FFCP PHASE1:Hg19::chr4:176733444..176733449,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:176733444..176733449,- to FFCP PHASE1:Hg19::chr4:176733444..176733449,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2823 | |EntrezGene=2823 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4460 | |HGNC=4460 | ||
|TSSclassifier=strong | |||
|UniProt=D6RBH3 | |UniProt=D6RBH3 | ||
|association_with_transcript=-29bp_to_ENST00000505375_5end | |||
|cluster_id=chr4:176733444..176733449,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_13_at_GPM6A_5end | |||
|id=chr4:176733444..176733449,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;3.36e-09;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;8.23e-15;3!UBERON:0006601;2.96e-14;82!UBERON:0010122;3.36e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.68e-105!82;UBERON:0001049!2.45e-103!57;UBERON:0005068!2.45e-103!57;UBERON:0006241!2.45e-103!57;UBERON:0007135!2.45e-103!57;UBERON:0005743!3.63e-103!86;UBERON:0000073!2.50e-95!94;UBERON:0001016!2.50e-95!94;UBERON:0000955!5.64e-90!69;UBERON:0006238!5.64e-90!69;UBERON:0002616!4.18e-87!59;UBERON:0003075!1.37e-85!86;UBERON:0007284!1.37e-85!86;UBERON:0002780!6.40e-82!41;UBERON:0001890!6.40e-82!41;UBERON:0006240!6.40e-82!41;UBERON:0002346!3.42e-81!90;UBERON:0003080!9.20e-80!42;UBERON:0001893!1.11e-74!34;UBERON:0002020!2.48e-74!34;UBERON:0003528!2.48e-74!34;UBERON:0002791!5.07e-72!33;UBERON:0001869!3.57e-70!32;UBERON:0003056!2.57e-64!61;UBERON:0000956!1.20e-57!25;UBERON:0000203!1.20e-57!25;UBERON:0000033!6.83e-56!123;UBERON:0002619!7.77e-56!22;UBERON:0004121!1.66e-54!169;UBERON:0000924!6.54e-53!173;UBERON:0006601!6.54e-53!173;UBERON:0000153!1.14e-52!129;UBERON:0007811!1.14e-52!129;UBERON:0007023!4.00e-52!115;UBERON:0001950!8.19e-51!20;UBERON:0000025!5.06e-25!194;UBERON:0003076!2.42e-23!15;UBERON:0003057!2.42e-23!15;UBERON:0002420!1.82e-18!9;UBERON:0007245!1.82e-18!9;UBERON:0010009!1.82e-18!9;UBERON:0010011!1.82e-18!9;UBERON:0000454!1.82e-18!9;UBERON:0002308!9.94e-18!9;UBERON:0000125!9.94e-18!9;UBERON:0004111!1.40e-17!241;UBERON:0000200!1.80e-17!6;UBERON:0004733!5.88e-17!12;UBERON:0002028!5.88e-17!12;UBERON:0007277!5.88e-17!12;UBERON:0001871!9.53e-17!7;UBERON:0000064!2.43e-16!219;UBERON:0000483!3.10e-16!309;UBERON:0000119!6.09e-16!312;UBERON:0004732!1.65e-15!13;UBERON:0000477!2.99e-15!286;UBERON:0002298!7.74e-15!8;UBERON:0001872!7.87e-15!5;UBERON:0002021!1.67e-14!5;UBERON:0000349!2.08e-14!5;UBERON:0009663!2.20e-13!7;UBERON:0000475!1.65e-12!365;UBERON:0000369!1.62e-11!4;UBERON:0002435!1.62e-11!4;UBERON:0000204!1.62e-11!4;UBERON:0010082!1.62e-11!4;UBERON:0002680!8.32e-11!9;UBERON:0001895!8.32e-11!9;UBERON:0010092!8.32e-11!9;UBERON:0002771!1.51e-09!3;UBERON:0001894!3.64e-09!7;UBERON:0006222!3.64e-09!7;UBERON:0005383!5.85e-09!3;UBERON:0005382!5.85e-09!3;UBERON:0000062!2.15e-08!511;UBERON:0002240!2.33e-08!3;UBERON:0000988!2.39e-08!3;UBERON:0001896!2.45e-08!3;UBERON:0005290!2.45e-08!3;UBERON:0010096!2.45e-08!3;UBERON:0006331!3.43e-08!3;UBERON:0000922!4.97e-08!612;UBERON:0000481!3.30e-07!347;UBERON:0000923!3.34e-07!604;UBERON:0005291!3.34e-07!604;UBERON:0006598!3.34e-07!604;UBERON:0002532!3.34e-07!604;UBERON:0002050!3.65e-07!605;UBERON:0005423!3.65e-07!605;UBERON:0001870!4.22e-07!2;UBERON:0000467!5.64e-07!625;UBERON:0000480!6.15e-07!626;UBERON:0001876!6.30e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.01e-80;22!UBERON:0001869;3.57e-80;32!UBERON:0000956;3.96e-77;25!UBERON:0000203;3.96e-77;25!UBERON:0002791;9.64e-75;32!UBERON:0003528;1.92e-74;34!UBERON:0002020;1.92e-74;34!UBERON:0001893;1.50e-73;34!UBERON:0001950;2.50e-72;20!UBERON:0002780;6.25e-56;41!UBERON:0001890;6.25e-56;41!UBERON:0000073;2.35