Personal tools

FFCP PHASE1:Mm9::chr2:165705099..165705145,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr2:165705099..165705145,- |short_description=p3@Zmynd8 |description=CAGE_peak_3_at_Zmynd8_5end |association_with_transcript=-76bp_to_uc008nyg.1_5end |EntrezG...")
 
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr2:165705099..165705145,-
|DHSsupport=NA
|short_description=p3@Zmynd8
|DPIdataset=NA
|description=CAGE_peak_3_at_Zmynd8_5end
|association_with_transcript=-76bp_to_uc008nyg.1_5end
|EntrezGene=228880
|EntrezGene=228880
|HGNC=
|HGNC=
|MCL_coexpression_id=580
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=-76bp_to_uc008nyg.1_5end
|cluster_id=chr2:165705099..165705145,-
|description=CAGE_peak_3_at_Zmynd8_5end
|id=chr2:165705099..165705145,-
|ontology_enrichment_celltype=CL:0000117!8.26e-15!23;CL:0000337!8.26e-15!23;CL:0000540!9.15e-10!33;CL:0000047!9.15e-10!33;CL:0000031!9.15e-10!33;CL:0000404!9.15e-10!33;CL:0000221!8.89e-08!44;CL:0000133!8.89e-08!44;CL:0002319!1.24e-07!43
|ontology_enrichment_celltype_v019_2=CL:0000117,4.92e-23,23;CL:0000337,4.92e-23,23;CL:0000540,8.92e-15,33;CL:0000047,8.92e-15,33;CL:0000031,8.92e-15,33;CL:0000404,8.92e-15,33;CL:0000393,2.64e-11,39;CL:0000211,2.64e-11,39;CL:0002319,1.46e-09,43;CL:0000221,3.53e-09,44;CL:0000133,3.53e-09,44;CL:0002609,6.93e-08,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!2.64e-23!63;UBERON:0001049!1.53e-22!52;UBERON:0005068!1.53e-22!52;UBERON:0006241!1.53e-22!52;UBERON:0007135!1.53e-22!52;UBERON:0001017!5.77e-22!73;UBERON:0005743!5.77e-22!73;UBERON:0000955!1.37e-21!50;UBERON:0006238!1.37e-21!50;UBERON:0002020!1.95e-21!34;UBERON:0002616!8.18e-21!49;UBERON:0000073!1.53e-20!75;UBERON:0001016!1.53e-20!75;UBERON:0002346!1.70e-20!71;UBERON:0003075!1.70e-20!71;UBERON:0007284!1.70e-20!71;UBERON:0004121!2.30e-19!102;UBERON:0000924!2.30e-19!102;UBERON:0006601!2.30e-19!102;UBERON:0003056!5.01e-19!49;UBERON:0002791!1.58e-18!29;UBERON:0003528!1.58e-18!29;UBERON:0001893!1.58e-18!29;UBERON:0003080!3.99e-17!40;UBERON:0002780!1.43e-16!39;UBERON:0001890!1.43e-16!39;UBERON:0006240!1.43e-16!39;UBERON:0000956!1.01e-13!21;UBERON:0001869!1.01e-13!21;UBERON:0000203!1.01e-13!21;UBERON:0000153!1.42e-12!94;UBERON:0007811!1.07e-11!86;UBERON:0002619!4.16e-11!17;UBERON:0002021!3.33e-08!10;UBERON:0000411!3.33e-08!10;UBERON:0001950!3.33e-08!10;UBERON:0000025!1.08e-07!114;UBERON:0004111!1.36e-07!122
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.08e-32,54;UBERON:0002020,6.16e-32,34;UBERON:0001049,6.72e-30,52;UBERON:0005068,6.72e-30,52;UBERON:0006241,6.72e-30,52;UBERON:0007135,6.72e-30,52;UBERON:0001017,4.20e-28,73;UBERON:0003528,3.20e-27,29;UBERON:0002791,3.20e-27,29;UBERON:0001893,3.20e-27,29;UBERON:0001016,6.51e-27,75;UBERON:0002346,1.01e-26,64;UBERON:0003075,1.01e-26,64;UBERON:0007284,1.01e-26,64;UBERON:0000955,1.35e-25,47;UBERON:0006238,1.35e-25,47;UBERON:0002616,1.96e-24,46;UBERON:0003080,5.79e-22,40;UBERON:0004121,8.41e-22,95;UBERON:0000924,8.41e-22,95;UBERON:0006601,8.41e-22,95;UBERON:0010371,1.44e-21,73;UBERON:0002780,4.19e-21,39;UBERON:0001890,4.19e-21,39;UBERON:0006240,4.19e-21,39;UBERON:0003056,7.09e-21,49;UBERON:0000956,1.89e-19,21;UBERON:0001869,1.89e-19,21;UBERON:0000203,1.89e-19,21;UBERON:0002619,2.96e-15,17;UBERON:0010314,3.99e-14,92;UBERON:0002021,2.51e-12,10;UBERON:0000411,2.51e-12,10;UBERON:0001950,2.51e-12,10;UBERON:0002420,8.51e-09,8;UBERON:0007245,8.51e-09,8;UBERON:0010009,8.51e-09,8;UBERON:0010011,8.51e-09,8;UBERON:0000454,8.51e-09,8;UBERON:0003076,2.70e-08,12;UBERON:0003057,2.70e-08,12;UBERON:0000025,4.44e-07,114
