FFCP PHASE1:Hg19::chrX:107825942..107825949,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:107825942..107825949,+ to FFCP PHASE1:Hg19::chrX:107825942..107825949,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1287 | |EntrezGene=1287 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2207 | |HGNC=2207 | ||
|TSSclassifier=strong | |||
|UniProt=Q49AM6 | |UniProt=Q49AM6 | ||
|association_with_transcript=220bp_to_ENST00000483338,uc004eob.1_5end | |||
|cluster_id=chrX:107825942..107825949,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_4_at_COL4A5_5end | |||
|id=chrX:107825942..107825949,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.24e-22;82!UBERON:0006241;2.24e-13;3!UBERON:0003057;2.24e-13;3!UBERON:0006215;1.14e-12;3!UBERON:0010122;3.15e-09;2!UBERON:0002532;4.37e-07;206!UBERON:0010316;4.37e-07;206 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.71e-54!57;UBERON:0005068!1.71e-54!57;UBERON:0006241!1.71e-54!57;UBERON:0007135!1.71e-54!57;UBERON:0001017!7.41e-45!82;UBERON:0002616!4.40e-44!59;UBERON:0003075!1.40e-42!86;UBERON:0007284!1.40e-42!86;UBERON:0005743!4.15e-42!86;UBERON:0000955!1.24e-41!69;UBERON:0006238!1.24e-41!69;UBERON:0007023!3.31e-41!115;UBERON:0002346!5.00e-40!90;UBERON:0000073!1.26e-38!94;UBERON:0001016!1.26e-38!94;UBERON:0002780!2.77e-38!41;UBERON:0001890!2.77e-38!41;UBERON:0006240!2.77e-38!41;UBERON:0001893!6.78e-38!34;UBERON:0002020!7.54e-38!34;UBERON:0003528!7.54e-38!34;UBERON:0003080!3.73e-37!42;UBERON:0002791!3.92e-36!33;UBERON:0001869!4.41e-34!32;UBERON:0000033!3.57e-26!123;UBERON:0003056!3.92e-26!61;UBERON:0002619!6.55e-26!22;UBERON:0000153!2.73e-24!129;UBERON:0007811!2.73e-24!129;UBERON:0004121!8.00e-24!169;UBERON:0000924!6.74e-23!173;UBERON:0006601!6.74e-23!173;UBERON:0001950!1.54e-22!20;UBERON:0000956!2.96e-22!25;UBERON:0000203!2.96e-22!25;UBERON:0002308!2.22e-18!9;UBERON:0000125!2.22e-18!9;UBERON:0002420!4.02e-18!9;UBERON:0007245!4.02e-18!9;UBERON:0010009!4.02e-18!9;UBERON:0010011!4.02e-18!9;UBERON:0000454!4.02e-18!9;UBERON:0003076!4.15e-18!15;UBERON:0003057!4.15e-18!15;UBERON:0000025!2.79e-17!194;UBERON:0004111!2.06e-16!241;UBERON:0004732!1.28e-14!13;UBERON:0009663!1.36e-14!7;UBERON:0000477!3.57e-13!286;UBERON:0002298!4.38e-13!8;UBERON:0004733!4.83e-13!12;UBERON:0002028!4.83e-13!12;UBERON:0007277!4.83e-13!12;UBERON:0000483!1.14e-12!309;UBERON:0000200!1.31e-12!6;UBERON:0000119!2.23e-12!312;UBERON:0000064!5.56e-11!219;UBERON:0000062!7.34e-11!511;UBERON:0000349!1.13e-10!5;UBERON:0000475!4.93e-10!365;UBERON:0001871!3.02e-09!7;UBERON:0000369!8.67e-09!4;UBERON:0002435!8.67e-09!4;UBERON:0000204!8.67e-09!4;UBERON:0010082!8.67e-09!4;UBERON:0000481!1.03e-08!347;UBERON:0000923!1.99e-08!604;UBERON:0005291!1.