e-50;53!UBERON:0002616;2.35e-50;53!UBERON:0000955;1.42e-37;68!UBERON:0001017;2.25e-37;75!UBERON:0001016;2.03e-31;83!UBERON:0000200;1.07e-26;6!UBERON:0001872;2.51e-22;5!UBERON:0002021;6.70e-22;5!UBERON:0000349;7.47e-22;5!UBERON:0000369;3.14e-17;4!UBERON:0002435;3.14e-17;4!UBERON:0000204;3.14e-17;4!UBERON:0002420;8.34e-17;9!UBERON:0007245;8.34e-17;9!UBERON:0010009;8.34e-17;9!UBERON:0010011;8.34e-17;9!UBERON:0000454;8.34e-17;9!UBERON:0001871;7.77e-16;6!UBERON:0001870;2.21e-14;3!UBERON:0007023;3.24e-13;114!UBERON:0005383;3.74e-13;3!UBERON:0005382;3.74e-13;3!UBERON:0004733;1.48e-12;12!UBERON:0002028;1.48e-12;12!UBERON:0002680;3.80e-12;9!UBERON:0001895;3.80e-12;9!UBERON:0011216;8.91e-12;132!UBERON:0004732;1.53e-11;13!UBERON:0000125;1.67e-11;9!UBERON:0002308;1.67e-11;9!UBERON:0002771;4.74e-10;2!UBERON:0001876;5.07e-10;2!UBERON:0002702;5.07e-10;2!UBERON:0009663;6.75e-10;7!UBERON:0001954;1.73e-09;2!UBERON:0003022;1.73e-09;2!UBERON:0002421;1.73e-09;2!UBERON:0002600;1.73e-09;2!UBERON:0001873;3.36e-09;2!UBERON:0010314;4.64e-08;132!UBERON:0002037;1.33e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.13e-91,53;UBERON:0002616,3.13e-91,53;UBERON:0001049,3.85e-91,56;UBERON:0005068,3.85e-91,56;UBERON:0006241,3.85e-91,56;UBERON:0007135,3.85e-91,56;UBERON:0001869,1.35e-90,32;UBERON:0001017,1.70e-88,81;UBERON:0001893,4.79e-85,34;UBERON:0003528,1.12e-84,34;UBERON:0002020,1.12e-84,34;UBERON:0002791,1.01e-83,32;UBERON:0000955,2.71e-82,68;UBERON:0006238,2.71e-82,68;UBERON:0002780,1.07e-80,41;UBERON:0001890,1.07e-80,41;UBERON:0003080,1.07e-80,41;UBERON:0006240,1.07e-80,41;UBERON:0002619,3.41e-80,22;UBERON:0001016,5.22e-79,89;UBERON:0000956,5.26e-77,25;UBERON:0000203,5.26e-77,25;UBERON:0001950,2.66e-72,20;UBERON:0003075,4.17e-60,82;UBERON:0007284,4.17e-60,82;UBERON:0002346,5.62e-57,86;UBERON:0003056,1.92e-52,61;UBERON:0010371,7.68e-46,104;UBERON:0007023,2.16e-39,114;UBERON:0004121,1.01e-37,171;UBERON:0000924,1.01e-37,171;UBERON:0006601,1.01e-37,171;UBERON:0010314,8.31e-37,132;UBERON:0011216,3.73e-30,223;UBERON:0000200,1.50e-26,6;UBERON:0001872,2.15e-22,5;UBERON:0002021,7.01e-22,5;UBERON:0000349,9.92e-22,5;UBERON:0000025,2.77e-21,192;UBERON:0000369,3.50e-17,4;UBERON:0002435,3.50e-17,4;UBERON:0000204,3.50e-17,4;UBERON:0010082,3.50e-17,4;UBERON:0002420,9.34e-17,9;UBERON:0007245,9.34e-17,9;UBERON:0010009,9.34e-17,9;UBERON:0010011,9.34e-17,9;UBERON:0000454,9.34e-17,9;UBERON:0001871,8.93e-16,6;UBERON:0004111,1.90e-15,240;UBERON:0001870,2.32e-14,3;UBERON:0005383,3.59e-13,3;UBERON:0005382,3.59e-13,3;UBERON:0003076,3.98e-13,15;UBERON:0003057,3.98e-13,15;UBERON:0004733,1.88e-12,12;UBERON:0002028,1.88e-12,12;UBERON:0007277,1.88e-12,12;UBERON:0002680,4.70e-12,9;UBERON:0001895,4.70e-12,9;UBERON:0010092,4.70e-12,9;UBERON:0004732,1.91e-11,13;UBERON:0000125,1.92e-11,9;UBERON:0002308,1.92e-11,9;UBERON:0000483,2.04e-10,306;UBERON:0000119,3.07e-10,309;UBERON:0002771,5.42e-10,2;UBERON:0001876,5.42e-10,2;UBERON:0002702,5.42e-10,2;UBERON:0009663,7.16e-10,7;UBERON:0001954,1.85e-09,2;UBERON:0003022,1.85e-09,2;UBERON:0002421,1.85e-09,2;UBERON:0002600,1.85e-09,2;UBERON:0001873,3.36e-09,2;UBERON:0010122,3.36e-09,2;UBERON:0002037,1.33e-07,6;UBERON:0006215,1.33e-07,6 | |||
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| ||
|short_description=p13@GPM6A | |||
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Latest revision as of 21:47, 16 September 2015
Short description: | p13@GPM6A |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_GPM6A_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -29bp_to_ENST00000505375_5end |
EntrezGene: | GPM6A |
HGNC: | 4460 |
UniProt: | D6RBH3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data