FFCP PHASE1:Hg19::chr5:140787568..140787594,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:140787568..140787594,+ to FFCP PHASE1:Hg19::chr5:140787568..140787594,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=56100 | |EntrezGene=56100 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8713 | |HGNC=8713 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y5F9 | |UniProt=Q9Y5F9 | ||
|association_with_transcript=-175bp_to_ENST00000520790,NM_018926,NM_032100,uc003lki.1,uc003lkj.1_5end | |||
|cluster_id=chr5:140787568..140787594,+ | |||
|description=CAGE_peak_1_at_PCDHGB6_5end | |||
|id=chr5:140787568..140787594,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.66e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.10e-36!115;UBERON:0005743!2.23e-33!86;UBERON:0001017!2.92e-32!82;UBERON:0001049!1.06e-30!57;UBERON:0005068!1.06e-30!57;UBERON:0006241!1.06e-30!57;UBERON:0007135!1.06e-30!57;UBERON:0000073!1.38e-30!94;UBERON:0001016!1.38e-30!94;UBERON:0002616!2.47e-29!59;UBERON:0003075!3.23e-27!86;UBERON:0007284!3.23e-27!86;UBERON:0002346!1.10e-26!90;UBERON:0000955!7.18e-26!69;UBERON:0006238!7.18e-26!69;UBERON:0000153!1.60e-25!129;UBERON:0007811!1.60e-25!129;UBERON:0004121!5.10e-25!169;UBERON:0000033!5.71e-25!123;UBERON:0000924!5.89e-25!173;UBERON:0006601!5.89e-25!173;UBERON:0003080!2.70e-24!42;UBERON:0002780!7.67e-24!41;UBERON:0001890!7.67e-24!41;UBERON:0006240!7.67e-24!41;UBERON:0003056!2.19e-22!61;UBERON:0001893!6.04e-20!34;UBERON:0002020!9.96e-20!34;UBERON:0003528!9.96e-20!34;UBERON:0002791!2.24e-19!33;UBERON:0001869!1.03e-18!32;UBERON:0000475!1.16e-18!365;UBERON:0000477!5.82e-18!286;UBERON:0004111!1.29e-15!241;UBERON:0000119!1.30e-14!312;UBERON:0000956!1.78e-14!25;UBERON:0000203!1.78e-14!25;UBERON:0000483!3.40e-14!309;UBERON:0000481!6.05e-14!347;UBERON:0000025!6.11e-14!194;UBERON:0002619!1.82e-13!22;UBERON:0000468!3.60e-13!659;UBERON:0001950!7.32e-13!20;UBERON:0000467!3.50e-10!625;UBERON:0000480!5.27e-10!626;UBERON:0000922!3.18e-08!612;UBERON:0003076!1.35e-07!15;UBERON:0003057!1.35e-07!15;UBERON:0000064!2.21e-07!219;UBERON:0002050!5.14e-07!605;UBERON:0005423!5.14e-07!605;UBERON:0000062!6.85e-07!511;UBERON:0002308!9.79e-07!9;UBERON:0000125!9.79e-07!9;UBERON:0000923!9.90e-07!604;UBERON:0005291!9.90e-07!604;UBERON:0006598!9.90e-07!604;UBERON:0002532!9.90e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;5.52e-23;41!UBERON:0001890;5.52e-23;41!UBERON:0001893;3.36e-22;34!UBERON:0002791;3.41e-22;32!UBERON:0001869;4.05e-22;32!UBERON:0003528;4.20e-22;34!UBERON:0002020;4.20e-22;34!UBERON:0000073;1.55e-21;53!UBERON:0002616;1.55e-21;53!UBERON:0000956;1.72e-18;25!UBERON:0000203;1.72e-18;25!UBERON:0001950;3.93e-17;20!UBERON:0002619;6.36e-17;22!UBERON:0001017;7.97e-16;75!UBERON:0000955;5.41e-15;68!UBERON:0001016;6.09e-13;83!UBERON:0007023;1.22e-11;114!UBERON:0000125;8.57e-09;9!UBERON:0002308;8.57e-09;9!UBERON:0002420;2.44e-08;9!UBERON:0007245;2.44e-08;9!UBERON:0010009;2.44e-08;9!UBERON:0010011;2.44e-08;9!UBERON:0000454;2.44e-08;9!UBERON:0009663;3.12e-07;7!UBERON:0004733;3.54e-07;12!UBERON:0002028;3.54e-07;12!UBERON:0001894;7.10e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.38e-45,114;UBERON:0001017,7.70e-40,81;UBERON:0001049,9.61e-40,56;UBERON:0005068,9.61e-40,56;UBERON:0006241,9.61e-40,56;UBERON:0007135,9.61e-40,56;UBERON:0000073,4.38e-37,53;UBERON:0002616,4.38