024,3.10977553883713,1.8414879800649,1.49384525230448,1.12228454331548,1.30498519936592,2.26560309463796,1.63692417267876,2.16911577660352,1.92906610981141,2.99772693525535,2.10538447600868,1.93383948643468,0.57386499620653,2.8676884485537,3.2461496986859
|phase1_expression=0,0,0,0,0,1.34303417529512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.33720779770456,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577703239502549,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,0,0,0,0,0,0,0,0,6.27181028664753,7.40587370980846,5.70448263155561,0,0,0,0,0,1.19840044207362,4.2264013585371,2.59224030771194,5.8052553482627,3.57552434297349,11.4260393761521,11.7060326704355,3.91970557487853,2.77951865952885,5.51531271966013,19.82085857989,17.8762273319263,14.2854075928306,7.25374582516066,5.39777097254217,4.68822033501084,13.4007839520663,9.56696437053856,12.9878510610289,8.2496003932627,9.96601765593721,6.33758115806022,0,0,0,0,0,0,0,0,1.68533304158102,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0.742210695324124,0.173485326766136,0.304465478312141,0.230615497256059,0.301445281105245,0.940709657085638,0.376999773989026,0,0,2.65383165584962,2.58826959915855,2.42925670306433,0.484875253135222,0,18.737971008739,17.8029700791437,0,0,0,0,16.926342252745,30.652540388848,12.4397808591736,19.2944995413427,21.7358138730781,11.6361304953354,19.7934340942664,0,0.497627882440372,0.252722758433675,1.26265113531884,0,0.229902104433473,0.360124259610698,0,0.884474488967262,1.15302348256365,0.937017245597288,2.58703370739016,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0.36012412292203,0,0,0.154267112887378,0,0,0,0.16455984991348,0,0.0810688095458557,0,0,0.268412837520744,41.6374098156972,8.84979666461846,0,0,0,0,0.257734922644187,0.201683524623343,0.22237804384487,0,0,0.164698954724011,0,0.198956472041151,0.38992817423824,0,0,0.199141273254367,0,0.342745537829186,0,0.203651327845314,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0.241177159752417,0.50925170356284,1.43848068725405,0,0.274561413188081,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,8.50918126935297,9.96299336033727,0,4.29200576247434,0.315508219416257,1.56175497718655,0.430846795465598,0,0,0.283076530788832,0,0.876767573733936,0,42.7357350841003,0.141940085208269,0,0.325773918707152,0,0,0.485561272309963,0,0.188605079755898,1.18120757152309,0.922305443831782,0,0.363533729477506,0.356497378384721,0.632073515871632,0,0,1.02131881726136,0,0,0,0.177340233642274,0.713475270408282,0.329098041204242,0.608929898229199,0,0,0,0.65954501176592,0.161464426695906,0.422190474497091,0.238744688006273,0,0,9.27126510052548,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0.218362563746178,0,0.165306911450672,0,0.129614973291793,0,0,0,0,0,0,0,0,0.13020438484395,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,2.0405734525369,0,0,0,0,0,0,0,0,21.4605700194485,20.714635642823,18.9055519435001,24.4031518928036,18.4972280338073,17.3740596399631,20.2506750069542,22.0657389579868,20.8445508132734,24.3347346523355,0,0,0.341467211508268,1.70174701947806,0.628839487883947,2.20612210140017,1.11123363900808,1.85431551515005,1.92551525755089,2.27427490587418,1.52087579934144,2.26351609663291,1.31098110457835,1.28050304809739,1.7230640686684,1.90517476513229,1.97003354106254,0.964546102318525,1.64834360321323,1.91358596174717,0.685738504770831,1.4198064492747,2.62279808942053,2.18019624948493,1.50575008664529,2.03075058940024,3.10977553883713,1.8414879800649,1.49384525230448,1.12228454331548,1.30498519936592,2.26560309463796,1.63692417267876,2.16911577660352,1.92906610981141,2.99772693525535,2.10538447600868,1.93383948643468,0.57386499620653,2.8676884485537,3.2461496986859
|short_description=p4@Camk2b
}}
}}

