Personal tools

FFCP PHASE1:Mm9::chr13:58909245..58909263,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr13:58909245..58909263,+ |short_description=p5@Ntrk2 |description=CAGE_peak_5_at_Ntrk2_5end |association_with_transcript=0bp_to_ENSMUST00000079828,ENSMUST0000...")
 
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr13:58909245..58909263,+
|DHSsupport=NA
|short_description=p5@Ntrk2
|DPIdataset=NA
|description=CAGE_peak_5_at_Ntrk2_5end
|association_with_transcript=0bp_to_ENSMUST00000079828,ENSMUST00000109839,ENSMUST00000109840_5end
|EntrezGene=18212
|EntrezGene=18212
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=P15209
|UniProt=P15209
|association_with_transcript=0bp_to_ENSMUST00000079828,ENSMUST00000109839,ENSMUST00000109840_5end
|cluster_id=chr13:58909245..58909263,+
|description=CAGE_peak_5_at_Ntrk2_5end
|id=chr13:58909245..58909263,+
|ontology_enrichment_celltype=CL:0000117!1.68e-10!23;CL:0000337!1.68e-10!23;CL:0000221!1.73e-09!44;CL:0000133!1.73e-09!44;CL:0002319!3.03e-09!43
|ontology_enrichment_celltype_v019_2=CL:0000117,2.52e-16,23;CL:0000337,2.52e-16,23;CL:0002319,1.90e-14,43;CL:0000221,6.62e-14,44;CL:0000133,6.62e-14,44;CL:0000540,2.32e-09,33;CL:0000047,2.32e-09,33;CL:0000031,2.32e-09,33;CL:0000404,2.32e-09,33;CL:0000393,5.42e-07,39;CL:0000211,5.42e-07,39;CL:0002453,8.81e-07,8
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!1.12e-28!52;UBERON:0005068!1.12e-28!52;UBERON:0006241!1.12e-28!52;UBERON:0007135!1.12e-28!52;UBERON:0000033!1.37e-28!63;UBERON:0004121!1.64e-28!102;UBERON:0000924!1.64e-28!102;UBERON:0006601!1.64e-28!102;UBERON:0000073!1.82e-28!75;UBERON:0001016!1.82e-28!75;UBERON:0000955!7.91e-28!50;UBERON:0006238!7.91e-28!50;UBERON:0001017!1.14e-27!73;UBERON:0005743!1.14e-27!73;UBERON:0002616!4.42e-27!49;UBERON:0002346!4.20e-26!71;UBERON:0003075!4.20e-26!71;UBERON:0007284!4.20e-26!71;UBERON:0003056!4.67e-23!49;UBERON:0003080!6.44e-22!40;UBERON:0002780!3.16e-21!39;UBERON:0001890!3.16e-21!39;UBERON:0006240!3.16e-21!39;UBERON:0002020!2.14e-19!34;UBERON:0002791!1.62e-16!29;UBERON:0003528!1.62e-16!29;UBERON:0001893!1.62e-16!29;UBERON:0007811!4.59e-15!86;UBERON:0000153!4.72e-14!94;UBERON:0000956!3.38e-12!21;UBERON:0001869!3.38e-12!21;UBERON:0000203!3.38e-12!21;UBERON:0002619!1.28e-10!17;UBERON:0002021!7.09e-09!10;UBERON:0000411!7.09e-09!10;UBERON:0001950!7.09e-09!10;UBERON:0004111!8.22e-08!122;UBERON:0000025!1.46e-07!114;UBERON:0003076!3.43e-07!12;UBERON:0003057!3.43e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.57e-45,54;UBERON:0001016,2.34e-44,75;UBERON:0001017,2.83e-44,73;UBERON:0001049,8.68e-43,52;UBERON:0005068,8.68e-43,52;UBERON:0006241,8.68e-43,52;UBERON:0007135,8.68e-43,52;UBERON:0000955,5.68e-38,47;UBERON:0006238,5.68e-38,47;UBERON:0002346,2.45e-37,64;UBERON:0003075,2.45e-37,64;UBERON:0007284,2.45e-37,64;UBERON:0004121,6.74e-37,95;UBERON:0000924,6.74e-37,95;UBERON:0006601,6.74e-37,95;UBERON:0002616,8.23e-37,46;UBERON:0003080,2.21e-33,40;UBERON:0002780,2.78e-32,39;UBERON:0001890,2.78e-32,39;UBERON:0006240,2.78e-32,39;UBERON:0010371,8.85e-32,73;UBERON:0002020,1.26e-30,34;UBERON:0003056,1.70e-30,49;UBERON:0003528,5.19e-26,29;UBERON:0002791,5.19e-26,29;UBERON:0001893,5.19e-26,29;UBERON:0010314,1.16e-20,92;UBERON:0000956,4.20e-19,21;UBERON:0001869,4.20e-19,21;UBERON:0000203,4.20e-19,21;UBERON:0002619,1.34e-16,17;UBERON:0002021,3.23e-13,10;UBERON:0000411,3.23e-13,10;UBERON:0001950,3.23e-13,10;UBERON:0000025,6.11e-13,114;UBERON:0004111,1.16e-11,122;UBERON:0003076,2.66e-09,12;UBERON:0003057,2.66e-09,12;UBERON:0002420,5.81e-08,8;UBERON:0007245,5.81e-08,8;UBERON:0010009,5.81e-08,8;UBERON:0010011,5.81e-08,8;UBERON:0000454,5.81e-08,8;UBERON:0011216,1.49e-07,194;UBERON:0001894,3.96e-07,10;UBERON:0006222,3.96e-07,10
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.40173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,3.48840250208714,6.59058548203415,9.91592485278845,3.49966054063406,8.62515386189829,0,0,0,0,0,0,2.42779753031517,1.05798195854407,1.90149421051854,0.338844532069132,0,0,0,0,14.3808053048834,22.6688800139717,1.45165457231869,1.08004750665353,1.47227472945967,3.14216082844184,5.52171352379034,2.20483438586917,1.43768206527355,0,25.3266526298594,9.19348834213351,9.06278546211836,1.18697658957174,2.01272815925301,2.6045668527838,5.862842979029,10.6924895906019,9.16789486660861,8.2496003932627,6.97621235915604,3.16879057903011,2.87759534666099,0.755715601067855,0.579728977