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0.171200729931206,0,0.333109761815663,0,0,0,0,0,2.04103896362567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0.439372365468944,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,5.66486090406874,7.40587370980846,5.07065122804943,0,0,0,0,0,0.299600110518405,0.768436610643109,6.947204024668,9.04539786822327,7.15104868594699,2.28520787523043,3.75476519617743,8.32937434661688,5.75072826109418,9.19218786610021,4.40463523997555,5.2351808614927,5.52983519722476,4.74790635828698,6.12967212136145,6.25096044668112,3.62937898701795,5.6276261003168,4.12555268997387,5.00868595305235,6.40672563595963,5.77838282058432,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.563373679106722,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0,0.461230994512117,0.150722640552623,0,0,0.247194967734374,0.289198713839823,0,0.161766849947409,0,0,0,21.958559775866,23.8769245767339,0,0,0,0,4.49371918214468,7.32000964509802,7.413606774659,5.73620256634512,6.64860189058859,5.40248915854856,7.46309810111685,0.509196819251581,0.373220911830279,0.758168275301024,0.631325567659422,0.260240885925407,0.459804208866946,0.360124259610698,0.753524089178575,1.08858398642125,1.66547836370305,1.3118241438362,3.88055056108524,0,1.32374256117473,1.58356011747554,1.31517439456545,0.834141747676794,0.348252166522167,1.23469281844766,0,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0.308534225774757,0.232533944750408,0.536546802799238,0.467061369468678,0.16455984991348,0.164167464079095,0.891756905004413,0.438599962275997,0.439100230582101,0.536825675041487,10.7247873767705,12.5543627102727,0,0,0,0.232236671860439,0.257734922644187,0,0.667134131534611,0,0,0.494096864172033,0.251335208800269,0,0.58489226135736,0,0.216138049874694,0,0.569003702859245,0,1.1270773567308,0.203651327845314,0.387904974335251,0.350679099451593,0.0632365371242573,0,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0.757965647081939,0.162964976442026,0.509235257325564,0.234690248288502,0.167506257441816,0.714130922658041,0.195133647857799,0.788175720530955,1.10732344824387,0.637819074629948,0,0,0,0,0,0,0,4.81651769963376,3.6335622843583,0,0,0.631016438832513,0.390438744296638,0,0,1.11399337041197,0,0,0,0,10.6036034419196,0,0,0.325773918707152,0.494910368917606,0,0.242780636154981,0.604647113929502,0,0,0,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,0.340439605753788,0.18006109403131,0,0,0.177340233642274,0.356737635204141,0.493647061806363,0.304464949114599,0.23467170806371,0,0.220528398054962,0.16488625294148,0.968786560175433,0.542816324353403,0.238744688006273,0.164140899745061,0,2.78137953015765,0,0.206386867963223,0.185194527369712,0,0,0,0,0.139951452323658,0,1.90934123603023,0.474503990371703,0,0.540026704109006,0,0,0.134864346384821,0.743881101528023,0,0.648074866458964,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0,0,0,0,0,0,0.308132871494482,0,0,0,0,0.147689527174577,0,0,0,0.0974578807397524,0,0,0.680191150845634,0,0,0,0.772758376128762,0.187682475451182,0.73260649706906,0,0,12.4245405375755,8.74617949363636,8.02053718815155,5.32744865265431,4.11049511862385,10.5755145634558,8.10027000278167,10.3573876741571,8.60970577069989,10.8729665467882,0.207574695168353,0.798049746802062,1.19513524027894,0.972426868273176,0.838452650511929,1.83843508450014,1.55572709461131,1.44224540067226,1.28367683836726,1.01078884705519,0.50695859978048,1.13175804831646,1.591905626988,1.08842759088278,1.20614484806788,1.90517476513229,0.347652977834566,0.192909220463705,1.64834360321323,1.17759136107518,1.02860775715625,1.59728225543404,1.1921809497366,1.59881058295561,1.41164070622996,0.846146078916765,1.46342378298218,2.10455769150274,1.22223702461276,2.24456908663095,1.30498519936592,1.0835493061312,2.04615521584845,1.08455788830176,1.35034627686799,3.2475375131933,0.935726433781634,1.28922632428979,0.191288332068843,0.882365676478062,0
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0.171200729931206,0,0.333109761815663,0,0,0,0,0,2.04103896362567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0.439372365468944,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,5.66486090406874,7.40587370980846,5.07065122804943,0,0,0,0,0,0.299600110518405,0.768436610643109,6.947204024668,9.04539786822327,7.15104868594699,2.28520787523043,3.75476519617743,8.32937434661688,5.75072826109418,9.19218786610021,4.40463523997555,5.2351808614927,5.52983519722476,4.74790635828698,6.12967212136145,6.25096044668112,3.62937898701795,5.6276261003168,4.12555268997387,5.00868595305235,6.40672563595963,5.77838282058432,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