FFCP PHASE1:Mm9::chr13:83878789..83878794,+: Difference between revisions
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|id=chr13:83878789..83878794,+
|short_description=p2@ENSMUST00000052354
|description=CAGE_peak_2_at_ENSMUST00000052354_5end
|association_with_transcript=303bp_to_EN...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=100 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=303bp_to_ENSMUST00000052354_5end | |||
|cluster_id=chr13:83878789..83878794,+ | |||
|description=CAGE_peak_2_at_ENSMUST00000052354_5end | |||
|id=chr13:83878789..83878794,+ | |||
|ontology_enrichment_celltype=CL:0000540!5.26e-22!33;CL:0000047!5.26e-22!33;CL:0000031!5.26e-22!33;CL:0000404!5.26e-22!33;CL:0000221!1.89e-20!44;CL:0000133!1.89e-20!44;CL:0002319!9.79e-20!43;CL:0000117!6.55e-17!23;CL:0000337!6.55e-17!23;CL:0000393!7.07e-17!39;CL:0000211!7.07e-17!39;CL:0000055!3.06e-15!50;CL:0002321!1.98e-08!70;CL:0000220!1.98e-08!70;CL:0002609!5.07e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.77e-23,23;CL:0000337,1.77e-23,23;CL:0000540,6.00e-20,33;CL:0000047,6.00e-20,33;CL:0000031,6.00e-20,33;CL:0000404,6.00e-20,33;CL:0002609,1.26e-17,6;CL:0000393,2.84e-16,39;CL:0000211,2.84e-16,39;CL:0002319,2.15e-14,43;CL:0000221,5.59e-14,44;CL:0000133,5.59e-14,44;CL:0002608,1.56e-09,3;CL:0002612,2.03e-08,3;CL:0002321,2.25e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.71e-32!75;UBERON:0001016!2.71e-32!75;UBERON:0001017!2.23e-31!73;UBERON:0005743!2.23e-31!73;UBERON:0004121!8.22e-31!102;UBERON:0000924!8.22e-31!102;UBERON:0006601!8.22e-31!102;UBERON:0002346!4.07e-29!71;UBERON:0003075!4.07e-29!71;UBERON:0007284!4.07e-29!71;UBERON:0000033!1.67e-27!63;UBERON:0002020!7.76e-27!34;UBERON:0001049!6.50e-25!52;UBERON:0005068!6.50e-25!52;UBERON:0006241!6.50e-25!52;UBERON:0007135!6.50e-25!52;UBERON:0003056!6.27e-24!49;UBERON:0002791!2.88e-22!29;UBERON:0003528!2.88e-22!29;UBERON:0001893!2.88e-22!29;UBERON:0000955!3.54e-22!50;UBERON:0006238!3.54e-22!50;UBERON:0002616!2.57e-21!49;UBERON:0003080!1.19e-18!40;UBERON:0002780!3.54e-18!39;UBERON:0001890!3.54e-18!39;UBERON:0006240!3.54e-18!39;UBERON:0007811!1.63e-15!86;UBERON:0000956!1.80e-15!21;UBERON:0001869!1.80e-15!21;UBERON:0000203!1.80e-15!21;UBERON:0000153!8.16e-13!94;UBERON:0002619!7.83e-12!17;UBERON:0002420!5.82e-08!8;UBERON:0007245!5.82e-08!8;UBERON:0010009!5.82e-08!8;UBERON:0010011!5.82e-08!8;UBERON:0000454!5.82e-08!8;UBERON:0002021!1.10e-07!10;UBERON:0000411!1.10e-07!10;UBERON:0001950!1.10e-07!10;UBERON:0003076!7.72e-07!12;UBERON:0003057!7.72e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.71e-33,34;UBERON:0002346,1.21e-31,64;UBERON:0003075,1.21e-31,64;UBERON:0007284,1.21e-31,64;UBERON:0003528,2.09e-29,29;UBERON:0002791,2.09e-29,29;UBERON:0001893,2.09e-29,29;UBERON:0010371,5.56e-27,73;UBERON:0003056,2.41e-26,49;UBERON:0004121,2.26e-24,95;UBERON:0000924,2.26e-24,95;UBERON:0006601,2.26e-24,95;UBERON:0001017,6.89e-23,73;UBERON:0000956,9.34e-23,21;UBERON:0001869,9.34e-23,21;UBERON:0000203,9.34e-23,21;UBERON:0001049,2.57e-22,52;UBERON:0005068,2.57e-22,52;UBERON:0006241,2.57e-22,52;UBERON:0007135,2.57e-22,52;UBERON:0001016,4.06e-22,75;UBERON:0000073,2.69e-21,54;UBERON:0002780,9.89e-21,39;UBERON:0001890,9.89e-21,39;UBERON:0006240,9.89e-21,39;UBERON:0000955,1.61e-20,47;UBERON:0006238,1.61e-20,47;UBERON:0010314,4.01e-20,92;UBERON:0003080,4.20e-20,40;UBERON:0002616,5.50e-19,46;UBERON:0002619,5.87e-17,17;UBERON:0001954,1.46e-09,7;UBERON:0003022,1.46e-09,7;UBERON:0002421,1.46e-09,7;UBERON:0000349,1.46e-09,7;UBERON:0002600,1.46e-09,7;UBERON:0002021,5.50e-09,10;UBERON:0000411,5.50e-09,10;UBERON:0001950,5.50e-09,10;UBERON:0002257,2.03e-08,3;UBERON:0002420,1.01e-07,8;UBERON:0007245,1.01e-07,8;UBERON:0010009,1.01e-07,8;UBERON:0010011,1.01e-07,8;UBERON:0000454,1.01e-07,8;UBERON:0000483,1.19e-07,174;UBERON:0000119,1.73e-07,176;UBERON:0000025,2.26e-07,114;UBERON:0000970,5.00e-07,9;UBERON:0000019,5.00e-07,9;UBERON:0000047,5.00e-07,9;UBERON:0010312,5.00e-07,9;UBERON:0004088,5.00e-07,9;UBERON:0002104,5.00e-07,9;UBERON:0001456,5.00e-07,9;UBERON:0003072,5.00e-07,9;UBERON:0004128,5.00e-07,9;UBERON:0003071,5.00e-07,9 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.388859798148567,0.279972843250725,0,0,0,0,0,0,0,1.21389876515759,2.64495489636016,0,0,0,0,0,0,0,0,4.35496371695606,8.37036817656482,7.36137364729837,0.856952953211411,0.883474163806454,3.79721477566358,2.87536413054709,6.43453150627015,0,0.255374676170375,0.153606533256243,1.71452174049252,0.914876436024097,1.56274011167028,1.11673199600552,1.12552522006336,0.45839474333043,1.17851434189467,1.56608848879013,2.60959224155421,0.302904773332736,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.704217098883403,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0.484875253135222,0,0.878342391034642,1.67557365450764,0,0,0,0,0.299581278809645,0.915001205637253,1.88481528169297,0.347648640384553,1.02286182932132,0.41557608911912,0.162241263067758,0,0,0,0,0.130120442962704,0.229902104433473,0.720248519221397,2.41127708537144,1.29269348387523,1.40925092313335,1.68663104207512,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,1.3377599609307,0,0,0,0.464473343720877,0,0,0,0,0,0.164698954724011,0.754005626400808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0.642202359951168,0.468846746368813,0,0,1.57754109708128,0.390438744296638,1.29254038639679,0.716906393857656,0.445597348164788,0,0.404810701674894,0.584511715822624,0.790575555893047,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,2.29158205375759,1.20297227640581,0,1.5107877947794,0.675022500231806,1.80128481289688,2.26571204492102,1.55328093525546,1.14166082342594,0.399024873401031,0.682934423016537,0.243106717068294,0,0.367687016900028,0.44449345560323,0.206035057238894,0,0,0.25347929989024,0,0.0936415074698824,0.192075457214608,0.0574354689556133,0.476293691283074,0.347652977834566,0.38581844092741,0.412085900803307,0.294397840268795,0.685738504770831,0.354951612318675,0.476872379894642,0.581385666529314,0.282328141245992,0.338458431566706,0.73171189149109,0,0.271608227691724,0,0.118635018124174,0.29551344712669,0,0.309873682371932,0,0.249810577937946,0.233931608445408,0.214871054048298,0,0,0 