403356,0,0,0,0,0,0.702222100658759,0,0.259786004602869,0,0.985903938436763,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0.742210695324124,0,0,0.461230994512117,0.301445281105245,0.705532242814229,0.502666365318702,0,1.87979163995885,0,0.485300549842228,0.220841518460394,0,0,4.09893115816166,1.8850203613211,0,0,0,0,10.1857634795279,40.2600530480391,5.27748278874031,40.5010666048004,39.1244649715406,11.6361304953354,13.6282660976916,1.83310854930569,0.248813941220186,0,1.26265113531884,0.390361328888111,1.14951052216736,1.0803727788321,0.753524089178575,0.476255494059295,0.384341160854549,0.562210347358373,2.06962696591213,0,0,0,0.876782929710299,0.556094498451196,0.696504333044333,0.205782136407943,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0.154267112887378,0,0.268273401399619,0,0,0,0,0,0.219550115291051,0,19.3466752678997,3.60166143327496,0,0,0,0,0,0,0,0,0,0,0.502670417600539,0,0.38992817423824,0,0,0.199141273254367,0.189667900953082,0,0,0,0.193952487167626,0.140271639780637,0.189709611372772,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0.505157755894224,0.179397413521912,0.964887042726734,0.369506380333209,0.568474235311454,0.162964976442026,0.169745085775188,0,0,0,0,0.788175720530955,0,0.159454768657487,0.81931657357869,0.345369963731791,0.578596234326046,0,0,0,1.10374698521893,6.26147300952389,5.86058432961016,0,0.252470927204373,0,0,0.215423397732799,0,0,0,0,0,0,12.2102100240287,0.567760340833074,1.6025904330053,2.60619134965722,1.64970122972535,1.32745138339963,0.485561272309963,0.302323556964751,0.754420319023592,0.295301892880773,0,0.516856586336442,0,1.06949213515416,0.316036757935816,0,2.06271086496374,6.46835250932197,0.720244376125241,1.16422815404479,2.35770738534752,1.59606210278046,2.67553226403106,2.46823530903181,3.34911444026059,0.704015124191131,0,0.220528398054962,0.32977250588296,0.484393280087717,0.603129249281559,0.358117032009409,0.492422699235184,0,4.45020724825223,0,2.06386867963222,1.48155621895769,0,0.136694227721025,0,0,0,0,0,0.158167996790568,0.406638934253697,0,0.209088296014469,0,0,0.0826534557253359,0,0,0,0,0,0,0.194451188344048,0,0.168956125490778,0.938857909166032,0.39061315453185,0.838874755405687,0.241584120826006,0,0.316011120628178,1.21635129174099,0.205421914329655,0.389762468933385,0,0,0,0,0,0,0,0,0,0,0.906921534460845,0,0,0,0.386379188064381,0.93841237725591,0.73260649706906,1.07184189539533,0,46.3096510945995,40.5086208126316,40.1026859407578,39.5262319390481,41.1049511862385,36.2589070747056,51.9767325178491,55.3895079965791,84.2844880710621,67.3088405277366,0.103787347584177,0,1.02440163452481,0,0.419226325255965,0.735374033800057,1.33348036680969,1.03017528619447,0.962757628775446,0.505394423527595,0.760437899670719,0.754505365544305,0.842773567228942,0.832326981263301,0.804096565378586,0.952587382566147,0.347652977834566,0.77163688185482,0.824171801606613,1.03039244094078,0.685738504770831,0.354951612318675,0.715308569841963,0.581385666529314,0.470546902076653,1.09998990259179,1.46342378298218,0.263069711437843,1.08643291076689,0,0.355905054372522,0.886540341380071,1.22769312950907,0.464810523557898,0.192906610981141,2.74791635731741,1.16965804222704,1.71896843238639,2.10417165275728,1.54413993383661,0.463735671240843
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.40173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,3.48840250208714,6.59058548203415,9.91592485278845,3.49966054063406,8.62515386189829,0,0,0,0,0,0,2.42779753031517,1.05798195854407,1.90149421051854,0.338844532069132,0,0,0,0,14.3808053048834,22.6688800139717,1.45165457231869,1.08004750665353,1.47227472945967,3.14216082844184,5.52171352379034,2.20483438586917,1.43768206527355,0,25.3266526298594,9.19348834213351,9.06278546211836,1.18697658957174,2.01272815925301,2.6045668527838,5.862842979029,10.6924895906019,9.16789486660861,8.2496003932627,6.97621235915604,3.16879057903011,2.87759534666099,0.755715601067855,0.579728977403356,0,0,0,0,0,0.702222100658759,0,0.259786004602869,0,0.985903938436763,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0.742210695324124,0,0,0.461230994512117,0.301445281105245,0.705532242814229,0.502666365318702,0,1.87979163995885,0,0.485300549842228,0.220841518460394,0,0,4.09893115816166,1.8850203613211,0,0,0,0,10.1857634795279,40.2600530480391,5.27748278874031,40.5010666048004,39.1244649715406,11.6361304953354,13.6282660976916,1.83310854930569,0.248813941