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FFCP PHASE1:Mm9::chr5:23182252..23182307,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr5:23182252..23182307,-
|DHSsupport=NA
|short_description=p3@Srpk2
|DPIdataset=NA
|description=CAGE_peak_3_at_Srpk2_5end
|association_with_transcript=0bp_to_ENSMUST00000171854,uc008wqf.1_5end
|EntrezGene=20817
|EntrezGene=20817
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q6P5E1
|UniProt=Q6P5E1
|association_with_transcript=0bp_to_ENSMUST00000171854,uc008wqf.1_5end
|cluster_id=chr5:23182252..23182307,-
|description=CAGE_peak_3_at_Srpk2_5end
|id=chr5:23182252..23182307,-
|ontology_enrichment_celltype=CL:0000117!4.23e-09!23;CL:0000337!4.23e-09!23;CL:0000393!5.26e-08!39;CL:0000211!5.26e-08!39;CL:0000540!1.46e-07!33;CL:0000047!1.46e-07!33;CL:0000031!1.46e-07!33;CL:0000404!1.46e-07!33;CL:0000055!9.71e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000117,4.16e-11,23;CL:0000337,4.16e-11,23;CL:0000540,8.76e-07,33;CL:0000047,8.76e-07,33;CL:0000031,8.76e-07,33;CL:0000404,8.76e-07,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.22e-20!73;UBERON:0005743!1.22e-20!73;UBERON:0000073!5.59e-20!75;UBERON:0001016!5.59e-20!75;UBERON:0001049!1.47e-19!52;UBERON:0005068!1.47e-19!52;UBERON:0006241!1.47e-19!52;UBERON:0007135!1.47e-19!52;UBERON:0000033!1.23e-18!63;UBERON:0004121!1.36e-18!102;UBERON:0000924!1.36e-18!102;UBERON:0006601!1.36e-18!102;UBERON:0000955!1.55e-18!50;UBERON:0006238!1.55e-18!50;UBERON:0002616!6.08e-18!49;UBERON:0002346!2.58e-17!71;UBERON:0003075!2.58e-17!71;UBERON:0007284!2.58e-17!71;UBERON:0002020!3.28e-15!34;UBERON:0003080!8.31e-14!40;UBERON:0003056!9.58e-14!49;UBERON:0002780!4.05e-13!39;UBERON:0001890!4.05e-13!39;UBERON:0006240!4.05e-13!39;UBERON:0002791!2.39e-12!29;UBERON:0003528!2.39e-12!29;UBERON:0001893!2.39e-12!29;UBERON:0007811!1.31e-08!86;UBERON:0000956!6.86e-08!21;UBERON:0001869!6.86e-08!21;UBERON:0000203!6.86e-08!21;UBERON:0002619!7.06e-08!17;UBERON:0000153!2.27e-07!94;UBERON:0002021!4.11e-07!10;UBERON:0000411!4.11e-07!10;UBERON:0001950!4.11e-07!10;UBERON:0000468!9.30e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.44e-26,54;UBERON:0001049,4.77e-24,52;UBERON:0005068,4.77e-24,52;UBERON:0006241,4.77e-24,52;UBERON:0007135,4.77e-24,52;UBERON:0001017,4.00e-23,73;UBERON:0002346,1.09e-22,64;UBERON:0003075,1.09e-22,64;UBERON:0007284,1.09e-22,64;UBERON:0001016,5.00e-22,75;UBERON:0002020,3.57e-20,34;UBERON:0000955,1.33e-19,47;UBERON:0006238,1.33e-19,47;UBERON:0010371,6.32e-19,73;UBERON:0002616,8.89e-19,46;UBERON:0004121,2.34e-18,95;UBERON:0000924,2.34e-18,95;UBERON:0006601,2.34e-18,95;UBERON:0003528,6.65e-16,29;UBERON:0002791,6.65e-16,29;UBERON:0001893,6.65e-16,29;UBERON:0003056,6.97e-16,49;UBERON:0003080,3.22e-15,40;UBERON:0010314,1.69e-14,92;UBERON:0002780,2.86e-14,39;UBERON:0001890,2.86e-14,39;UBERON:0006240,2.86e-14,39;UBERON:0002619,5.66e-11,17;UBERON:0002021,4.78e-10,10;UBERON:0000411,4.78e-10,10;UBERON:0001950,4.78e-10,10;UBERON:0003076,6.10e-10,12;UBERON:0003057,6.10e-10,12;UBERON:0000956,2.34e-09,21;UBERON:0001869,2.34e-09,21;UBERON:0000203,2.34e-09,21;UBERON:0002420,2.38e-08,8;UBERON:0007245,2.38e-08,8;UBERON:0010009,2.38e-08,8;UBERON:0010011,2.38e-08,8;UBERON:0000454,2.38e-08,8;UBERON:0002240,9.75e-07,6;UBERON:0005174,9.75e-07,6;UBERON:0001137,9.75e-07,6
