Personal tools

FFCP PHASE1:Mm9::chr5:84846420..84846425,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr5:84846420..84846425,- |short_description=p4@Epha5 |description=CAGE_peak_4_at_Epha5_5end |association_with_transcript=-13bp_to_ENSMUST00000113411,ENSMUST000...")
 
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr5:84846420..84846425,-
|DHSsupport=NA
|short_description=p4@Epha5
|DPIdataset=NA
|description=CAGE_peak_4_at_Epha5_5end
|association_with_transcript=-13bp_to_ENSMUST00000113411,ENSMUST00000136775,ENSMUST00000155469,NM_007937,uc008xwv.2,uc008xww.1,uc008xwx.1,uc008xwy.1,uc008xwz.1,uc008xxa.1,uc008xxb.1_5end
|EntrezGene=13839
|EntrezGene=13839
|HGNC=
|HGNC=
|MCL_coexpression_id=1791
|TSSclassifier=NA
|UniProt=E9PUP7,Q60629,Q6PFV6,Q8C276,Q3V344,Q8CBY9
|UniProt=E9PUP7,Q60629,Q6PFV6,Q8C276,Q3V344,Q8CBY9
|association_with_transcript=-13bp_to_ENSMUST00000113411,ENSMUST00000136775,ENSMUST00000155469,NM_007937,uc008xwv.2,uc008xww.1,uc008xwx.1,uc008xwy.1,uc008xwz.1,uc008xxa.1,uc008xxb.1_5end
|cluster_id=chr5:84846420..84846425,-
|description=CAGE_peak_4_at_Epha5_5end
|id=chr5:84846420..84846425,-
|ontology_enrichment_celltype=CL:0000117!2.00e-15!23;CL:0000337!2.00e-15!23;CL:0000540!5.62e-11!33;CL:0000047!5.62e-11!33;CL:0000031!5.62e-11!33;CL:0000404!5.62e-11!33;CL:0000221!1.11e-08!44;CL:0000133!1.11e-08!44;CL:0002319!1.13e-08!43;CL:0000393!1.26e-07!39;CL:0000211!1.26e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000117,6.82e-25,23;CL:0000337,6.82e-25,23;CL:0000540,4.61e-17,33;CL:0000047,4.61e-17,33;CL:0000031,4.61e-17,33;CL:0000404,4.61e-17,33;CL:0000393,1.73e-13,39;CL:0000211,1.73e-13,39;CL:0002319,4.03e-13,43;CL:0000221,1.11e-12,44;CL:0000133,1.11e-12,44;CL:0002609,2.04e-10,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!8.48e-30!63;UBERON:0003056!1.02e-26!49;UBERON:0002346!1.56e-26!71;UBERON:0003075!1.56e-26!71;UBERON:0007284!1.56e-26!71;UBERON:0001049!5.17e-26!52;UBERON:0005068!5.17e-26!52;UBERON:0006241!5.17e-26!52;UBERON:0007135!5.17e-26!52;UBERON:0000955!4.27e-25!50;UBERON:0006238!4.27e-25!50;UBERON:0004121!7.39e-25!102;UBERON:0000924!7.39e-25!102;UBERON:0006601!7.39e-25!102;UBERON:0000073!1.05e-24!75;UBERON:0001016!1.05e-24!75;UBERON:0002616!3.42e-24!49;UBERON:0001017!8.37e-24!73;UBERON:0005743!8.37e-24!73;UBERON:0002020!1.19e-22!34;UBERON:0003080!1.54e-21!40;UBERON:0002780!6.11e-21!39;UBERON:0001890!6.11e-21!39;UBERON:0006240!6.11e-21!39;UBERON:0002791!1.08e-19!29;UBERON:0003528!1.08e-19!29;UBERON:0001893!1.08e-19!29;UBERON:0007811!9.36e-17!86;UBERON:0000153!2.19e-16!94;UBERON:0000956!7.96e-15!21;UBERON:0001869!7.96e-15!21;UBERON:0000203!7.96e-15!21;UBERON:0002619!1.08e-11!17;UBERON:0002021!6.81e-09!10;UBERON:0000411!6.81e-09!10;UBERON:0001950!6.81e-09!10
|ontology_enrichment_uberon_v019_2=UBERON:0002020,5.40e-40,34;UBERON:0003528,4.40e-36,29;UBERON:0002791,4.40e-36,29;UBERON:0001893,4.40e-36,29;UBERON:0002346,1.66e-34,64;UBERON:0003075,1.66e-34,64;UBERON:0007284,1.66e-34,64;UBERON:0003056,2.39e-34,49;UBERON:0000073,9.51e-33,54;UBERON:0001049,5.71e-32,52;UBERON:0005068,5.71e-32,52;UBERON:0006241,5.71e-32,52;UBERON:0007135,5.71e-32,52;UBERON:0001016,1.89e-31,75;UBERON:0004121,6.69e-31,95;UBERON:0000924,6.69e-31,95;UBERON:0006601,6.69e-31,95;UBERON:0001017,1.03e-30,73;UBERON:0003080,6.10e-30,40;UBERON:0002780,8.00e-29,39;UBERON:0001890,8.00e-29,39;UBERON:0006240,8.00e-29,39;UBERON:0010371,8.40e-29,73;UBERON:0000955,2.90e-28,47;UBERON:0006238,2.90e-28,47;UBERON:0002616,9.54e-27,46;UBERON:0000956,1.84e-26,21;UBERON:0001869,1.84e-26,21;UBERON:0000203,1.84e-26,21;UBERON:0010314,1.89e-20,92;UBERON:0002619,2.55e-20,17;UBERON:0002021,5.48e-16,10;UBERON:0000411,5.48e-16,10;UBERON:0001950,5.48e-16,10;UBERON:0002420,1.92e-10,8;UBERON:0007245,1.92e-10,8;UBERON:0010009,1.92e-10,8;UBERON:0010011,1.92e-10,8;UBERON:0000454,1.92e-10,8;UBERON:0000025,4.06e-09,114;UBERON:0004111,6.52e-08,122;UBERON:0000369,2.80e-07,5;UBERON:0002435,2.80e-07,5;UBERON:0000204,2.80e-07,5;UBERON:0010082,2.80e-07,5