220186,0,1.26265113531884,0.390361328888111,1.14951052216736,1.0803727788321,0.753524089178575,0.476255494059295,0.384341160854549,0.562210347358373,2.06962696591213,0,0,0,0.876782929710299,0.556094498451196,0.696504333044333,0.205782136407943,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0.154267112887378,0,0.268273401399619,0,0,0,0,0,0.219550115291051,0,19.3466752678997,3.60166143327496,0,0,0,0,0,0,0,0,0,0,0.502670417600539,0,0.38992817423824,0,0,0.199141273254367,0.189667900953082,0,0,0,0.193952487167626,0.140271639780637,0.189709611372772,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0.505157755894224,0.179397413521912,0.964887042726734,0.369506380333209,0.568474235311454,0.162964976442026,0.169745085775188,0,0,0,0,0.788175720530955,0,0.159454768657487,0.81931657357869,0.345369963731791,0.578596234326046,0,0,0,1.10374698521893,6.26147300952389,5.86058432961016,0,0.252470927204373,0,0,0.215423397732799,0,0,0,0,0,0,12.2102100240287,0.567760340833074,1.6025904330053,2.60619134965722,1.64970122972535,1.32745138339963,0.485561272309963,0.302323556964751,0.754420319023592,0.295301892880773,0,0.516856586336442,0,1.06949213515416,0.316036757935816,0,2.06271086496374,6.46835250932197,0.720244376125241,1.16422815404479,2.35770738534752,1.59606210278046,2.67553226403106,2.46823530903181,3.34911444026059,0.704015124191131,0,0.220528398054962,0.32977250588296,0.484393280087717,0.603129249281559,0.358117032009409,0.492422699235184,0,4.45020724825223,0,2.06386867963222,1.48155621895769,0,0.136694227721025,0,0,0,0,0,0.158167996790568,0.406638934253697,0,0.209088296014469,0,0,0.0826534557253359,0,0,0,0,0,0,0.194451188344048,0,0.168956125490778,0.938857909166032,0.39061315453185,0.838874755405687,0.241584120826006,0,0.316011120628178,1.21635129174099,0.205421914329655,0.389762468933385,0,0,0,0,0,0,0,0,0,0,0.906921534460845,0,0,0,0.386379188064381,0.93841237725591,0.73260649706906,1.07184189539533,0,46.3096510945995,40.5086208126316,40.1026859407578,39.5262319390481,41.1049511862385,36.2589070747056,51.9767325178491,55.3895079965791,84.2844880710621,67.3088405277366,0.103787347584177,0,1.02440163452481,0,0.419226325255965,0.735374033800057,1.33348036680969,1.03017528619447,0.962757628775446,0.505394423527595,0.760437899670719,0.754505365544305,0.842773567228942,0.832326981263301,0.804096565378586,0.952587382566147,0.347652977834566,0.77163688185482,0.824171801606613,1.03039244094078,0.685738504770831,0.354951612318675,0.715308569841963,0.581385666529314,0.470546902076653,1.09998990259179,1.46342378298218,0.263069711437843,1.08643291076689,0,0.355905054372522,0.886540341380071,1.22769312950907,0.464810523557898,0.192906610981141,2.74791635731741,1.16965804222704,1.71896843238639,2.10417165275728,1.54413993383661,0.463735671240843
|short_description=p5@Ntrk2
}}
}}

Latest revision as of 20:02, 1 October 2015

Short description:p5@Ntrk2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Ntrk2_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: 0bp_to_ENSMUST00000079828, ENSMUST00000109839, ENSMUST00000109840_5end
EntrezGene:Ntrk2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Ntrk2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.49
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B86.59
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C39.92
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.50
Mouse Astrocytes, donor3.CNhs12107.11633-122C48.63
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.43
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C814.38
Mouse Microglia, donor2.CNhs12634.11736-123E822.67
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.45
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.08
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.52
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.20
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.44
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D325.33
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F39.19
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.06
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.19
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.01
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.86
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E510.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I69.17
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D68.25