|phase1_expression=1.76163731815273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46625541438102,0,0,0,0,0,0.430761996159075,0,0,0.252030129759931,0,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,1.00717454380462,1.52065396829272,0.550640256485045,0,1.74420125104357,2.19686182734472,1.36100929351998,0.699932108126813,0,0,0,0,0.257259436035947,0.573066879877513,1.03134418455488,1.41621522601718,2.11596391708813,3.80298842103708,0,0,0.449949858640699,0,0,1.19840044207362,0,0.207379224616955,0.540023753326763,0.841299845405528,5.42736870367227,7.28866185140325,0.61245399607477,1.34183659425531,0,12.1127469099328,15.9609172606485,16.2822925251618,3.29715719325485,5.03182039813253,2.6045668527838,18.1468949350898,11.2552522006336,14.8214300343506,9.42811473515737,7.83044244395066,4.65998614563251,0.075726193333184,0.377857800533928,0,0,0,0,0,0,0.561777680527007,0.511290967734173,0.259786004602869,0,0.422530259330042,1.28326477414318,0,7.11066703153331,0,0,0,0.34255163915718,0,0.742210695324124,0.173485326766136,0,0.230615497256059,0.904335843315735,1.29347577849275,0.502666365318702,0,0.433798070759735,0,0.161766849947409,0.220841518460394,0,0,9.07620470735796,8.16842156572475,0,0,0,0,20.8208988772704,8.6925114535539,6.03140890141749,7.99591872884472,6.64860189058859,18.90871205492,11.1946471516753,0.712875546952214,0.124406970610093,0,1.05220927943237,0,0,0.540186389416048,1.05493372485001,1.2246569847239,1.2811372028485,1.12442069471675,4.13925393182425,0,0.378212160335639,0,0.876782929710299,0,0.696504333044333,0.61734640922383,0.995171334092466,0,0,0,0.414251545071004,0.234526059981096,0.720248245844059,0.23674473558521,0.983821158737019,0.462801338662135,0.465067889500816,1.07309360559848,1.63471479314037,0.16455984991348,0,0.162137619091711,0.146199987425332,0,0,6.72927835405207,8.54108282748061,0,0,0,0,0.128867461322093,0.403367049246685,0.22237804384487,0,0,0.164698954724011,0.754005626400808,0.596869416123452,0.38992817423824,0.898819408654221,0.216138049874694,0.597423819763102,0.379335801906163,0.342745537829186,1.1270773567308,0.814605311381257,0.387904974335251,0.841629838683823,1.26473074248515,0.442830443938806,0.941992367048249,0.493588655687202,0.296452627087149,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0,1.43768206527355,0,0,0,0,0,0.184753190166605,0.189491411770485,0.325929952884052,0.169745085775188,0.234690248288502,0.502518772325447,0,0.780534591431195,0.472905432318573,1.10732344824387,0.637819074629948,0.163863314715738,0,0.144649058581512,0,0,0.491764273019036,0.551873492609465,18.3027672586083,17.9333880486071,1.14754461763673,0.252470927204373,0.315508219416257,0.390438744296638,0,0.477937595905104,0.445597348164788,0.566153061577665,0.404810701674894,0.584511715822624,0.395287777946524,7.06906896127976,1.70328102249922,0.35613120733451,1.30309567482861,0.329940245945071,0,0,0.604647113929502,0,0,0.307435147943927,1.29214146584111,0.727067458955011,0,0.316036757935816,0,0,0.340439605753788,0.18006109403131,0.388076051348264,0.643011105094777,1.41872186913819,0.535106452806212,1.15184314421485,0.913394847343798,0,0,0.441056796109924,0.49465875882444,0.645857706783622,0.180938774784468,0.358117032009409,0.164140899745061,0,17.9862542950194,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.324016022465404,0.836353184057875,0.436725127492355,0.269728692769641,1.32245529160537,0.26175594198403,0.129614973291793,0.621339313086926,1.12738587736838,0.598066184175915,0.66183396182839,0.583353565032143,1.42075805825504,2.02747350588934,3.40335992072686,4.6873578543822,6.08184197669123,2.65742532908607,0.864090018773596,0,0.202725215290164,0.205421914329655,0.129920822977795,0,0,0.120195449519969,0,0.201932899896295,0,0,0,0,0,0.453460767230423,0.221985953374065,0.0897138566094757,0,0.772758376128762,0.750729901804728,0.549454872801795,0.214368379079066,0,9.60078132449013,7.36520378411483,13.1765968091061,2.57779773515531,8.90607275701835,12.0863023582352,4.72515750