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.58328969722285,0,0,0,0,0,0,0,0,1.61853168687678,1.05798195854407,1.90149421051854,0,0.889294796111139,0,0,0,0,0,6.22137673850866,3.78016627328734,4.20649922702764,1.71390590642282,1.54607978666129,3.91970557487853,2.58782771749238,7.35375029288017,3.30347642998166,0.766124028511126,2.61131106535614,1.71452174049252,1.28082701043374,3.12548022334056,2.23346399201105,1.12552522006336,1.83357897332172,5.59794312399969,2.27794689278565,0.559198337475902,0.227178579999552,3.77857800533928,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0,0.304465478312141,0,0.150722640552623,0.352766121407114,0,0,0,0,0.161766849947409,0,0,0,0.585561594023094,0.628340120440365,0,0,0,0,1.49790639404823,1.37250180845588,3.14135880282161,4.17178368461463,4.34716277461562,1.24672826735736,2.75810147215188,0.101839363850316,0,0,0.631325567659422,1.04096354370163,0.919608417733892,1.0803727788321,2.26057226753573,2.4493139694478,3.33095672740609,2.71735001223214,0.776110112217047,0,0.189106080167819,0.175951124163949,0,0.278047249225598,0.696504333044333,0.411564272815887,0,0,0,0,0,0,0,0.23674473558521,0.196764231747404,0,0,0,0,0,0,0,0,0,0,4.6263788684108,8.12946437796347,0,0,0,0.232236671860439,0,0,0,0.190225626112559,0,0.164698954724011,0,0,0.19496408711912,0,0,0,0.189667900953082,0,0,0,0.193952487167626,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.325929952884052,0.169745085775188,0.469380496577004,0.167506257441816,0.238043640886014,0.195133647857799,0,0,0.159454768657487,0,0,0,0,0,0,0,1.76605648986571,0.820481806145422,0,0,0,0,0,0,0.668396022247182,1.13230612315533,0.404810701674894,0,0,8.03303291054518,0.141940085208269,0.35613120733451,0,0,0,0.242780636154981,0,0,0.295301892880773,0,0,0,0,0,0,0,0.340439605753788,0.36012218806262,0,0.214337035031592,0.886701168211368,0.535106452806212,0.329098041204242,0.608929898229199,0,0,0,0,0.161464426695906,0.120625849856312,0,0,0,1.29797711407357,0,0,0,0,0,0,0,0.279902904647316,0.138199973804424,0,0.158167996790568,0.203319467126849,0.108005340821801,0.418176592028937,0,0.674321731924103,0,0,0,0,0,0,0,0,0,0.337912250981556,0.234714477291508,0.39061315453185,0,0,0,0,0.405450430580328,0,0,0,0.198681354781265,0,0,0,0.0762068066549998,0,0,0,0,0.680191150845634,0,0,0,0,0,0,0,0,2.82375921308533,2.30162618253588,5.72895513439397,3.26521046453006,4.7955776383945,3.0215755895588,6.07520250208625,4.95353323546643,3.17199686288943,7.24864436452548,0.103787347584177,1.19707462020309,0.512200817262403,0.486213434136588,0.628839487883947,0.551530525350042,0.44449345560323,0.618105171716683,0.64183841918363,0.252697211763798,1.01391719956096,1.13175804831646,0.655490552289177,0.832326981263301,0.918967503289812,1.42888107384922,0.811190281613988,0.964546102318525,0.412085900803307,0.441596760403192,1.02860775715625,0.532427418478012,0.715308569841963,0.726732083161643,1.2234219453993,1.09998990259179,0.548783918618318,0.526139422875686,1.7654534799962,0,1.18635018124174,0.886540341380071,0.818462086339379,0.77468420592983,1.15743966588685,1.49886346762768,0.467863216890817,0.214871054048298,0.57386499620653,0.441182838239031,0