Latest revision as of 19:42, 1 October 2015

Short description:p4@Camk2b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Camk2b_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000002817, ENSMUST00000090443, ENSMUST00000109813, NM_001174053, NM_001174054, NM_007595, uc007hxr.2, uc007hxs.2, uc007hxt.2, uc007hxw.1_5end
EntrezGene:Camk2b
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Camk2b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C36.27
Mouse Granule cells, donor2.CNhs12357.11731-123E37.41
Mouse Granule cells, donor3.CNhs12108.11636-122C75.70
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E84.23
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.59
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.81
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.58
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F111.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D511.71
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.92
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.78
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D319.82
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F317.88
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D714.29
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D47.25
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.40
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.69
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E413.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E59.57
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I612.99
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D68.25
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F69.97
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.34
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.69
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.94
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F52.59
bone (os femoris), neonate N16.CNhs11225.1525-43A62.43
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B218.74
cerebellum, neonate N30.CNhs11135.1395-42I217.80
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A416.93
corpus striatum, adult.CNhs10487.19-21D830.65
corpus striatum, neonate N00.CNhs11226.630-43F112.44
cortex, adult.CNhs10473.12-14D519.29
cortex, neonate N30.CNhs11107.1392-42F221.74
diencephalon, adult.CNhs10482.20-12F211.64
diencephalon, neonate N30.CNhs11201.1388-42B219.79
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.88
eyeball, neonate N01.CNhs11140.1532-43E71.15
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A22.59
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E841.64
hippocampus, neonate N00.CNhs11228.627-43G18.85
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C28.51
medulla oblongata, neonate N30.CNhs11200.1396-42A39.96
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C24.29
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I942.74
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.42
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C99.27
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B42.04
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A121.46
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A220.71
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A318.91
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D724.40
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A418.50
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A517.37
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A620.25
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A722.07
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A820.84
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A924.33
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F22.21
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.26
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.72
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.17
whole body, embryo E17.5.CNhs10513.490-9F91.93
whole body, embryo E17.CNhs10517.475-3I53.00
whole body, embryo E18.CNhs10516.493-3B32.11
whole body, neonate N00.CNhs10525.657-19C21.93
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D12.87
whole body, neonate N10.CNhs10518.761-6B43.25





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.49e-2023
neuroblast (sensu Vertebrata)2.49e-2023
neuron8.79e-1333
neuronal stem cell8.79e-1333
neuroblast8.79e-1333
electrically signaling cell8.79e-1333
neural cell1.04e-0943
electrically responsive cell1.26e-0939
electrically active cell1.26e-0939
ectodermal cell2.63e-0944
neurectodermal cell2.63e-0944

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.74e-3054
gray matter7.91e-2934
central nervous system7.91e-2973
neural tube3.03e-2852
neural rod3.03e-2852
future spinal cord3.03e-2852
neural keel3.03e-2852
nervous system1.42e-2775
neurectoderm1.78e-2464
neural plate1.78e-2464
presumptive neural plate1.78e-2464
brain grey matter3.54e-2429
regional part of telencephalon3.54e-2429
telencephalon3.54e-2429
brain6.39e-2447
future brain6.39e-2447
regional part of brain8.61e-2346
ectoderm-derived structure1.23e-2195
ectoderm1.23e-2195
presumptive ectoderm1.23e-2195
anterior neural tube1.19e-2040
regional part of forebrain1.06e-1939
forebrain1.06e-1939
future forebrain1.06e-1939
ecto-epithelium1.64e-1973
pre-chordal neural plate7.15e-1849
cerebral cortex8.39e-1721
cerebral hemisphere8.39e-1721
pallium8.39e-1721
regional part of cerebral cortex1.19e-1317
structure with developmental contribution from neural crest3.69e-1392
occipital lobe3.27e-1210
visual cortex3.27e-1210
neocortex3.27e-1210
basal ganglion1.70e-088
nuclear complex of neuraxis1.70e-088
aggregate regional part of brain1.70e-088
collection of basal ganglia1.70e-088
cerebral subcortex1.70e-088
posterior neural tube4.96e-0812
chordal neural plate4.96e-0812
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