162264,4.05289082901798,8.60970577069989,6.21312374102184,0.415149390336707,0.798049746802062,0.341467211508268,1.21553358534147,1.25767897576789,1.83843508450014,2.00022055021454,0,1.28367683836726,2.02157769411038,2.28131369901216,2.26351609663291,1.03005658216871,0.89635213366817,1.03383844120104,0.952587382566147,1.27472758539341,1.54327376370964,0.412085900803307,0.735994600671987,1.37147700954166,1.4198064492747,1.66905332963125,1.0174249164263,1.41164070622996,1.18460451048347,1.64635175585495,1.57841826862706,0.814824683075171,1.12228454331548,0.830445126869219,1.77308068276014,2.86461730218783,1.23949472948773,1.35034627686799,2.74791635731741,0.935726433781634,1.07435527024149,0.57386499620653,0.882365676478062,0.695603506861264
|phase1_expression=1.76163731815273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46625541438102,0,0,0,0,0,0.430761996159075,0,0,0.252030129759931,0,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,1.00717454380462,1.52065396829272,0.550640256485045,0,1.74420125104357,2.19686182734472,1.36100929351998,0.699932108126813,0,0,0,0,0.257259436035947,0.573066879877513,1.03134418455488,1.41621522601718,2.11596391708813,3.80298842103708,0,0,0.449949858640699,0,0,1.19840044207362,0,0.207379224616955,0.540023753326763,0.841299845405528,5.42736870367227,7.28866185140325,0.61245399607477,1.34183659425531,0,12.1127469099328,15.9609172606485,16.2822925251618,3.29715719325485,5.03182039813253,2.6045668527838,18.1468949350898,11.2552522006336,14.8214300343506,9.42811473515737,7.83044244395066,4.65998614563251,0.075726193333184,0.377857800533928,0,0,0,0,0,0,0.561777680527007,0.511290967734173,0.259786004602869,0,0.422530259330042,1.28326477414318,0,7.11066703153331,0,0,0,0.34255163915718,0,0.742210695324124,0.173485326766136,0,0.230615497256059,0.904335843315735,1.29347577849275,0.502666365318702,0,0.433798070759735,0,0.161766849947409,0.220841518460394,0,0,9.07620470735796,8.16842156572475,0,0,0,0,20.8208988772704,8.6925114535539,6.03140890141749,7.99591872884472,6.64860189058859,18.90871205492,11.1946471516753,0.712875546952214,0.124406970610093,0,1.05220927943237,0,0,0.540186389416048,1.05493372485001,1.2246569847239,1.2811372028485,1.12442069471675,4.13925393182425,0,0.378212160335639,0,0.876782929710299,0,0.696504333044333,0.61734640922383,0.995171334092466,0,0,0,0.414251545071004,0.234526059981096,0.720248245844059,0.23674473558521,0.983821158737019,0.462801338662135,0.465067889500816,1.07309360559848,1.63471479314037,0.16455984991348,0,0.162137619091711,0.146199987425332,0,0,6.72927835405207,8.54108282748061,0,0,0,0,0.128867461322093,0.403367049246685,0.22237804384487,0,0,0.164698954724011,0.754005626400808,0.596869416123452,0.38992817423824,0.898819408654221,0.216138049874694,0.597423819763102,0.379335801906163,0.342745537829186,1.1270773567308,0.814605311381257,0.387904974335251,0.841629838683823,1.26473074248515,0.442830443938806,0.941992367048249,0.493588655687202,0.296452627087149,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0,1.43768206527355,0,0,0,0,0,0.184753190166605,0.189491411770485,0.325929952884052,0.169745085775188,0.234690248288502,0.502518772325447,0,0.780534591431195,0.472905432318573,1.10732344824387,0.637819074629948,0.163863314715738,0,0.144649058581512,0,0,0.491764273019036,0.551873492609465,18.3027672586083,17.9333880486071,1.14754461763673,0.252470927204373,0.315508219416257,0.390438744296638,0,0.477937595905104,0.445597348164788,0.566153061577665,0.404810701674894,0.584511715822624,0.395287777946524,7.06906896127976,1.70328102249922,0.35613120733451,1.30309567482861,0.329940245945071,0,0,0.604647113929