FFCP PHASE1:Hg19::chrX:23352816..23352836,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:23352816..23352836,+ to FFCP PHASE1:Hg19::chrX:23352816..23352836,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=139411 | |EntrezGene=139411 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26392 | |HGNC=26392 | ||
|TSSclassifier=strong | |||
|UniProt=Q96NR3 | |UniProt=Q96NR3 | ||
|association_with_transcript=-148bp_to_NM_173495,uc004dal.3,uc010nfu.1_5end | |||
|cluster_id=chrX:23352816..23352836,+ | |||
|coexpression_cluster_id=C2342 | |||
|description=CAGE_peak_4_at_PTCHD1_5end | |||
|id=chrX:23352816..23352836,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;2.35e-10;3!UBERON:0003057;2.35e-10;3!UBERON:0006601;9.50e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.43e-67!57;UBERON:0005068!1.43e-67!57;UBERON:0006241!1.43e-67!57;UBERON:0007135!1.43e-67!57;UBERON:0001017!5.39e-64!82;UBERON:0005743!2.49e-60!86;UBERON:0000073!4.02e-60!94;UBERON:0001016!4.02e-60!94;UBERON:0002616!3.02e-58!59;UBERON:0007023!8.11e-58!115;UBERON:0000955!8.67e-55!69;UBERON:0006238!8.67e-55!69;UBERON:0002780!3.33e-53!41;UBERON:0001890!3.33e-53!41;UBERON:0006240!3.33e-53!41;UBERON:0003080!1.05e-51!42;UBERON:0002020!5.08e-48!34;UBERON:0003528!5.08e-48!34;UBERON:0001893!5.34e-47!34;UBERON:0003075!1.69e-46!86;UBERON:0007284!1.69e-46!86;UBERON:0002791!1.91e-45!33;UBERON:0002346!8.46e-44!90;UBERON:0001869!2.71e-43!32;UBERON:0003056!1.70e-32!61;UBERON:0000956!3.61e-30!25;UBERON:0000203!3.61e-30!25;UBERON:0000153!2.14e-28!129;UBERON:0007811!2.14e-28!129;UBERON:0004121!9.14e-28!169;UBERON:0000924!9.32e-27!173;UBERON:0006601!9.32e-27!173;UBERON:0000033!2.09e-26!123;UBERON:0002619!1.27e-25!22;UBERON:0001950!6.30e-22!20;UBERON:0002308!5.29e-20!9;UBERON:0000125!5.29e-20!9;UBERON:0003076!2.76e-16!15;UBERON:0003057!2.76e-16!15;UBERON:0009663!1.17e-15!7;UBERON:0002420!1.39e-15!9;UBERON:0007245!1.39e-15!9;UBERON:0010009!1.39e-15!9;UBERON:0010011!1.39e-15!9;UBERON:0000454!1.39e-15!9;UBERON:0004733!9.15e-14!12;UBERON:0002028!9.15e-14!12;UBERON:0007277!9.15e-14!12;UBERON:0000025!9.61e-14!194;UBERON:0002298!1.26e-13!8;UBERON:0004732!1.52e-12!13;UBERON:0000200!1.94e-12!6;UBERON:0004111!3.25e-11!241;UBERON:0000922!8.94e-11!612;UBERON:0000064!2.34e-10!219;UBERON:0001871!1.16e-09!7;UBERON:0000477!1.88e-09!286;UBERON:0000369!2.74e-09!4;UBERON:0002435!2.74e-09!4;UBERON:0000204!2.74e-09!4;UBERON:0010082!2.74e-09!4;UBERON:0000468!2.30e-08!659;UBERON:0002680!2.57e-08!9;UBERON:0001895!2.57e-08!9;UBERON:0010092!2.57e-08!9;UBERON:0006331!4.53e-08!3;UBERON:0000923!7.88e-08!604;UBERON:0005291!7.88e-08!604;UBERON:0006598!7.88e-08!604;UBERON:0002532!7.88e-08!604;UBERON:0001896!7.92e-08!3;UBERON:0005290!7.92e-08!3;UBERON:0010096!7.92e-08!3;UBERON:0002050!8.82e-08!605;UBERON:0005423!8.82e-08!605;UBERON:0001894!1.16e-07!7;UBERON:0006222!1.16e-07!7;UBERON:0000988!1.40e-07!3;UBERON:0000349!1.43e-07!5;UBERON:0005383!1.53e-07!3;UBERON:0005382!1.53e-07!3;UBERON:0000475!1.65e-07!365;UBERON:0002771!2.02e-07!3;UBERON:0000467!2.52e-07!625;UBERON:0000480!2.81e-07!626;UBERON:0000483!3.13e-07!309;UBERON:0000119!4.87e-07!312;UBERON:0000062!5.95e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0000125;1.03e-37;9!UBERON:0002308;1.03e-37;9!UBERON:0002420;2.03e-27;9!UBERON:0007245;2.03e-27;9!UBERON:0010009;2.03e-27;9!UBERON:0010011;2.03e-27;9!UBERON:0000454;2.03e-27;9!UBERON:0003528;1.03e-25;34!UBERON:0002020;1.03e-25;34!UBERON:0009663;6.81e-25;7!UBERON:0002791;1.00e-20;32!UBERON:0000073;1.93e-20;53!UBERON:0002616;1.93e-20;53!UBERON:0002780;2.77e-20;41!UBERON:0001890;2.77e-20;41!UBERON:0002298;2.45e-19;6!UBERON:0001869;1.74e-17;32!UBERON:0001893;8.73e-17;34!UBERON:0001017;1.47e-16;75!UBERON:0001016