FFCP PHASE1:Hg19::chr11:67210930..67210974,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:67210930..67210974,- to FFCP PHASE1:Hg19::chr11:67210930..67210974,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57175 | |EntrezGene=57175 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2253 | |HGNC=2253 | ||
|TSSclassifier=strong | |||
|UniProt=E7EW44,F5H0D2 | |UniProt=E7EW44,F5H0D2 | ||
|association_with_transcript=0bp_to_ENST00000393886,ENST00000453768,ENST00000545016,uc009yrs.1_5end | |||
|cluster_id=chr11:67210930..67210974,- | |||
|coexpression_cluster_id=C345 | |||
|description=CAGE_peak_1_at_CORO1B_5end | |||
|id=chr11:67210930..67210974,- | |||
|ontology_enrichment_celltype=CL:0000548!1.92e-31!679;CL:0000004!1.92e-31!679;CL:0000255!1.92e-31!679;CL:0000012!1.97e-30!682;CL:0002321!9.31e-28!248;CL:0000220!1.32e-27!246;CL:0002371!8.21e-27!591;CL:0000144!1.74e-26!625;CL:0000222!1.36e-23!119;CL:0000055!1.44e-21!180;CL:0000066!2.92e-17!254;CL:0000183!6.03e-16!59;CL:0000003!6.22e-16!722;CL:0000192!3.59e-15!42;CL:0000514!3.59e-15!42;CL:0000115!1.83e-13!35;CL:0000680!1.97e-13!57;CL:0000056!1.97e-13!57;CL:0000355!1.97e-13!57;CL:0000187!2.37e-13!54;CL:0002078!1.82e-12!44;CL:0000359!5.95e-12!32;CL:0000063!1.19e-11!578;CL:0000393!4.96e-11!60;CL:0000211!4.96e-11!60;CL:1000449!1.03e-09!16;CL:0000213!1.60e-09!57;CL:0000215!1.60e-09!57;CL:0002681!2.92e-08!13;CL:0002584!2.92e-08!13;CL:1000497!3.17e-08!18;CL:0002518!3.17e-08!18;CL:0002139!3.33e-08!24;CL:0000057!9.04e-08!75;CL:1000507!1.54e-07!12;CL:1000494!1.54e-07!12;CL:0000071!2.27e-07!18;CL:0002546!2.27e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000115;6.85e-12;36!CL:0000359;2.15e-11;32!CL:0000192;3.69e-11;43!CL:1000449;1.78e-09;15!CL:0002078;2.92e-09;45!CL:0002139;3.30e-08;24!CL:0002681;4.98e-08;12!CL:0002584;4.98e-08;12!CL:1000497;5.96e-08;17!CL:0002518;5.96e-08;17!CL:0000187;2.19e-07;55!CL:0000071;2.25e-07;18!CL:1000507;6.94e-07;10!CL:1000494;6.94e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.68e-28,250;CL:0000222,2.45e-24,121;CL:0000066,5.31e-17,253;CL:0000192,1.85e-15,43;CL:0000514,1.85e-15,43;CL:0000115,6.81e-14,36;CL:0000680,1.01e-13,58;CL:0000056,1.01e-13,58;CL:0000355,1.01e-13,58;CL:0000187,1.22e-13,55;CL:0002078,7.02e-13,45;CL:0000359,5.94e-12,32;CL:0000393,2.63e-11,61;CL:0000211,2.63e-11,61;CL:0000213,6.94e-10,58;CL:0000215,6.94e-10,58;CL:1000449,1.78e-09,15;CL:0002139,3.33e-08,24;CL:0002681,5.01e-08,12;CL:0002584,5.01e-08,12;CL:1000497,5.90e-08,17;CL:0002518,5.90e-08,17;CL:0000057,1.54e-07,76;CL:0000071,2.27e-07,18;CL:0002546,2.27e-07,18;CL:1000507,6.97e-07,10;CL:1000494,6.97e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000514;3.69e-11;43!CL:0000355;1.52e-07;58!CL:0002546;2.25e-07;18!CL:0000222;3.97e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!2.27e-18!448;UBERON:0004120!2.27e-18!448;UBERON:0006603!2.27e-18!448;UBERON:0002049!2.63e-18!79;UBERON:0007798!2.63e-18!79;UBERON:0003914!2.98e-18!118;UBERON:0000468!1.93e-17!659;UBERON:0000055!6.75e-16!69;UBERON:0005256!1.02e-15!143;UBERON:0002100!1.08e-15!216;UBERON:0001637!7.93e-15!42;UBERON:0003509!7.93e-15!42;UBERON:0004572!7.93e-15!42;UBERON:0001981!8.43e-15!60;UBERON:0007500!8.43e-15!60;UBERON:0004537!8.43e-15!60;UBERON:0006965!8.43e-15!60;UBERON:0004872!2.01e-14!84;UBERON:0000486!1.85e-13!82;UBERON:0000914!5.40e-13!83;UBERON:0002329!5.40e-13!83;UBERON:0003077!5.40e-13!83;UBERON:0003059!5.40e-13!83;UBERON:0007282!5.40e-13!83;UBERON:0009618!5.40e-13!83;UBERON:0007285!5.40e-13!83;UBERON:0000467!9.95e-13!625;UBERON:0004290!1.69e-12!70;UBERON:0000480!2.18e-12!626;UBERON:0000490!2.56e-12!138;UBERON:0004573!1.47e-11!33;UBERON:0004571!1.47e-11!33;UBERON:0000922!2.20e-11!612;UBERON:0000923!4.24e-11!604;UBERON:0005291!4.24e-11!604;UBERON:0006598!4.24e-11!604;UBERON:0002532!4.24e-11!604;UBERON:0002050!