502,0,0,0.307435147943927,1.29214146584111,0.727067458955011,0,0.316036757935816,0,0,0.340439605753788,0.18006109403131,0.388076051348264,0.643011105094777,1.41872186913819,0.535106452806212,1.15184314421485,0.913394847343798,0,0,0.441056796109924,0.49465875882444,0.645857706783622,0.180938774784468,0.358117032009409,0.164140899745061,0,17.9862542950194,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.324016022465404,0.836353184057875,0.436725127492355,0.269728692769641,1.32245529160537,0.26175594198403,0.129614973291793,0.621339313086926,1.12738587736838,0.598066184175915,0.66183396182839,0.583353565032143,1.42075805825504,2.02747350588934,3.40335992072686,4.6873578543822,6.08184197669123,2.65742532908607,0.864090018773596,0,0.202725215290164,0.205421914329655,0.129920822977795,0,0,0.120195449519969,0,0.201932899896295,0,0,0,0,0,0.453460767230423,0.221985953374065,0.0897138566094757,0,0.772758376128762,0.750729901804728,0.549454872801795,0.214368379079066,0,9.60078132449013,7.36520378411483,13.1765968091061,2.57779773515531,8.90607275701835,12.0863023582352,4.72515750162264,4.05289082901798,8.60970577069989,6.21312374102184,0.415149390336707,0.798049746802062,0.341467211508268,1.21553358534147,1.25767897576789,1.83843508450014,2.00022055021454,0,1.28367683836726,2.02157769411038,2.28131369901216,2.26351609663291,1.03005658216871,0.89635213366817,1.03383844120104,0.952587382566147,1.27472758539341,1.54327376370964,0.412085900803307,0.735994600671987,1.37147700954166,1.4198064492747,1.66905332963125,1.0174249164263,1.41164070622996,1.18460451048347,1.64635175585495,1.57841826862706,0.814824683075171,1.12228454331548,0.830445126869219,1.77308068276014,2.86461730218783,1.23949472948773,1.35034627686799,2.74791635731741,0.935726433781634,1.07435527024149,0.57386499620653,0.882365676478062,0.695603506861264
|short_description=p3@Srpk2
}}
}}

Latest revision as of 20:22, 25 September 2015

Short description:p3@Srpk2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Srpk2_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000171854, uc008wqf.1_5end
EntrezGene:Srpk2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Srpk2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.76
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.47
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.52
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.74
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.20
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.29
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.34
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D312.11
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F315.96
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D716.28
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.30
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.03
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E418.15
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E511.26
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I614.82
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D69.43
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.83
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.66
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C11.29
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B29.08
cerebellum, neonate N30.CNhs11135.1395-42I28.17
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A420.82
corpus striatum, adult.CNhs10487.19-21D88.69
corpus striatum, neonate N00.CNhs11226.630-43F16.03
cortex, adult.CNhs10473.12-14D58.00
cortex, neonate N30.CNhs11107.1392-42F26.65