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.388859798148567,0.279972843250725,0,0,0,0,0,0,0,1.21389876515759,2.64495489636016,0,0,0,0,0,0,0,0,4.35496371695606,8.37036817656482,7.36137364729837,0.856952953211411,0.883474163806454,3.79721477566358,2.87536413054709,6.43453150627015,0,0.255374676170375,0.153606533256243,1.71452174049252,0.914876436024097,1.56274011167028,1.11673199600552,1.12552522006336,0.45839474333043,1.17851434189467,1.56608848879013,2.60959224155421,0.302904773332736,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.704217098883403,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0.484875253135222,0,0.878342391034642,1.67557365450764,0,0,0,0,0.299581278809645,0.915001205637253,1.88481528169297,0.347648640384553,1.02286182932132,0.41557608911912,0.162241263067758,0,0,0,0,0.130120442962704,0.229902104433473,0.720248519221397,2.41127708537144,1.29269348387523,1.40925092313335,1.68663104207512,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,1.3377599609307,0,0,0,0.464473343720877,0,0,0,0,0,0.164698954724011,0.754005626400808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0.642202359951168,0.468846746368813,0,0,1.57754109708128,0.390438744296638,1.29254038639679,0.716906393857656,0.445597348164788,0,0.404810701674894,0.584511715822624,0.790575555893047,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,2.29158205375759,1.20297227640581,0,1.5107877947794,0.675022500231806,1.80128481289688,2.26571204492102,1.55328093525546,1.14166082342594,0.399024873401031,0.682934423016537,0.243106717068294,0,0.367687016900028,0.44449345560323,0.206035057238894,0,0,0.25347929989024,0,0.0936415074698824,0.192075457214608,0.0574354689556133,0.476293691283074,0.347652977834566,0.38581844092741,0.412085900803307,0.294397840268795,0.685738504770831,0.354951612318675,0.476872379894642,0.581385666529314,0.282328141245992,0.338458431566706,0.73171189149109,0,0.271608227691724,0,0.118635018124174,0.29551344712669,0,0.309873682371932,0,0.249810577937946,0.233931608445408,0.214871054048298,0,0,0 | ||
|short_description=p2@ENSMUST00000052354 | |||
}} | }} |
Latest revision as of 09:08, 6 August 2015
Short description: | p2@ENSMUST00000052354 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ENSMUST00000052354_5end |
Coexpression cluster: | MCL_coexpression_mm9:100 |
Association with transcript: | 303bp_to_ENSMUST00000052354_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.77e-23 | 23 |
neuroblast (sensu Vertebrata) | 1.77e-23 | 23 |
neuron | 6.00e-20 | 33 |
neuronal stem cell | 6.00e-20 | 33 |
neuroblast | 6.00e-20 | 33 |
electrically signaling cell | 6.00e-20 | 33 |
neuron of cerebral cortex | 1.26e-17 | 6 |
electrically responsive cell | 2.84e-16 | 39 |
electrically active cell | 2.84e-16 | 39 |
neural cell | 2.15e-14 | 43 |
ectodermal cell | 5.59e-14 | 44 |
neurectodermal cell | 5.59e-14 | 44 |
hippocampal neuron | 1.56e-09 | 3 |
neuron of the ventral spinal cord | 2.03e-08 | 3 |
embryonic cell | 2.25e-07 | 70 |