e-37,53;UBERON:0001016,1.30e-35,89;UBERON:0003075,1.05e-34,82;UBERON:0007284,1.05e-34,82;UBERON:0002346,1.77e-33,86;UBERON:0000955,4.20e-32,68;UBERON:0006238,4.20e-32,68;UBERON:0002780,2.29e-31,41;UBERON:0001890,2.29e-31,41;UBERON:0003080,2.29e-31,41;UBERON:0006240,2.29e-31,41;UBERON:0004121,3.07e-28,171;UBERON:0000924,3.07e-28,171;UBERON:0006601,3.07e-28,171;UBERON:0010314,2.94e-27,132;UBERON:0003056,8.25e-27,61;UBERON:0001893,5.78e-26,34;UBERON:0003528,1.14e-25,34;UBERON:0002020,1.14e-25,34;UBERON:0010371,1.34e-25,104;UBERON:0001869,2.93e-24,32;UBERON:0002791,3.43e-24,32;UBERON:0011216,2.35e-21,223;UBERON:0000956,2.06e-18,25;UBERON:0000203,2.06e-18,25;UBERON:0001950,3.27e-17,20;UBERON:0002619,5.40e-17,22;UBERON:0004111,2.26e-15,240;UBERON:0000025,4.26e-13,192;UBERON:0000119,6.85e-10,309;UBERON:0000483,1.16e-09,306;UBERON:0003076,1.83e-09,15;UBERON:0003057,1.83e-09,15;UBERON:0000125,9.76e-09,9;UBERON:0002308,9.76e-09,9;UBERON:0002420,1.39e-08,9;UBERON:0007245,1.39e-08,9;UBERON:0010009,1.39e-08,9;UBERON:0010011,1.39e-08,9;UBERON:0000454,1.39e-08,9;UBERON:0009663,2.60e-07,7;UBERON:0004733,4.49e-07,12;UBERON:0002028,4.49e-07,12;UBERON:0007277,4.49e-07,12;UBERON:0001894,8.80e-07,7;UBERON:0006222,8.80e-07,7 | |||
|phase1_expression=2.36181893051724,1.71280419112787,0.704772020479856,0,0,0.872338524100369,2.53299878168311,0,3.91778442299758,0,0,0,0,3.09415882400117,0.662794751455832,0,0,1.46062018077475,0,0.61560529038394,0,3.44800193625897,2.57612388417951,2.18999080116615,2.38531015230125,0,0,0,1.18009283054671,0.383829398097213,0.309632246632152,0,0,0,0,0,0.880801318004542,0,0.200544447470142,0,0.447830948479849,0,0.77272670290256,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0.217188844705117,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0.889509253863555,0,0.400395987036012,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0.383220493601921,0,0,0,0,0,0.150575119077773,0,0,0.236777252044017,0,0,0.267440195783507,0.144824403882799,2.43806866313962,0,0.767175371061182,0.722878304769133,1.00267582127178,2.17269778441236,1.5905718941022,1.94653948121054,1.60709189178915,2.21729397462564,1.58102614247627,3.1434978119451,0,0.370784442784429,0,0.174129737299267,0.132957960518865,0,1.14398982156026,0,1.39133685156694,0.860234595106124,0.347140501607594,1.13061588384802,0.838998872419812,1.10047216776027,0.417989933073621,1.03366703667732,2.84613010149368,4.01664735317604,0,0.760272105718513,0.732186172644509,0,0.81014194788176,0.803697554556718,0.44905874525234,0.337834441449967,0,3.79706263827252,0.916008719652036,0,0,0.872188104285069,0,0.25326102332916,0,0.573673241497627,0.354668382198357,1.12135520028461,1.06748995729705,0.24666754841716,3.7345324247972,0.269421344139376,0.817309515567294,3.02714855289863,4.03323147135999,1.40592859100278,0.312160076830321,0.570471821544449,0.448346041655403,0.352303495931295,0.323745888736263,0.140450806702248,2.04154171254893,0.737005903870608,2.37649296704261,3.56400857184616,3.21447008062124,0,2.15585442544872,1.34668891163253,1.12606667884768,0.554128230968366,0.438977620880838,2.45190236639216,2.25357088359895,0.567160915800105,0.358779271377724,1.06778694409284,0.635795703478686,0.600182192168805,0.515262646192195,0.772921620136887,1.48893485065272,0,0,0.252433774244115,1.74894807420369,1.2931684545505,0.355009592516614