FFCP PHASE1:Hg19::chr2:71680668..71680759,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:71680668..71680759,+ to FFCP PHASE1:Hg19::chr2:71680668..71680759,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8291 | |EntrezGene=8291 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3097 | |HGNC=3097 | ||
|TSSclassifier=strong | |||
|UniProt=O75923 | |UniProt=O75923 | ||
|association_with_transcript=0bp_to_NM_001130976,NM_001130977,NM_001130978,NM_001130979,NM_001130980,NM_001130981,NM_003494,uc002sie.2,uc002sig.3,uc010fee.2,uc010fef.2,uc010feg.2,uc010feh.2,uc010fei.2,uc010yqx.1_5end | |||
|cluster_id=chr2:71680668..71680759,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_2_at_DYSF_5end | |||
|id=chr2:71680668..71680759,+ | |||
|ontology_enrichment_celltype=CL:0000115!1.26e-17!35;CL:0002057!5.45e-17!42;CL:0002139!3.63e-16!24;CL:0000766!4.09e-16!76;CL:0000860!8.48e-16!45;CL:0002194!8.22e-15!63;CL:0000576!8.22e-15!63;CL:0000040!8.22e-15!63;CL:0000559!8.22e-15!63;CL:0000213!5.71e-14!57;CL:0000215!5.71e-14!57;CL:0002078!1.16e-13!44;CL:0002009!1.78e-13!65;CL:0000071!1.55e-12!18;CL:0002546!1.55e-12!18;CL:0000839!3.71e-11!70;CL:0000557!2.34e-10!71;CL:0000222!6.00e-10!119;CL:1000413!3.85e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.18e-18;33!CL:0002057;2.18e-18;33!CL:0002139;8.03e-18;24!CL:0000115;3.04e-17;36!CL:0000473;2.02e-15;39!CL:0000234;2.02e-15;39!CL:0000071;8.94e-14;18!CL:0000576;3.50e-12;48!CL:0002078;1.76e-09;45!CL:0000213;6.27e-09;58!CL:0000215;6.27e-09;58!CL:0000766;3.70e-08;69!CL:1000413;8.91e-08;9!CL:0000094;2.59e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,5.33e-20,36;CL:0000860,2.48e-18,42;CL:0002057,2.48e-18,42;CL:0000766,3.38e-18,72;CL:0000473,3.42e-18,48;CL:0000234,3.42e-18,48;CL:0002139,8.39e-18,24;CL:0002194,1.90e-16,59;CL:0000576,1.90e-16,59;CL:0000040,1.90e-16,59;CL:0000559,1.90e-16,59;CL:0002009,3.47e-15,61;CL:0000213,4.64e-15,58;CL:0000215,4.64e-15,58;CL:0002078,4.46e-14,45;CL:0000071,9.19e-14,18;CL:0002546,9.19e-14,18;CL:0000839,1.94e-12,66;CL:0000557,5.96e-12,67;CL:0000222,1.66e-08,121;CL:0000763,5.40e-08,108;CL:0000049,5.40e-08,108;CL:1000413,9.07e-08,9;CL:0000094,2.67e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002546;8.94e-14;18!CL:0002057;9.03e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.52e-21!216;UBERON:0001009!2.15e-18!113;UBERON:0004535!4.17e-17!110;UBERON:0007023!8.63e-16!115;UBERON:0002049!1.36e-12!79;UBERON:0007798!1.36e-12!79;UBERON:0000467!1.49e-12!625;UBERON:0001986!1.55e-12!18;UBERON:0004638!1.55e-12!18;UBERON:0004852!1.55e-12!18;UBERON:0000480!2.58e-12!626;UBERON:0004111!7.74e-12!241;UBERON:0002193!1.43e-11!112;UBERON:0000025!1.67e-11!194;UBERON:0000055!4.58e-11!69;UBERON:0000487!6.14e-11!22;UBERON:0000468!9.44e-11!659;UBERON:0000922!1.26e-10!612;UBERON:0004872!1.28e-10!84;UBERON:0001981!6.04e-10!60;UBERON:0007500!6.04e-10!60;UBERON:0004537!6.04e-10!60;UBERON:0006965!6.04e-10!60;UBERON:0002050!7.79e-10!605;UBERON:0005423!7.79e-10!605;UBERON:0000923!1.02e-09!604;UBERON:0005291!1.02e-09!604;UBERON:0006598!1.02e-09!604;UBERON:0002532!1.02e-09!604;UBERON:0002390!1.09e-09!102;UBERON:0003061!1.09e-09!102;UBERON:0000477!1.64e-09!286;UBERON:0003914!3.25e-09!118;UBERON:0006914!5.45e-09!25;UBERON:0000119!1.22e-08!312;UBERON:0000483!4.96e-08!309;UBERON:0002371!2.81e-07!80;UBERON:0003915!3.85e-07!9;UBERON:0004700!3.85e-07!9;UBERON:0001917!3.85e-07!9;UBERON:0002405!5.53e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;8.94e-14;18!UBERON:0001986;8.94e-14;18!UBERON:0004852;8.94e-14;18!UBERON:0000487;2.56e-12;22!UBERON:0006914;1.43e-09;25!UBERON:0003915;8.91e-08;9!UBERON:0004700;8.91e-08;9!UBERON:0001917;8.91e-08;9!UBERON:0001009;5.99e-07;112!UBERON:0000490;9.57e-07;33 | |||