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.58328969722285,0,0,0,0,0,0,0,0,1.61853168687678,1.05798195854407,1.90149421051854,0,0.889294796111139,0,0,0,0,0,6.22137673850866,3.78016627328734,4.20649922702764,1.71390590642282,1.54607978666129,3.91970557487853,2.58782771749238,7.35375029288017,3.30347642998166,0.766124028511126,2.61131106535614,1.71452174049252,1.28082701043374,3.12548022334056,2.23346399201105,1.12552522006336,1.83357897332172,5.59794312399969,2.27794689278565,0.559198337475902,0.227178579999552,3.77857800533928,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0,0.304465478312141,0,0.150722640552623,0.352766121407114,0,0,0,0,0.161766849947409,0,0,0,0.585561594023094,0.628340120440365,0,0,0,0,1.49790639404823,1.37250180845588,3.14135880282161,4.17178368461463,4.34716277461562,1.24672826735736,2.75810147215188,0.101839363850316,0,0,0.631325567659422,1.04096354370163,0.919608417733892,1.0803727788321,2.26057226753573,2.4493139694478,3.33095672740609,2.71735001223214,0.776110112217047,0,0.189106080167819,0.175951124163949,0,0.278047249225598,0.696504333044333,0.411564272815887,0,0,0,0,0,0,0,0.23674473558521,0.196764231747404,0,0,0,0,0,0,0,0,0,0,4.6263788684108,8.12946437796347,0,0,0,0.232236671860439,0,0,0,0.190225626112559,0,0.164698954724011,0,0,0.19496408711912,0,0,0,0.189667900953082,0,0,0,0.193952487167626,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.325929952884052,0.169745085775188,0.469380496577004,0.167506257441816,0.238043640886014,0.195133647857799,0,0,0.159454768657487,0,0,0,0,0,0,0,1.76605648986571,0.820481806145422,0,0,0,0,0,0,0.668396022247182,1.13230612315533,0.404810701674894,0,0,8.03303291054518,0.141940085208269,0.35613120733451,0,0,0,0.242780636154981,0,0,0.295301892880773,0,0,0,0,0,0,0,0.340439605753788,0.36012218806262,0,0.214337035031592,0.886701168211368,0.535106452806212,0.329098041204242,0.608929898229199,0,0,0,0,0.161464426695906,0.120625849856312,0,0,0,1.29797711407357,0,0,0,0,0,0,0,0.279902904647316,0.138199973804424,0,0.158167996790568,0.203319467126849,0.108005340821801,0.418176592028937,0,0.674321731924103,0,0,0,0,0,0,0,0,0,0.337912250981556,0.234714477291508,0.39061315453185,0,0,0,0,0.405450430580328,0,0,0,0.198681354781265,0,0,0,0.0762068066549998,0,0,0,0,0.680191150845634,0,0,0,0,0,0,0,0,2.82375921308533,2.30162618253588,5.72895513439397,3.26521046453006,4.7955776383945,3.0215755895588,6.07520250208625,4.95353323546643,3.17199686288943,7.24864436452548,0.103787347584177,1.19707462020309,0.512200817262403,0.486213434136588,0.628839487883947,0.551530525350042,0.44449345560323,0.618105171716683,0.64183841918363,0.252697211763798,1.01391719956096,1.13175804831646,0.655490552289177,0.832326981263301,0.918967503289812,1.42888107384922,0.811190281613988,0.964546102318525,0.412085900803307,0.441596760403192,1.02860775715625,0.532427418478012,0.715308569841963,0.726732083161643,1.2234219453993,1.09998990259179,0.548783918618318,0.526139422875686,1.7654534799962,0,1.18635018124174,0.886540341380071,0.818462086339379,0.77468420592983,1.15743966588685,1.49886346762768,0.467863216890817,0.214871054048298,0.57386499620653,0.441182838239031,0
|short_description=p4@Epha5
}}
}}

Latest revision as of 06:18, 26 September 2015

Short description:p4@Epha5
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Epha5_5end
Coexpression cluster:MCL_coexpression_mm9:1791
