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FFCP PHASE1:Mm9::chr9:44128444..44128463,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr9:44128444..44128463,-
|DHSsupport=NA
|short_description=p2@C2cd2l
|DPIdataset=NA
|description=CAGE_peak_2_at_C2cd2l_5end
|association_with_transcript=-79bp_to_ENSMUST00000065080,ENSMUST00000085976,NM_027909,uc009pct.1,uc009pcu.1_5end
|EntrezGene=71764
|EntrezGene=71764
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=G5E8D9,E9PZE4,Q3U590,Q9DBJ2,Q8CAA2
|UniProt=G5E8D9,E9PZE4,Q3U590,Q9DBJ2,Q8CAA2
|association_with_transcript=-79bp_to_ENSMUST00000065080,ENSMUST00000085976,NM_027909,uc009pct.1,uc009pcu.1_5end
|cluster_id=chr9:44128444..44128463,-
|description=CAGE_peak_2_at_C2cd2l_5end
|id=chr9:44128444..44128463,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000117,6.24e-09,23;CL:0000337,6.24e-09,23;CL:0002610,5.33e-07,3;CL:0002614,9.82e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!8.59e-19!63;UBERON:0001017!1.21e-18!73;UBERON:0005743!1.21e-18!73;UBERON:0000073!1.44e-18!75;UBERON:0001016!1.44e-18!75;UBERON:0002346!3.92e-18!71;UBERON:0003075!3.92e-18!71;UBERON:0007284!3.92e-18!71;UBERON:0001049!3.28e-17!52;UBERON:0005068!3.28e-17!52;UBERON:0006241!3.28e-17!52;UBERON:0007135!3.28e-17!52;UBERON:0000955!3.88e-17!50;UBERON:0006238!3.88e-17!50;UBERON:0004121!5.61e-17!102;UBERON:0000924!5.61e-17!102;UBERON:0006601!5.61e-17!102;UBERON:0002616!1.94e-16!49;UBERON:0003056!4.62e-14!49;UBERON:0003080!1.20e-11!40;UBERON:0002780!5.46e-11!39;UBERON:0001890!5.46e-11!39;UBERON:0006240!5.46e-11!39;UBERON:0007811!2.15e-10!86;UBERON:0002020!5.04e-10!34;UBERON:0000153!3.80e-09!94;UBERON:0002791!3.46e-08!29;UBERON:0003528!3.46e-08!29;UBERON:0001893!3.46e-08!29;UBERON:0002021!2.00e-07!10;UBERON:0000411!2.00e-07!10;UBERON:0001950!2.00e-07!10;UBERON:0000025!7.91e-07!114
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.48e-27,54;UBERON:0001017,8.60e-27,73;UBERON:0001016,7.31e-26,75;UBERON:0000955,3.20e-25,47;UBERON:0006238,3.20e-25,47;UBERON:0001049,4.62e-24,52;UBERON:0005068,4.62e-24,52;UBERON:0006241,4.62e-24,52;UBERON:0007135,4.62e-24,52;UBERON:0003056,9.28e-24,49;UBERON:0002616,1.53e-23,46;UBERON:0002346,1.69e-23,64;UBERON:0003075,1.69e-23,64;UBERON:0007284,1.69e-23,64;UBERON:0003080,2.69e-23,40;UBERON:0004121,3.07e-23,95;UBERON:0000924,3.07e-23,95;UBERON:0006601,3.07e-23,95;UBERON:0002780,1.56e-21,39;UBERON:0001890,1.56e-21,39;UBERON:0006240,1.56e-21,39;UBERON:0010371,1.08e-19,73;UBERON:0003528,1.17e-19,29;UBERON:0002791,1.17e-19,29;UBERON:0001893,1.17e-19,29;UBERON:0002020,2.76e-18,34;UBERON:0002021,3.99e-16,10;UBERON:0000411,3.99e-16,10;UBERON:0001950,3.99e-16,10;UBERON:0010314,4.10e-14,92;UBERON:0002619,8.47e-13,17;UBERON:0000956,3.91e-12,21;UBERON:0001869,3.91e-12,21;UBERON:0000203,3.91e-12,21;UBERON:0002420,4.42e-09,8;UBERON:0007245,4.42e-09,8;UBERON:0010009,4.42e-09,8;UBERON:0010011,4.42e-09,8;UBERON:0000454,4.42e-09,8;UBERON:0002950,6.21e-09,4;UBERON:0001891,6.21e-09,4;UBERON:0009616,6.21e-09,4;UBERON:0010286,6.21e-09,4;UBERON:0000025,3.87e-08,114;UBERON:0011216,1.28e-07,194;UBERON:0004111,3.52e-07,122;UBERON:0004684,5.33e-07,3;UBERON:0002275,5.33e-07,3;UBERON:0002038,9.82e-07,3;UBERON:0009663,9.82e-07,3;UBERON:0009661,9.82e-07,3;UBERON:0000125,9.82e-07,3;UBERON:0002308,9.82e-07,3