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|phase1_expression=0,0.642301571672949,0.281908808191942,0,0.446961094427288,0,0,0,0,1.22866968250754,0.697801167972428,16.3831029097629,6.06664049925443,0,0,4.03395087871065,3.61616716814386,4.38186054232424,2.92759679274304,2.58554221961255,4.48801520737357,6.58254915103984,0,0.273748850145768,1.50651167513763,0,0,0,24.388585164632,20.3429580991523,24.3061313606239,0.919421224478927,2.71085326900425,2.9580320813343,0,0,0,33.2397245119126,26.6724115135288,42.7511415310228,26.1981104860711,27.5309616116133,25.7575567634187,30.0974354273699,12.8477820854195,11.4014508758274,32.7724942037015,9.04569353648017,15.1756121738601,37.9753957865239,15.8819638048042,13.2430048737608,43.0932100920773,18.719055823931,17.6054432572644,40.0956183225748,11.7349644524874,8.31476892446813,30.3023053447194,17.6510964891852,16.6227652707751,36.6134943207255,18.949047474055,22.1636870277001,41.7901303625161,11.3477044938228,16.8162007228805,39.6972891105654,14.0800387973454,16.9407298869991,30.8753746343018,12.5214396235772,12.6584954976354,1.47878700418359,1.06302149982522,1.88692780957538,27.4081859997448,18.4717578195053,55.2896018237956,0.285012743741249,0,0.182664153764634,0,0.546138611262131,0,0.426730222566507,0.800791974072025,0,0,0,0,1.17447437874188,0,0,3.92355994087075,1.84368859342554,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0.95569624297229,1.95325036156926,0,0.903450714466637,1.02389288923535,0,2.36777252044017,0.821127996921047,2.21767417547206,0.267440195783507,0.144824403882799,2.43806866313962,4.02420515822182,1.02290049474824,0,1.00267582127178,0.144846518960824,0,0,1.22895262313288,5.32150553910154,3.16205228495254,2.88153966094968,4.00724817121796,0.370784442784429,7.14004266040303,6.96518949197069,4.38761269712255,0.476981248610684,0,0.371457501329565,48.1005025827426,28.3877416385021,61.0967282829366,33.9184765154406,39.0134475675212,21.1840892293852,28.632310415543,42.6387652629393,30.9516648537438,27.1123696339383,59.2159096150446,33.4519726516146,89.5707751201782,43.3842434808125,21.8738325928075,32.6837005519732,27.6171128330189,21.5087927723145,13.7984973719295,30.3765011061801,34.9915330907078,50.076558625704,112.456276603014,2.61656431285521,0.496971951695318,2.15271869829786,5.56118559415519,0.286836620748814,1.41867352879343,0,23.4847790605351,8.38669664618344,2.48968828319813,5.11900553864815,5.06731899651722,9.23280308634082,8.06646294271999,0,0,9.12754914471119,0,0,0,0,0.61246251376468,0.491337269247072,0.103325781175765,0,0.247266929278557,0,0,0,0,1.10825646193673,0.877955241761676,0.30648779579902,0,2.1552114800404,0.358779271377724,0.213557388818567,0,0,0,0.257640540045629,0.18611685633159,0.506328996723799,0.194874010322397,0.252433774244115,0,0,0.710019185033229,0,0.508681776931463,18.3597810505132,10.0916064618609,5.44928731239107,1.82960559194393,1.98794652482228,1.74290914304278,1.55491582523056,3.78481276313443,1.82488679537915,0,2.57296375277154,0,0,0,0,0,0,0,0,0.237270619111097,0.134831308160164,0,0.38474715694639,40.5985500043557,16.8290128564135,1.2347220339942,1.47008711385542,3.80265104465493,