diencephalon, adult.CNhs10482.20-12F218.91
diencephalon, neonate N30.CNhs11201.1388-42B211.19
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C61.22
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G81.12
eyeball, neonate N16.CNhs11188.777-19A24.14
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E31.63
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E86.73
hippocampus, neonate N00.CNhs11228.627-43G18.54
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.84
kidney, neonate N10.CNhs11206.758-6D51.26
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.94
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C218.30
medulla oblongata, neonate N30.CNhs11200.1396-42A317.93
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.15
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I97.07
ovary, adult.CNhs10507.91-2I71.70
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I41.30
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B91.42
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C917.99
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A91.32
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I51.42
testis, embryo E18.CNhs11027.503-18G52.03
testis, neonate N00.CNhs11189.1300-22B73.40
testis, neonate N07.CNhs11222.726-26I44.69
testis, neonate N10.CNhs11204.763-44D96.08
testis, neonate N20.CNhs11110.839-18H32.66
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A19.60
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.37
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A313.18
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.58
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.91
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A512.09
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.05
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A88.61
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.21
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.26
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.90
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I52.75
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)4.16e-1123
neuroblast (sensu Vertebrata)4.16e-1123
neuron8.76e-0733
neuronal stem cell8.76e-0733
neuroblast8.76e-0733
electrically signaling cell8.76e-0733

Uber anatomy
Ontology termp-valuen
regional part of nervous system4.44e-2654
neural tube4.77e-2452
neural rod4.77e-2452
future spinal cord4.77e-2452
neural keel4.77e-2452
central nervous system4.00e-2373
neurectoderm1.09e-2264
neural plate1.09e-2264
presumptive neural plate1.09e-2264
nervous system5.00e-2275
gray matter3.57e-2034
brain1.33e-1947
future brain1.33e-1947
ecto-epithelium6.32e-1973
regional part of brain8.89e-1946
ectoderm-derived structure2.34e-1895
ectoderm2.34e-1895
presumptive ectoderm2.34e-1895
brain grey matter6.65e-1629
regional part of telencephalon6.65e-1629
telencephalon6.65e-1629
pre-chordal neural plate6.97e-1649
anterior neural tube3.22e-1540
structure with developmental contribution from neural crest1.69e-1492
regional part of forebrain2.86e-1439
forebrain2.86e-1439
future forebrain2.86e-1439
regional part of cerebral cortex5.66e-1117
occipital lobe4.78e-1010
visual cortex4.78e-1010
neocortex4.78e-1010
posterior neural tube6.10e-1012
chordal neural plate6.10e-1012
cerebral cortex2.34e-0921
cerebral hemisphere2.34e-0921
pallium2.34e-0921
basal ganglion2.38e-088
nuclear complex of neuraxis2.38e-088
aggregate regional part of brain2.38e-088
collection of basal ganglia2.38e-088
cerebral subcortex2.38e-088
spinal cord9.75e-076
dorsal region element9.75e-076
dorsum9.75e-076
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