99e-08!604;UBERON:0006598!1.99e-08!604;UBERON:0002532!1.99e-08!604;UBERON:0002050!2.25e-08!605;UBERON:0005423!2.25e-08!605;UBERON:0000922!5.28e-08!612;UBERON:0002680!5.62e-08!9;UBERON:0001895!5.62e-08!9;UBERON:0010092!5.62e-08!9;UBERON:0000467!7.42e-08!625;UBERON:0000480!8.36e-08!626;UBERON:0006331!1.73e-07!3;UBERON:0000988!1.88e-07!3;UBERON:0001896!2.35e-07!3;UBERON:0005290!2.35e-07!3;UBERON:0010096!2.35e-07!3;UBERON:0001872!2.48e-07!5;UBERON:0002771!3.13e-07!3;UBERON:0002240!5.07e-07!3;UBERON:0005383!7.68e-07!3;UBERON:0005382!7.68e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.86e-66;34!UBERON:0003528;3.90e-65;34!UBERON:0002020;3.90e-65;34!UBERON:0002791;6.50e-62;32!UBERON:0001869;1.22e-61;32!UBERON:0000073;1.91e-61;53!UBERON:0002616;1.91e-61;53!UBERON:0002780;1.23e-55;41!UBERON:0001890;1.23e-55;41!UBERON:0002619;9.58e-51;22!UBERON:0001950;2.63e-49;20!UBERON:0000956;2.04e-44;25!UBERON:0000203;2.04e-44;25!UBERON:0000955;1.48e-38;68!UBERON:0001017;1.80e-38;75!UBERON:0000125;4.89e-38;9!UBERON:0002308;4.89e-38;9!UBERON:0002420;2.04e-37;9!UBERON:0007245;2.04e-37;9!UBERON:0010009;2.04e-37;9!UBERON:0010011;2.04e-37;9!UBERON:0000454;2.04e-37;9!UBERON:0001016;1.41e-31;83!UBERON:0004732;3.14e-31;13!UBERON:0009663;9.33e-30;7!UBERON:0004733;9.08e-28;12!UBERON:0002028;9.08e-28;12!UBERON:0002298;1.17e-26;6!UBERON:0000200;1.71e-25;6!UBERON:0007023;6.69e-19;114!UBERON:0000369;3.65e-17;4!UBERON:0002435;3.65e-17;4!UBERON:0000204;3.65e-17;4!UBERON:0002680;1.27e-16;9!UBERON:0001895;1.27e-16;9!UBERON:0001871;2.27e-15;6!UBERON:0001872;1.63e-14;5!UBERON:0000988;2.47e-14;3!UBERON:0000349;3.21e-14;5!UBERON:0001896;4.30e-14;3!UBERON:0005290;4.30e-14;3!UBERON:0001870;1.28e-13;3!UBERON:0002240;2.24e-13;3!UBERON:0005174;2.24e-13;3!UBERON:0001137;2.24e-13;3!UBERON:0011216;5.48e-13;132!UBERON:0005383;5.96e-13;3!UBERON:0005382;5.96e-13;3!UBERON:0010314;3.98e-10;132!UBERON:0002148;5.19e-10;2!UBERON:0006331;5.19e-10;2!UBERON:0009662;5.19e-10;2!UBERON:0001875;5.80e-10;2!UBERON:0006514;5.80e-10;2!UBERON:0001897;6.77e-10;2!UBERON:0010225;6.77e-10;2!UBERON:0002771;7.90e-10;2!UBERON:0005162;9.62e-10;2!UBERON:0000122;9.62e-10;2!UBERON:0001876;2.19e-09;2!UBERON:0002702;2.19e-09;2!UBERON:0001873;3.15e-09;2!UBERON:0002021;2.16e-08;5 | |||
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| ||
|short_description=p4@COL4A5 | |||
}} | }} |
Latest revision as of 23:43, 18 September 2015
Short description: | p4@COL4A5 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_COL4A5_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 220bp_to_ENST00000483338, uc004eob.1_5end |
EntrezGene: | COL4A5 |
HGNC: | 2207 |
UniProt: | Q49AM6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data