FFCP PHASE1:Hg19::chr2:182756425..182756462,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:182756425..182756462,+ to FFCP PHASE1:Hg19::chr2:182756425..182756462,+: NSchange) |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6744 | |EntrezGene=6744 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11319 | |HGNC=11319 | ||
|TSSclassifier=strong | |||
|UniProt=P28290 | |UniProt=P28290 | ||
|association_with_transcript=-9bp_to_NM_001130445,NM_006751,uc002uoh.2,uc002uoi.2,uc002uoj.2,uc002uok.2,uc010zfn.1,uc010zfo.1_5end | |||
|cluster_id=chr2:182756425..182756462,+ | |||
|description=CAGE_peak_5_at_SSFA2_5end | |||
|id=chr2:182756425..182756462,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.07e-09!42;CL:0000766!3.07e-09!76;CL:0000860!4.37e-09!45;CL:0000738!1.73e-07!140;CL:0000557!1.81e-07!71;CL:0000839!1.86e-07!70;CL:0000763!2.86e-07!112;CL:0000049!2.86e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.74e-09;33!CL:0002057;7.74e-09;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.40e-10,42;CL:0002057,9.40e-10,42;CL:0000766,2.40e-09,72;CL:0000473,8.93e-08,48;CL:0000234,8.93e-08,48;CL:0000557,1.58e-07,67;CL:0000839,1.61e-07,66;CL:0000738,2.03e-07,136;CL:0000763,4.01e-07,108;CL:0000049,4.01e-07,108 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.41e-09;82!CL:0002057;1.54e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.01e-29!115;UBERON:0001049!1.15e-26!57;UBERON:0005068!1.15e-26!57;UBERON:0006241!1.15e-26!57;UBERON:0007135!1.15e-26!57;UBERON:0000073!1.55e-22!94;UBERON:0001016!1.55e-22!94;UBERON:0005743!4.53e-22!86;UBERON:0001017!5.33e-22!82;UBERON:0002616!4.80e-21!59;UBERON:0000955!9.48e-21!69;UBERON:0006238!9.48e-21!69;UBERON:0003080!2.29e-20!42;UBERON:0002780!4.53e-20!41;UBERON:0001890!4.53e-20!41;UBERON:0006240!4.53e-20!41;UBERON:0002346!5.78e-20!90;UBERON:0003075!7.29e-19!86;UBERON:0007284!7.29e-19!86;UBERON:0002020!3.86e-17!34;UBERON:0003528!3.86e-17!34;UBERON:0001893!7.32e-17!34;UBERON:0002791!2.04e-16!33;UBERON:0001869!8.80e-16!32;UBERON:0000924!2.73e-14!173;UBERON:0006601!2.73e-14!173;UBERON:0004121!2.28e-13!169;UBERON:0003056!3.26e-13!61;UBERON:0000153!4.91e-13!129;UBERON:0007811!4.91e-13!129;UBERON:0000033!1.23e-12!123;UBERON:0000956!6.27e-12!25;UBERON:0000203!6.27e-12!25;UBERON:0002619!4.66e-11!22;UBERON:0001950!8.47e-10!20;UBERON:0003076!1.79e-07!15;UBERON:0003057!1.79e-07!15;UBERON:0000062!2.32e-07!511;UBERON:0002420!6.69e-07!9;UBERON:0007245!6.69e-07!9;UBERON:0010009!6.69e-07!9;UBERON:0010011!6.69e-07!9;UBERON:0000454!6.69e-07!9;UBERON:0002308!8.30e-07!9;UBERON:0000125!8.30e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;2.38e-15;34!UBERON:0002020;2.38e-15;34!UBERON:0002780;3.05e-15;41!UBERON:0001890;3.05e-15;41!UBERON:0001893;3.78e-15;34!UBERON:0002791;4.09e-15;32!UBERON:0001869;5.66e-15;32!UBERON:0000073;9.25e-15;53!UBERON:0002616;9.25e-15;53!UBERON:0000956;1.69e-12;25!UBERON:0000203;1.69e-12;25!UBERON:0002619;1.36e-11;22!UBERON:0001950;2.81e-10;20!UBERON:0000955;3.23e-10;68!UBERON:0001017;8.53e-10;75!UBERON:0001016;1.04e-09;83!UBERON:0007023;7.19e-09;114!UBERON:0002420;4.42e-07;9!UBERON:0007245;4.42e-07;9!UBERON:0010009;4.42e-07;9!UBERON:0010011;4.42e-07;9!UBERON:0000454;4.42e-07;9!UBERON:0000125;5.49e-07;9!UBERON:0002308;5.49e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.78e-28,114;UBERON:0001049,1.56e-26,56;UBERON:0005068,1.56e-26,56;UBERON:0006241,1.56e-26,56;UBERON:0007135,1.56e-26,56;UBERON:0000073,5.77e-25,53;UBERON:0002616,5.77e-25,53;UBERON:0001016,4.20e-22,89;UBERON:0001017,1.13e-21,81;UBERON:0002346,1.00e-20,86;UBERON:0000955,1.67e-20,68;UBERON:0006238,1.67e-20,68;UBERON:0002780,3.34e-20,41;UBERON:0001890,3.34e-20,41;UBERON:0003080,3.34e-20,41;UBERON:0006240,3.34e-20,41;UBERON:0003075,1.31e-19,82;UBERON:0007284,1.31e-19,82;UBERON:0003528,2.99e-17,34;UBERON:0002020,2.99e-17,34;UBERON:0001893,5.69e-17,34;UBERON:0002791,5.06e-16,32;UBERON:0001869,6.97e-16,32;UBERON:0003056,3.24e-14,61;UBERON:0004121,4.26e-14,171;UBERON:0000924,4.26e-14,171;UBERON:0006601,4.26e-14,171;UBERON:0010371,1.73e-13,104;UBERON:0011216,2.26e-12,223;UBERON:0000956,5.30e-12,25;UBERON:0000203,5.30e-12,25;UBERON:0010314,3.34e-11,132;UBERON:0002619,3.98e-11,22;UBERON:0001950,7.40e-10,20;UBERON:0003076,1.63e-07,15;UBERON:0003057,1.63e-07,15;UBERON:0002420,6.13e-07,9;UBERON:0007245,6.13e-07,9;UBERON:0010009,6.13e-07,9;UBERON:0010011,6.13e-07,9;UBERON:0000454,6.13e-07,9;UBERON:0000125,7.61e-07,9;UBERON:0002308,7.61e-07,9 | |||
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| ||
|short_description=p5@SSFA2 | |||
}} | }} |
Latest revision as of 21:33, 18 September 2015
Short description: | p5@SSFA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SSFA2_5end |
Coexpression cluster: | NA |
Association with transcript: | -9bp_to_NM_001130445, NM_006751, uc002uoh.2, uc002uoi.2, uc002uoj.2, uc002uok.2, uc010zfn.1, uc010zfo.1_5end |
EntrezGene: | SSFA2 |
HGNC: | 11319 |
UniProt: | P28290 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.40e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.40e-10 | 42 |
myeloid leukocyte | 2.40e-09 | 72 |
defensive cell | 8.93e-08 | 48 |
phagocyte | 8.93e-08 | 48 |
granulocyte monocyte progenitor cell | 1.58e-07 | 67 |
myeloid lineage restricted progenitor cell | 1.61e-07 | 66 |
leukocyte | 2.03e-07 | 136 |
myeloid cell | 4.01e-07 | 108 |
common myeloid progenitor | 4.01e-07 | 108 |