6.87979051674338,4.72631925345123,0,0.368965315629341,11.6666111002997,2.74375713521564,5.62008766288098,0.301586917234893,4.62942225792648,0,0,1.44331342025273,0.231860809950154,5.04857385214033,32.9155500895248,21.7603190911007,31.0114268142395,0,0,2.95460407304877,1.17002132569619,1.93220510975347,11.2480600784132,17.1341770762837,13.0433089462996,4.74660170325096,1.74380363108377,2.68367875415648,0,0,0,0,0.25248486685276,0,0.763976851116555,0,5.13217338068116,0,0.600686115687835,0,16.483269398768,15.6945624779981,4.5469737208989,0.517086863031111,0,1.690605505112,1.59562869950922,5.2003718455683,0.257207374262142,0,0,0,0,0,2.28015329005615,0,0,10.8518175741451,13.9445353376047,6.09835246210548,21.8922805154143,12.054170194371,0,0,0,0,3.61953266668948,1.02738161275192,5.37182889719687,0,0.788123040807709,0,2.31017465303547,0.254094624222463,0,0,0.502548796003046,0,113.849067639972,110.689739905489,307.081895456102,0,0.500170521059677,0,6.23912584592421,0.713715955188647,0.946214490203608,1.28855556491985,1.20378439891088,4.5481500811197,1.03473071292505,0,1.10621501125022,0,8.41944977089785,8.92172901908225,26.0527712914838,13.1585662499356,7.89783927745488,0,0,0.604780586659361,0.248107807818777,3.52962538562544,1.12264037773229,2.05022638809122,0.511707249066704,0.965123526861645,0,0,0,0,0,0.116210378459959,0,17.6445693866891,0.368323955743585,0.114814448164607,0,0.131124414959424,1.35359883872224,1.07821471946181,7.0591479225917,2.92278449306521,2.63879072232189,45.4933536283586,31.9776165919849,18.3528528686818,18.5072703228347,12.7344825645611,20.0675909541941,0.254876273045038,0.831076008928724,6.94011739638753,0,0.261435451024901,0.769350375349168,0.984043937099117,0,11.8497163394881,0,0,14.3566384499043,9.1008434445113,3.21367859688319,4.35018232314549,0.770243085573222,0.921022048356777,2.20538515975249,0,0,2.98293195956353,7.21159488738573,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| ||
|short_description=p2@DYSF | |||
}} | }} |
Latest revision as of 07:57, 18 September 2015
Short description: | p2@DYSF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DYSF_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_NM_001130976, NM_001130977, NM_001130978, NM_001130979, NM_001130980, NM_001130981, NM_003494, uc002sie.2, uc002sig.3, uc010fee.2, uc010fef.2, uc010feg.2, uc010feh.2, uc010fei.2, uc010yqx.1_5end |
EntrezGene: | DYSF |
HGNC: | 3097 |
UniProt: | O75923 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 5.33e-20 | 36 |
classical monocyte | 2.48e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.48e-18 | 42 |
myeloid leukocyte | 3.38e-18 | 72 |
defensive cell | 3.42e-18 | 48 |
phagocyte | 3.42e-18 | 48 |
endothelial cell of vascular tree | 8.39e-18 | 24 |
monopoietic cell | 1.90e-16 | 59 |
monocyte | 1.90e-16 | 59 |
monoblast | 1.90e-16 | 59 |
promonocyte | 1.90e-16 | 59 |
macrophage dendritic cell progenitor | 3.47e-15 | 61 |
lining cell | 4.64e-15 | 58 |
barrier cell | 4.64e-15 | 58 |
meso-epithelial cell | 4.46e-14 | 45 |
blood vessel endothelial cell | 9.19e-14 | 18 |
embryonic blood vessel endothelial progenitor cell | 9.19e-14 | 18 |
myeloid lineage restricted progenitor cell | 1.94e-12 | 66 |
granulocyte monocyte progenitor cell | 5.96e-12 | 67 |
mesodermal cell | 1.66e-08 | 121 |
myeloid cell | 5.40e-08 | 108 |
common myeloid progenitor | 5.40e-08 | 108 |
endothelial cell of artery | 9.07e-08 | 9 |
granulocyte | 2.67e-07 | 8 |