.563373679106722,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0,0.461230994512117,0.150722640552623,0,0,0.247194967734374,0.289198713839823,0,0.161766849947409,0,0,0,21.958559775866,23.8769245767339,0,0,0,0,4.49371918214468,7.32000964509802,7.413606774659,5.73620256634512,6.64860189058859,5.40248915854856,7.46309810111685,0.509196819251581,0.373220911830279,0.758168275301024,0.631325567659422,0.260240885925407,0.459804208866946,0.360124259610698,0.753524089178575,1.08858398642125,1.66547836370305,1.3118241438362,3.88055056108524,0,1.32374256117473,1.58356011747554,1.31517439456545,0.834141747676794,0.348252166522167,1.23469281844766,0,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0.308534225774757,0.232533944750408,0.536546802799238,0.467061369468678,0.16455984991348,0.164167464079095,0.891756905004413,0.438599962275997,0.439100230582101,0.536825675041487,10.7247873767705,12.5543627102727,0,0,0,0.232236671860439,0.257734922644187,0,0.667134131534611,0,0,0.494096864172033,0.251335208800269,0,0.58489226135736,0,0.216138049874694,0,0.569003702859245,0,1.1270773567308,0.203651327845314,0.387904974335251,0.350679099451593,0.0632365371242573,0,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0.757965647081939,0.162964976442026,0.509235257325564,0.234690248288502,0.167506257441816,0.714130922658041,0.195133647857799,0.788175720530955,1.10732344824387,0.637819074629948,0,0,0,0,0,0,0,4.81651769963376,3.6335622843583,0,0,0.631016438832513,0.390438744296638,0,0,1.11399337041197,0,0,0,0,10.6036034419196,0,0,0.325773918707152,0.494910368917606,0,0.242780636154981,0.604647113929502,0,0,0,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,0.340439605753788,0.18006109403131,0,0,0.177340233642274,0.356737635204141,0.493647061806363,0.304464949114599,0.23467170806371,0,0.220528398054962,0.16488625294148,0.968786560175433,0.542816324353403,0.238744688006273,0.164140899745061,0,2.78137953015765,0,0.206386867963223,0.185194527369712,0,0,0,0,0.139951452323658,0,1.90934123603023,0.474503990371703,0,0.540026704109006,0,0,0.134864346384821,0.743881101528023,0,0.648074866458964,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0,0,0,0,0,0,0.308132871494482,0,0,0,0,0.147689527174577,0,0,0,0.0974578807397524,0,0,0.680191150845634,0,0,0,0.772758376128762,0.187682475451182,0.73260649706906,0,0,12.4245405375755,8.74617949363636,8.02053718815155,5.32744865265431,4.11049511862385,10.5755145634558,8.10027000278167,10.3573876741571,8.60970577069989,10.8729665467882,0.207574695168353,0.798049746802062,1.19513524027894,0.972426868273176,0.838452650511929,1.83843508450014,1.55572709461131,1.44224540067226,1.28367683836726,1.01078884705519,0.50695859978048,1.13175804831646,1.591905626988,1.08842759088278,1.20614484806788,1.90517476513229,0.347652977834566,0.192909220463705,1.64834360321323,1.17759136107518,1.02860775715625,1.59728225543404,1.1921809497366,1.59881058295561,1.41164070622996,0.846146078916765,1.46342378298218,2.10455769150274,1.22223702461276,2.24456908663095,1.30498519936592,1.0835493061312,2.04615521584845,1.08455788830176,1.35034627686799,3.2475375131933,0.935726433781634,1.28922632428979,0.191288332068843,0.882365676478062,0
|short_description=p3@Zmynd8
}}
}}

Latest revision as of 04:17, 26 September 2015

Short description:p3@Zmynd8
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Zmynd8_5end
Coexpression cluster:MCL_coexpression_mm9:580
Association with transcript: -76bp_to_uc008nyg.1_5end
EntrezGene:Zmynd8
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Zmynd8

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.04
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C35.66
Mouse Granule cells, donor2.CNhs12357.11731-123E37.41
Mouse Granule cells, donor3.CNhs12108.11636-122C75.07
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D56.95
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F59.05
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D97.15
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.75
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D28.33