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.98
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.17
Mouse Schwann, donor1.CNhs12507.11728-123D92.88
Mouse Schwann, donor2.CNhs12573.11746-123F90.76
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.99
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H11.88
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B24.10
cerebellum, neonate N30.CNhs11135.1395-42I21.89
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A410.19
corpus striatum, adult.CNhs10487.19-21D840.26
corpus striatum, neonate N00.CNhs11226.630-43F15.28
cortex, adult.CNhs10473.12-14D540.50
cortex, neonate N30.CNhs11107.1392-42F239.12
diencephalon, adult.CNhs10482.20-12F211.64
diencephalon, neonate N30.CNhs11201.1388-42B213.63
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.83
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C91.08
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C60.48
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A22.07
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E819.35
hippocampus, neonate N00.CNhs11228.627-43G13.60
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C26.26
medulla oblongata, neonate N30.CNhs11200.1396-42A35.86
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I912.21
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H71.60
ovary, neonate N00.CNhs11217.1299-22I42.61
oviduct, adult pregnant day01.CNhs10500.988-6G61.65
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G86.47
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C71.16
pituitary gland, embryo E14.CNhs11037.398-44A52.36
pituitary gland, embryo E15.CNhs10592.427-16B91.60
pituitary gland, embryo E16.CNhs11036.449-43F62.68
pituitary gland, embryo E17.CNhs11039.1265-44F52.47
pituitary gland, neonate N00.CNhs11190.1308-22E93.35
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.60
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C94.45
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C12.06
spleen, embryo E18.CNhs11011.1271-21F21.48
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.94
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.84
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A146.31
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A240.51
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A340.10
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D739.53
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A441.10
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A536.26
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A651.98
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A755.39
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A884.28
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A967.31
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.80
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I52.75
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C62.10
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.57e-4554
nervous system2.34e-4475
central nervous system2.83e-4473
neural tube8.68e-4352
neural rod8.68e-4352
future spinal cord8.68e-4352
neural keel8.68e-4352
brain5.68e-3847
future brain5.68e-3847
neurectoderm2.45e-3764
neural plate2.45e-3764
presumptive neural plate2.45e-3764
ectoderm-derived structure6.74e-3795
ectoderm6.74e-3795
presumptive ectoderm6.74e-3795
regional part of brain8.23e-3746
anterior neural tube2.21e-3340
regional part of forebrain2.78e-3239
forebrain2.78e-3239
future forebrain2.78e-3239
ecto-epithelium8.85e-3273
gray matter1.26e-3034
pre-chordal neural plate1.70e-3049
brain grey matter5.19e-2629
regional part of telencephalon5.19e-2629
telencephalon5.19e-2629
structure with developmental contribution from neural crest1.16e-2092
cerebral cortex4.20e-1921
cerebral hemisphere4.20e-1921
pallium4.20e-1921
regional part of cerebral cortex1.34e-1617
occipital lobe3.23e-1310
visual cortex3.23e-1310
neocortex3.23e-1310
tube6.11e-13114
anatomical conduit1.16e-11122
posterior neural tube2.66e-0912
chordal neural plate2.66e-0912
basal ganglion5.81e-088
nuclear complex of neuraxis5.81e-088
aggregate regional part of brain5.81e-088
collection of basal ganglia5.81e-088
cerebral subcortex5.81e-088
organ system subdivision1.49e-07194
diencephalon3.96e-0710
future diencephalon3.96e-0710
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr13:58909245..58909263,%2B&oldid=4319772"