Association with transcript: -13bp_to_ENSMUST00000113411, ENSMUST00000136775, ENSMUST00000155469, NM_007937, uc008xwv.2, uc008xww.1, uc008xwx.1, uc008xwy.1, uc008xwz.1, uc008xxa.1, uc008xxb.1_5end
EntrezGene:Epha5
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Epha5

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.62
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D56.22
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.78
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.92
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.59
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D67.35
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.71
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.28
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.23
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.83
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.60
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F93.78
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.50
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F13.14
cortex, adult.CNhs10473.12-14D54.17
cortex, neonate N30.CNhs11107.1392-42F24.35
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B22.76
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C61.04
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C91.08
eyeball, embryo E17.CNhs11023.1261-18D42.26
eyeball, neonate N00.CNhs11207.633-15C62.45
eyeball, neonate N01.CNhs11140.1532-43E73.33
eyeball, neonate N02.CNhs11205.1551-44G82.72
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E84.63
hippocampus, neonate N00.CNhs11228.627-43G18.13
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.77
medulla oblongata, neonate N30.CNhs11200.1396-42A30.82
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I98.03
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.30
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.73
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.27
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.95
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A97.25
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.92
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gray matter5.40e-4034
brain grey matter4.40e-3629
regional part of telencephalon4.40e-3629
telencephalon4.40e-3629
neurectoderm1.66e-3464
neural plate1.66e-3464
presumptive neural plate1.66e-3464
pre-chordal neural plate2.39e-3449
regional part of nervous system9.51e-3354
neural tube5.71e-3252
neural rod5.71e-3252
future spinal cord5.71e-3252
neural keel5.71e-3252
nervous system1.89e-3175
ectoderm-derived structure6.69e-3195
ectoderm6.69e-3195
presumptive ectoderm6.69e-3195
central nervous system1.03e-3073
anterior neural tube6.10e-3040
regional part of forebrain8.00e-2939
forebrain8.00e-2939
future forebrain8.00e-2939
ecto-epithelium8.40e-2973
brain2.90e-2847
future brain2.90e-2847
regional part of brain9.54e-2746
cerebral cortex1.84e-2621
cerebral hemisphere1.84e-2621
pallium1.84e-2621
structure with developmental contribution from neural crest1.89e-2092
regional part of cerebral cortex2.55e-2017
occipital lobe5.48e-1610
visual cortex5.48e-1610
neocortex5.48e-1610
basal ganglion1.92e-108
nuclear complex of neuraxis1.92e-108
aggregate regional part of brain1.92e-108
collection of basal ganglia1.92e-108
cerebral subcortex1.92e-108
tube4.06e-09114
anatomical conduit6.52e-08122
corpus striatum2.80e-075
striatum2.80e-075
ventral part of telencephalon2.80e-075
future corpus striatum2.80e-075
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr5:84846420..84846425,-&oldid=4237813"