FFCP PHASE1:Hg19::chr1:113246314..113246331,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:113246314..113246331,- to FFCP PHASE1:Hg19::chr1:113246314..113246331,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=389 | |EntrezGene=389 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=669 | |HGNC=669 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-39bp_to_ENST00000473074_5end | |||
|cluster_id=chr1:113246314..113246331,- | |||
|description=CAGE_peak_6_at_RHOC_5end | |||
|id=chr1:113246314..113246331,- | |||
|ontology_enrichment_celltype=CL:0000222!2.90e-24!119;CL:0000220!1.30e-20!246;CL:0002321!8.67e-20!248;CL:0000055!1.53e-15!180;CL:0000144!8.84e-14!625;CL:0002371!1.88e-13!591;CL:0000183!2.82e-13!59;CL:0000680!6.71e-13!57;CL:0000056!6.71e-13!57;CL:0000355!6.71e-13!57;CL:0000548!1.71e-12!679;CL:0000004!1.71e-12!679;CL:0000255!1.71e-12!679;CL:0000187!3.03e-12!54;CL:0000192!3.86e-12!42;CL:0000514!3.86e-12!42;CL:0000012!1.03e-11!682;CL:0000393!3.96e-11!60;CL:0000211!3.96e-11!60;CL:0000359!4.70e-11!32;CL:0000213!3.25e-10!57;CL:0000215!3.25e-10!57;CL:0002078!4.81e-09!44;CL:0000057!1.97e-08!75;CL:0000115!6.52e-08!35;CL:0000066!1.42e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.43e-11;32!CL:0000192;1.26e-08;43!CL:0000115;1.78e-07;36!CL:0002078;2.49e-07;45!CL:0000187;3.60e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.08e-24,121;CL:0002321,2.54e-20,250;CL:0000680,6.23e-13,58;CL:0000056,6.23e-13,58;CL:0000355,6.23e-13,58;CL:0000192,1.82e-12,43;CL:0000514,1.82e-12,43;CL:0000187,2.89e-12,55;CL:0000359,2.40e-11,32;CL:0000213,4.35e-10,58;CL:0000215,4.35e-10,58;CL:0002078,7.13e-10,45;CL:0000393,7.32e-10,61;CL:0000211,7.32e-10,61;CL:0000115,6.77e-09,36;CL:0000057,2.85e-07,76 | |||
|ontology_enrichment_development_v019=CL:0000514;1.26e-08;43!CL:0000222;5.46e-07;121!CL:0000355;7.66e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!4.86e-17!79;UBERON:0007798!4.86e-17!79;UBERON:0004872!5.65e-17!84;UBERON:0005256!7.80e-17!143;UBERON:0003914!1.25e-16!118;UBERON:0000055!1.37e-14!69;UBERON:0001981!2.61e-14!60;UBERON:0007500!2.61e-14!60;UBERON:0004537!2.61e-14!60;UBERON:0006965!2.61e-14!60;UBERON:0000914!3.64e-14!83;UBERON:0002329!3.64e-14!83;UBERON:0003077!3.64e-14!83;UBERON:0003059!3.64e-14!83;UBERON:0007282!3.64e-14!83;UBERON:0009618!3.64e-14!83;UBERON:0007285!3.64e-14!83;UBERON:0000490!2.51e-13!138;UBERON:0000486!3.08e-13!82;UBERON:0004290!3.09e-13!70;UBERON:0001637!3.84e-13!42;UBERON:0003509!3.84e-13!42;UBERON:0004572!3.84e-13!42;UBERON:0002100!1.83e-12!216;UBERON:0001009!4.20e-12!113;UBERON:0004535!5.73e-12!110;UBERON:0001134!3.37e-11!61;UBERON:0002036!3.37e-11!61;UBERON:0003082!3.37e-11!61;UBERON:0002385!5.17e-11!63;UBERON:0001015!5.17e-11!63;UBERON:0000383!5.17e-11!63;UBERON:0004573!1.60e-09!33;UBERON:0004571!1.60e-09!33;UBERON:0000119!1.46e-08!312;UBERON:0000483!2.14e-08!309;UBERON:0000468!3.92e-08!659;UBERON:0000926!4.24e-08!448;UBERON:0004120!4.24e-08!448;UBERON:0006603!4.24e-08!448;UBERON:0000475!1.33e-07!365;UBERON:0000477!2.39e-07!286;UBERON:0000480!3.70e-07!626;UBERON:0000467!3.80e-07!625;UBERON:0003104!7.96e-07!238;UBERON:0009142!7.96e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;3.44e-10;42!UBERON:0003509;3.44e-10;42!UBERON:0004572;3.44e-10;42!UBERON:0007500;1.14e-08;56!UBERON:0001981;1.14e-08;56!UBERON:0004537;1.14e-08;56!UBERON:0003914;1.41e-08;74!UBERON:0004573;1.45e-08;33!UBERON:0004571;1.45e-08;33!UBERON:0002049;2.53e-07;75!UBERON:0007798;2.53e-07;75!UBERON:0000055;3.42e-07;65!UBERON:0000353;6.16e-07;15 | |||
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| ||
|short_description=p6@RHOC | |||
}} | }} |
Latest revision as of 05:04, 16 September 2015
Short description: | p6@RHOC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_RHOC_5end |
Coexpression cluster: | NA |
Association with transcript: | -39bp_to_ENST00000473074_5end |
EntrezGene: | RHOC |
HGNC: | 669 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.08e-24 | 121 |
embryonic cell | 2.54e-20 | 250 |
muscle precursor cell | 6.23e-13 | 58 |
myoblast | 6.23e-13 | 58 |
multi-potent skeletal muscle stem cell | 6.23e-13 | 58 |
smooth muscle cell | 1.82e-12 | 43 |
smooth muscle myoblast | 1.82e-12 | 43 |
muscle cell | 2.89e-12 | 55 |
vascular associated smooth muscle cell | 2.40e-11 | 32 |
lining cell | 4.35e-10 | 58 |
barrier cell | 4.35e-10 | 58 |
meso-epithelial cell | 7.13e-10 | 45 |
electrically responsive cell | 7.32e-10 | 61 |
electrically active cell | 7.32e-10 | 61 |
endothelial cell | 6.77e-09 | 36 |
fibroblast | 2.85e-07 | 76 |