|phase1_expression=0.480446541314382,1.04692622291808,1.81999695755814,0.90739263392049,1.50268718983904,0.16787927191189,0.467225281191051,0,0.140788722151667,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.159992422793407,0.22940928106717,0,0.430761996159075,0.215471232685889,0.380046838912748,0.504060259519861,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0,0.782391344348039,0.872100625521786,0,0.194429899074283,0.419959264876088,0,0.335565212115473,0,0,0.257259436035947,0,0,1.82084814773638,0.528990979272033,1.26766280701236,0,0,0.449949858640699,0,0,0.299600110518405,1.53687322128622,0.207379224616955,0,0,2.28520787523043,0.662605622854841,0.489963196859816,0.383381884072945,0,1.10115880999389,1.91531007127782,3.22573719838111,1.84640802822271,2.19570344645783,0,1.3959149950069,1.12552522006336,3.66715794664344,0.883885756421003,0.569486723196412,0.372798891650601,0.302904773332736,0.151143120213571,0.289864488701678,0,0,1.07940638327563,0.649776417447669,0.448026887097336,0.280888840263504,0.340860645156116,0,0,0.563373679106722,0,0,0,0.216491041011214,0,0,0.11418387971906,0,0.445326417194474,0,0,0,0.452167921657868,0.587943535678524,0.376999773989026,0,0.144599356919912,0,0,0,0,0,1.46390398505774,0.83778682725382,0.255457055208591,0,0,0.381210681219194,4.04434726393021,1.83000241127451,0.376963056338593,3.82413504423008,2.04572365864264,3.74018480207208,2.75810147215188,0.305518091550949,0,0,1.26265113531884,0.260240885925407,0,0.540186389416048,0.452114453507145,1.56483948048054,0.640568601424249,0.937017245597288,2.84573707812917,0.431135985865684,0.189106080167819,0.175951124163949,0,0,0.348252166522167,0,0,0,0.257347907114715,0,0.414251545071004,0,0.180062061461015,0,0,0.154267112887378,0,0.536546802799238,0.116765342367169,0.329119699826961,0.656669856316381,0.162137619091711,0,0.219550115291051,0,1.47202963994889,1.02904612379284,0,0,0.213288250535234,0,0.128867461322093,0,0,0.570676878337677,0,0.164698954724011,0.251335208800269,0,0,0,0.216138049874694,0,0,0.114248512609729,0,0.203651327845314,0.387904974335251,0.350679099451593,0.252946148497029,0,0,0,0,0.166845105716094,0.196558995113203,0,0.405720242777006,0,0,0,0.162135226775035,0.274561413188081,0,0.372140947668503,0,0,0.179397413521912,0.482443521363367,0,0.37898282354097,0.162964976442026,0,0.234690248288502,0,0,0.585400943573396,0,0,0.637819074629948,0,0,0.144649058581512,0,0,0,0.275936746304732,1.9266070798535,0.937693492737625,0.163934945376675,0,0,0.390438744296638,0.215423397732799,0,0,0.283076530788832,0,0.584511715822624,0,2.89189184779626,0,0.35613120733451,0.325773918707152,0.494910368917606,0,0,0.302323556964751,0.377210159511796,0.885905678642318,0.614870295887855,0,0.727067458955011,0,0,1.05418608574999,0,1.70219802876894,0.18006109403131,0.129358683782755,0.857348140126369,0.709360934569094,0.178368817602071,0.493647061806363,1.522324745573,0.23467170806371,0.42366414172764,0.220528398054962,0.32977250588296,0,0.0603129249281559,0,0,0.874442509889552,1.48340241608408,0,0.206386867963223,0.185194527369712,0,0,0.228778173206523,0,0.279902904647316,0,0,0,0,0,0.209088296014469,0.436725127492355,0.134864346384821,0.165306911450672,0.523511883968059,0.129614973291793,0,0,0.149516546043979,0,0,0.129159823477731,0.337912250981556,0,0.5208175393758,0.734015410979976,0,0.288030006257865,0,0,0.102710957164827,0,0.358053391334963,0.596044064343795,0.120195449519969,0,0.100966449948148,0.0762068066549998,0.201652370273681,0,0.0962118416403295,0,0,0,0,0,0,0,0.183151624267265,0,0.501572104035363,1.6942555278512,2.30162618253588,1.14579102687879,1.3748254587495,1.37016503954128,3.0215755895588,0.675022500231806,2.2516060161211,4.53142408984205,2.07104124700728,0.103787347584177,0.798049746802062,0.682934423016537,0.243106717068294,0.209613162627982,0,0.222246727801615,0.824140228955577,0.320919209591815,0.758091635291392,0,0,0.0936415074698824,0.320125762024346,0.114870937911227,0.476293691283074,0.579421629724277,0,0,0.147198920134397,0.342869252385415,0.354951612318675,0.953744759789284,0,0.0941093804153306,0.507687647350059,0.182927972872773,0,0.271608227691724,1.68342681497322,0.237270036248348,0.29551344712669,0,0,0.192906610981141,0.499621155875892,0,0.214871054048298,0.382576664137687,0,0.231867835620421