,0.302256294682921,0.169560592310488,0.773043412653187,0,0.286804595389004,0.365921118388786,0.132529768321485,1.62671520017326,5.28671380578389,0.756962552626885,2.18986415445498,3.12899064659632,1.28648187638577,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,2.057870056657,1.47008711385542,2.53510069643662,5.89696330006576,2.95394953340702,0,0,1.02940686179115,0.329250856225877,0,0,0.555530670951178,0.651616610620649,0,0,2.43453850447661,2.7003999674239,1.87676382089396,0.462985512576611,1.52203321787679,0,0,0.246217006087397,0,0,0.93733833986777,0.335964256397719,0,0,0,0.383382679165211,0,0.088048434013226,0.414656231081544,0.288239906833923,0,0.952468414382536,2.29193055334967,1.17217447210047,0,0.514137463516618,0.300343057843917,0.571652865261156,1.00917975910825,0.43596006883328,1.39342743059805,0.129271715757778,0,0,1.06375246633948,0,0.514414748524284,0,0,1.85871391755592,2.71310802695722,0.823240336780769,0.325736184293735,2.84313558994037,0,0,0.871533458600294,0.199945982364114,0,0.502257091432126,0,1.4377491329495,0,1.42636905040718,0.579125226670317,0.410952645100767,0.358121926479791,0,0.197030760201927,0.862510299438069,0.256686072559497,8.63921722356376,14.3153839243384,2.31986643833309,11.056073512067,3.18969375826582,0,0,0,7.60687248658667,0,0,1.24782516918484,0.356857977594324,1.26161932027148,1.28855556491985,2.40756879782175,2.27407504055985,2.0694614258501,0,0.368738337083406,1.73767228936166,2.93701736194111,0.343143423810856,0,0.431428401637234,0,0,0,0,0.496215615637554,2.76231551918512,1.12264037773229,1.02511319404561,0,0.160853921143607,0,0.154209693802656,1.06537035187876,0.410635780069046,0.519254429183621,0.232420756919918,0,0,0.552485933615378,0.918515585316854,0,1.57349297951309,0.902399225814824,0.770153371044148,0.784349769176855,0,1.37217117560738,1.13733384070897,0,0.647747748306418,1.54227252690289,2.98041081298238,3.51182841698397,0,0,0,0,0,0.512900250232778,2.29610251989794,0.976135183992909,2.67906630284078,0,0,0.574265537996172,0,0,2.70678011217942,0.154048617114644,0.15350367472613,0.137836572484531,0.537101224341368,1.0151168573996,0.681813019328807,1.86967274858148,0.330569830721956,0,0.638063562472921,0.10115778085555,0,0,0.6970372701606,0.616067160352178,0.532306030317022,0,0.37064843820784,0,0.372158369359667,1.2655176988749,0.190630193923825,0.767693373934002,2.99557291623744,2.54562598340749,0,0.359744915166629,0.54907405947211,1.29593642580255,0.808729926293264,0,0,0.48763373908959,0,0,0.136499911407986,0.707027159768564,0,0.551365343546124,0,0,0.578775534266688,1.9676842561399,1.01455188481352,0,0,0.717056761020258,0.88424136911809,0,0.354761064070598,1.26664581178598,1.64647446479951,2.65631221636001,1.39973888097993,0.0962221127255121,0,0,2.63602642174982,0,0,0,0,0,0,0,0,0,0,0,0,0,7.69983884210687,0,0,0,0,0.159426272728822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| ||
|short_description=p1@PCDHGB6 | |||
}} | }} |
Latest revision as of 04:16, 25 September 2015
Short description: | p1@PCDHGB6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PCDHGB6_5end |
Coexpression cluster: | NA |
Association with transcript: | -175bp_to_ENST00000520790, NM_018926, NM_032100, uc003lki.1, uc003lkj.1_5end |
EntrezGene: | PCDHGB6 |
HGNC: | 8713 |
UniProt: | Q9Y5F9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data