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.75
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D69.19
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.24
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.53
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.75
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.13
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.25
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.63
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.13
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.01
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.41
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.78
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B221.96
cerebellum, neonate N30.CNhs11135.1395-42I223.88
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A44.49
corpus striatum, adult.CNhs10487.19-21D87.32
corpus striatum, neonate N00.CNhs11226.630-43F17.41
cortex, adult.CNhs10473.12-14D55.74
cortex, neonate N30.CNhs11107.1392-42F26.65
diencephalon, adult.CNhs10482.20-12F25.40
diencephalon, neonate N30.CNhs11201.1388-42B27.46
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C61.09
eyeball, neonate N01.CNhs11140.1532-43E71.67
eyeball, neonate N02.CNhs11205.1551-44G81.31
eyeball, neonate N16.CNhs11188.777-19A23.88
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H21.32
forelimb, embryo E13.CNhs10589.384-1E21.58
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.89
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E810.72
hippocampus, neonate N00.CNhs11228.627-43G112.55
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C24.82
medulla oblongata, neonate N30.CNhs11200.1396-42A33.63
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I910.60
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.97
skin, neonate N03.CNhs11215.662-22H30.54
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.78
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.74
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A112.42
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A28.75
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A38.02
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.33
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A510.58
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.10
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A710.36
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A88.61
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A910.87
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.59
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.21
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.08
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I53.25
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system6.08e-3254
gray matter6.16e-3234
neural tube6.72e-3052
neural rod6.72e-3052
future spinal cord6.72e-3052
neural keel6.72e-3052
central nervous system4.20e-2873
brain grey matter3.20e-2729
regional part of telencephalon3.20e-2729
telencephalon3.20e-2729
nervous system6.51e-2775
neurectoderm1.01e-2664
neural plate1.01e-2664
presumptive neural plate1.01e-2664
brain1.35e-2547
future brain1.35e-2547
regional part of brain1.96e-2446
anterior neural tube5.79e-2240
ectoderm-derived structure8.41e-2295
ectoderm8.41e-2295
presumptive ectoderm8.41e-2295
ecto-epithelium1.44e-2173
regional part of forebrain4.19e-2139
forebrain4.19e-2139
future forebrain4.19e-2139
pre-chordal neural plate7.09e-2149
cerebral cortex1.89e-1921
cerebral hemisphere1.89e-1921
pallium1.89e-1921
regional part of cerebral cortex2.96e-1517
structure with developmental contribution from neural crest3.99e-1492
occipital lobe2.51e-1210
visual cortex2.51e-1210
neocortex2.51e-1210
basal ganglion8.51e-098
nuclear complex of neuraxis8.51e-098
aggregate regional part of brain8.51e-098
collection of basal ganglia8.51e-098
cerebral subcortex8.51e-098
posterior neural tube2.70e-0812
chordal neural plate2.70e-0812
tube4.44e-07114
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr2:165705099..165705145,-&oldid=4232703"