|phase1_expression=0.480446541314382,1.04692622291808,1.81999695755814,0.90739263392049,1.50268718983904,0.16787927191189,0.467225281191051,0,0.140788722151667,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.159992422793407,0.22940928106717,0,0.430761996159075,0.215471232685889,0.380046838912748,0.504060259519861,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0,0.782391344348039,0.872100625521786,0,0.194429899074283,0.419959264876088,0,0.335565212115473,0,0,0.257259436035947,0,0,1.82084814773638,0.528990979272033,1.26766280701236,0,0,0.449949858640699,0,0,0.299600110518405,1.53687322128622,0.207379224616955,0,0,2.28520787523043,0.662605622854841,0.489963196859816,0.383381884072945,0,1.10115880999389,1.91531007127782,3.22573719838111,1.84640802822271,2.19570344645783,0,1.3959149950069,1.12552522006336,3.66715794664344,0.883885756421003,0.569486723196412,0.372798891650601,0.302904773332736,0.151143120213571,0.289864488701678,0,0,1.07940638327563,0.649776417447669,0.448026887097336,0.280888840263504,0.340860645156116,0,0,0.563373679106722,0,0,0,0.216491041011214,0,0,0.11418387971906,0,0.445326417194474,0,0,0,0.452167921657868,0.587943535678524,0.376999773989026,0,0.144599356919912,0,0,0,0,0,1.46390398505774,0.83778682725382,0.255457055208591,0,0,0.381210681219194,4.04434726393021,1.83000241127451,0.376963056338593,3.82413504423008,2.04572365864264,3.74018480207208,2.75810147215188,0.305518091550949,0,0,1.26265113531884,0.260240885925407,0,0.540186389416048,0.452114453507145,1.56483948048054,0.640568601424249,0.937017245597288,2.84573707812917,0.431135985865684,0.189106080167819,0.175951124163949,0,0,0.348252166522167,0,0,0,0.257347907114715,0,0.414251545071004,0,0.180062061461015,0,0,0.154267112887378,0,0.536546802799238,0.116765342367169,0.329119699826961,0.656669856316381,0.162137619091711,0,0.219550115291051,0,1.47202963994889,1.02904612379284,0,0,0.213288250535234,0,0.128867461322093,0,0,0.570676878337677,0,0.164698954724011,0.251335208800269,0,0,0,0.216138049874694,0,0,0.114248512609729,0,0.203651327845314,0.387904974335251,0.350679099451593,0.252946148497029,0,0,0,0,0.166845105716094,0.196558995113203,0,0.405720242777006,0,0,0,0.162135226775035,0.274561413188081,0,0.372140947668503,0,0,0.179397413521912,0.482443521363367,0,0.37898282354097,0.162964976442026,0,0.234690248288502,0,0,0.585400943573396,0,0,0.637819074629948,0,0,0.144649058581512,0,0,0,0.275936746304732,1.9266070798535,0.937693492737625,0.163934945376675,0,0,0.390438744296638,0.215423397732799,0,0,0.283076530788832,0,0.584511715822624,0,2.89189184779626,0,0.35613120733451,0.325773918707152,0.494910368917606,0,0,0.302323556964751,0.377210159511796,0.885905678642318,0.614870295887855,0,0.727067458955011,0,0,1.05418608574999,0,1.70219802876894,0.18006109403131,0.129358683782755,0.857348140126369,0.709360934569094,0.178368817602071,0.493647061806363,1.522324745573,0.23467170806371,0.42366414172764,0.220528398054962,0.32977250588296,0,0.0603129249281559,0,0,0.874442509889552,1.48340241608408,0,0.206386867963223,0.185194527369712,0,0,0.228778173206523,0,0.279902904647316,0,0,0,0,0,0.209088296014469,0.436725127492355,0.134864346384821,0.165306911450672,0.523511883968059,0.129614973291793,0,0,0.149516546043979,0,0,0.129159823477731,0.337912250981556,0,0.5208175393758,0.734015410979976,0,0.288030006257865,0,0,0.102710957164827,0,0.358053391334963,0.596044064343795,0.120195449519969,0,0.100966449948148,0.0762068066549998,0.201652370273681,0,0.0962118416403295,0,0,0,0,0,0,0,0.183151624267265,0,0.501572104035363,1.6942555278512,2.30162618253588,1.14579102687879,1.3748254587495,1.37016503954128,3.0215755895588,0.675022500231806,2.2516060161211,4.53142408984205,2.07104124700728,0.103787347584177,0.798049746802062,0.682934423016537,0.243106717068294,0.209613162627982,0,0.222246727801615,0.824140228955577,0.320919209591815,0.758091635291392,0,0,0.0936415074698824,0.320125762024346,0.114870937911227,0.476293691283074,0.579421629724277,0,0,0.147198920134397,0.342869252385415,0.354951612318675,0.953744759789284,0,0.0941093804153306,0.507687647350059,0.182927972872773,0,0.271608227691724,1.68342681497322,0.237270036248348,0.29551344712669,0,0,0.192906610981141,0.499621155875892,0,0.214871054048298,0.382576664137687,0,0.231867835620421