;7.74e-16;83!UBERON:0002148;1.32e-15;2!UBERON:0006331;1.32e-15;2!UBERON:0009662;1.32e-15;2!UBERON:0001875;1.47e-15;2!UBERON:0006514;1.47e-15;2!UBERON:0001897;3.35e-15;2!UBERON:0010225;3.35e-15;2!UBERON:0000955;1.93e-14;68!UBERON:0000988;1.06e-10;3!UBERON:0001896;2.35e-10;3!UBERON:0002240;2.35e-10;3!UBERON:0005174;2.35e-10;3!UBERON:0005290;2.35e-10;3!UBERON:0001137;2.35e-10;3!UBERON:0002619;3.17e-10;22!UBERON:0005383;4.30e-10;3!UBERON:0005382;4.30e-10;3!UBERON:0004733;9.57e-10;12!UBERON:0002028;9.57e-10;12!UBERON:0001871;2.26e-09;6!UBERON:0004732;5.28e-09;13!UBERON:0000956;5.50e-09;25!UBERON:0000203;5.50e-09;25!UBERON:0001874;3.44e-08;1!UBERON:0006834;3.44e-08;1!UBERON:0002038;3.44e-08;1!UBERON:0009661;3.44e-08;1!UBERON:0002950;3.44e-08;1!UBERON:0001891;3.44e-08;1!UBERON:0002784;4.89e-08;4!UBERON:0001950;5.47e-08;20!UBERON:0011216;8.01e-08;132!UBERON:0000369;8.81e-08;4!UBERON:0002435;8.81e-08;4!UBERON:0000204;8.81e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.59e-40,56;UBERON:0005068,1.59e-40,56;UBERON:0006241,1.59e-40,56;UBERON:0007135,1.59e-40,56;UBERON:0001017,5.01e-40,81;UBERON:0001016,3.67e-39,89;UBERON:0000125,2.01e-37,9;UBERON:0002308,2.01e-37,9;UBERON:0000073,5.34e-34,53;UBERON:0002616,5.34e-34,53;UBERON:0003528,3.57e-31,34;UBERON:0002020,3.57e-31,34;UBERON:0000955,8.21e-29,68;UBERON:0006238,8.21e-29,68;UBERON:0002420,2.52e-27,9;UBERON:0007245,2.52e-27,9;UBERON:0010009,2.52e-27,9;UBERON:0010011,2.52e-27,9;UBERON:0000454,2.52e-27,9;UBERON:0003075,1.10e-26,82;UBERON:0007284,1.10e-26,82;UBERON:0007023,1.88e-25,114;UBERON:0002780,2.08e-25,41;UBERON:0001890,2.08e-25,41;UBERON:0003080,2.08e-25,41;UBERON:0006240,2.08e-25,41;UBERON:0002346,2.74e-25,86;UBERON:0009663,1.18e-24,7;UBERON:0002791,2.00e-23,32;UBERON:0001893,5.63e-22,34;UBERON:0010371,2.56e-20,104;UBERON:0002298,2.25e-19,6;UBERON:0001869,2.44e-19,32;UBERON:0004121,1.18e-18,171;UBERON:0000924,1.18e-18,171;UBERON:0006601,1.18e-18,171;UBERON:0003076,1.21e-16,15;UBERON:0003057,1.21e-16,15;UBERON:0003056,2.00e-16,61;UBERON:0002148,1.43e-15,2;UBERON:0006331,1.43e-15,2;UBERON:0009662,1.43e-15,2;UBERON:0001875,1.54e-15,2;UBERON:0006514,1.54e-15,2;UBERON:0010314,2.94e-15,132;UBERON:0001897,5.15e-15,2;UBERON:0010225,5.15e-15,2;UBERON:0011216,2.95e-13,223;UBERON:0000988,1.11e-10,3;UBERON:0001896,2.05e-10,3;UBERON:0005290,2.05e-10,3;UBERON:0010096,2.05e-10,3;UBERON:0002240,2.15e-10,3;UBERON:0005174,2.15e-10,3;UBERON:0001137,2.15e-10,3;UBERON:0002619,2.19e-10,22;UBERON:0005383,6.81e-10,3;UBERON:0005382,6.81e-10,3;UBERON:0004733,9.17e-10,12;UBERON:0002028,9.17e-10,12;UBERON:0007277,9.17e-10,12;UBERON:0001871,2.24e-09,6;UBERON:0000025,2.34e-09,192;UBERON:0000956,3.97e-09,25;UBERON:0000203,3.97e-09,25;UBERON:0004732,5.08e-09,13;UBERON:0006834,2.02e-08,1;UBERON:0002038,3.57e-08,1;UBERON:0009661,3.57e-08,1;UBERON:0002950,3.57e-08,1;UBERON:0001891,3.57e-08,1;UBERON:0009616,3.57e-08,1;UBERON:0010286,3.57e-08,1;UBERON:0001874,3.83e-08,1;UBERON:0001950,4.52e-08,20;UBERON:0002784,6.04e-08,4;UBERON:0000369,1.24e-07,4;UBERON:0002435,1.24e-07,4;UBERON:0000204,1.24e-07,4;UBERON:0010082,1.24e-07,4;UBERON:0004111,9.27e-07,240 | |||
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| ||
|short_description=p4@PTCHD1 | |||
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Latest revision as of 17:29, 24 September 2015
Short description: | p4@PTCHD1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PTCHD1_5end |
Coexpression cluster: | C2342_locus_thalamus_spinal_hippocampus_globus_caudate_medulla |
Association with transcript: | -148bp_to_NM_173495, uc004dal.3, uc010nfu.1_5end |
EntrezGene: | PTCHD1 |
HGNC: | 26392 |
UniProt: | Q96NR3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data