4.33e-11!605;UBERON:0005423!4.33e-11!605;UBERON:0004535!5.56e-11!110;UBERON:0003081!6.11e-11!216;UBERON:0001134!9.00e-11!61;UBERON:0002036!9.00e-11!61;UBERON:0003082!9.00e-11!61;UBERON:0003104!1.20e-10!238;UBERON:0009142!1.20e-10!238;UBERON:0002385!1.59e-10!63;UBERON:0001015!1.59e-10!63;UBERON:0000383!1.59e-10!63;UBERON:0001009!6.77e-10!113;UBERON:0004211!1.03e-09!16;UBERON:0001285!1.03e-09!16;UBERON:0007684!1.03e-09!16;UBERON:0003220!1.03e-09!16;UBERON:0004208!1.03e-09!16;UBERON:0006555!1.54e-09!17;UBERON:0005103!1.54e-09!17;UBERON:0000083!1.54e-09!17;UBERON:0009201!1.54e-09!17;UBERON:0004819!1.54e-09!17;UBERON:0006553!1.54e-09!17;UBERON:0003074!1.54e-09!17;UBERON:0003060!1.54e-09!17;UBERON:0000080!5.67e-09!18;UBERON:0002120!5.67e-09!18;UBERON:0004875!5.67e-09!18;UBERON:0005721!5.67e-09!18;UBERON:0005754!5.67e-09!18;UBERON:0007297!5.67e-09!18;UBERON:0009569!1.38e-08!113;UBERON:0002204!1.90e-08!167;UBERON:0001225!2.92e-08!13;UBERON:0008987!2.92e-08!13;UBERON:0000353!6.00e-08!17;UBERON:0004876!6.56e-08!20;UBERON:0003887!8.11e-08!21;UBERON:0009773!1.54e-07!12;UBERON:0001231!1.54e-07!12;UBERON:0004810!1.54e-07!12;UBERON:0001986!2.27e-07!18;UBERON:0004638!2.27e-07!18;UBERON:0004852!2.27e-07!18;UBERON:0000475!4.56e-07!365;UBERON:0000947!6.52e-07!21;UBERON:0010191!6.52e-07!21;UBERON:0000119!8.84e-07!312;UBERON:0000483!9.93e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;7.88e-11;42!UBERON:0003509;7.88e-11;42!UBERON:0004572;7.88e-11;42!UBERON:0003914;9.82e-11;74!UBERON:0004573;1.46e-10;33!UBERON:0004571;1.46e-10;33!UBERON:0007500;4.23e-10;56!UBERON:0001981;4.23e-10;56!UBERON:0004537;4.23e-10;56!UBERON:0006555;1.78e-09;15!UBERON:0004819;1.78e-09;15!UBERON:0001285;1.78e-09;15!UBERON:0007684;1.78e-09;15!UBERON:0000055;3.62e-09;65!UBERON:0002049;1.19e-08;75!UBERON:0007798;1.19e-08;75!UBERON:0000353;1.98e-08;15!UBERON:0001225;4.98e-08;12!UBERON:0008987;4.98e-08;12!UBERON:0000025;1.26e-07;93!UBERON:0004638;2.25e-07;18!UBERON:0001986;2.25e-07;18!UBERON:0004852;2.25e-07;18!UBERON:0000947;6.54e-07;21!UBERON:0010191;6.54e-07;21!UBERON:0004211;6.94e-07;10!UBERON:0009773;6.94e-07;10!UBERON:0001231;6.94e-07;10!UBERON:0004810;6.94e-07;10 | |||
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| ||
|short_description=p1@CORO1B | |||
}} | }} |
Latest revision as of 18:21, 19 September 2015
Short description: | p1@CORO1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CORO1B_5end |
Coexpression cluster: | C345_Mesenchymal_Fibroblast_Alveolar_Renal_Pericytes_Hepatic_Smooth |
Association with transcript: | 0bp_to_ENST00000393886, ENST00000453768, ENST00000545016, uc009yrs.1_5end |
EntrezGene: | CORO1B |
HGNC: | 2253 |
UniProt: | E7EW44F5H0D2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.68e-28 | 250 |
mesodermal cell | 2.45e-24 | 121 |
epithelial cell | 5.31e-17 | 253 |
smooth muscle cell | 1.85e-15 | 43 |
smooth muscle myoblast | 1.85e-15 | 43 |
endothelial cell | 6.81e-14 | 36 |
muscle precursor cell | 1.01e-13 | 58 |
myoblast | 1.01e-13 | 58 |
multi-potent skeletal muscle stem cell | 1.01e-13 | 58 |
muscle cell | 1.22e-13 | 55 |
meso-epithelial cell | 7.02e-13 | 45 |
vascular associated smooth muscle cell | 5.94e-12 | 32 |
electrically responsive cell | 2.63e-11 | 61 |
electrically active cell | 2.63e-11 | 61 |
lining cell | 6.94e-10 | 58 |
barrier cell | 6.94e-10 | 58 |
epithelial cell of nephron | 1.78e-09 | 15 |
endothelial cell of vascular tree | 3.33e-08 | 24 |
kidney cortical cell | 5.01e-08 | 12 |
renal cortical epithelial cell | 5.01e-08 | 12 |
kidney cell | 5.90e-08 | 17 |
kidney epithelial cell | 5.90e-08 | 17 |
fibroblast | 1.54e-07 | 76 |
blood vessel endothelial cell | 2.27e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.27e-07 | 18 |
kidney tubule cell | 6.97e-07 | 10 |
nephron tubule epithelial cell | 6.97e-07 | 10 |