|short_description=p2@C2cd2l
}}
}}

Latest revision as of 16:46, 26 September 2015

Short description:p2@C2cd2l
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_C2cd2l_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -79bp_to_ENSMUST00000065080, ENSMUST00000085976, NM_027909, uc009pct.1, uc009pcu.1_5end
EntrezGene:C2cd2l
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@C2cd2l

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.82
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.92
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.85
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.20
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.67
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A44.04
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D53.82
cortex, neonate N30.CNhs11107.1392-42F22.05
diencephalon, adult.CNhs10482.20-12F23.74
diencephalon, neonate N30.CNhs11201.1388-42B22.76
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C61.56
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A22.85
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E81.47
hippocampus, neonate N00.CNhs11228.627-43G11.03
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C21.93
medulla oblongata, neonate N30.CNhs11200.1396-42A30.94
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I92.89
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C91.48
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.73
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.11
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)6.24e-0923
neuroblast (sensu Vertebrata)6.24e-0923
raphe nuclei neuron5.33e-073
neuron of the substantia nigra9.82e-073

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.48e-2754
central nervous system8.60e-2773
nervous system7.31e-2675
brain3.20e-2547
future brain3.20e-2547
neural tube4.62e-2452
neural rod4.62e-2452
future spinal cord4.62e-2452
neural keel4.62e-2452
pre-chordal neural plate9.28e-2449
regional part of brain1.53e-2346
neurectoderm1.69e-2364
neural plate1.69e-2364
presumptive neural plate1.69e-2364
anterior neural tube2.69e-2340
ectoderm-derived structure3.07e-2395
ectoderm3.07e-2395
presumptive ectoderm3.07e-2395
regional part of forebrain1.56e-2139
forebrain1.56e-2139
future forebrain1.56e-2139
ecto-epithelium1.08e-1973
brain grey matter1.17e-1929
regional part of telencephalon1.17e-1929
telencephalon1.17e-1929
gray matter2.76e-1834
occipital lobe3.99e-1610
visual cortex3.99e-1610
neocortex3.99e-1610
structure with developmental contribution from neural crest4.10e-1492
regional part of cerebral cortex8.47e-1317
cerebral cortex3.91e-1221
cerebral hemisphere3.91e-1221
pallium3.91e-1221
basal ganglion4.42e-098
nuclear complex of neuraxis4.42e-098
aggregate regional part of brain4.42e-098
collection of basal ganglia4.42e-098
cerebral subcortex4.42e-098
regional part of midbrain6.21e-094
midbrain6.21e-094
presumptive midbrain6.21e-094
midbrain neural tube6.21e-094
tube3.87e-08114
organ system subdivision1.28e-07194
anatomical conduit3.52e-07122
raphe nuclei5.33e-073
reticular formation5.33e-073
substantia nigra9.82e-073
telencephalic nucleus9.82e-073
midbrain nucleus9.82e-073
neural nucleus9.82e-073
nucleus of brain9.82e-073
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