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FFCP PHASE1:Mm9::chr16:5885363..5885404,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr16:5885363..5885404,+
|DHSsupport=NA
|short_description=p10@Rbfox1
|DPIdataset=NA
|description=CAGE_peak_10_at_Rbfox1_5end
|association_with_transcript=477bp_to_NM_021477,uc007ycb.2,uc007ycc.2,uc012abb.1_5end
|EntrezGene=268859
|EntrezGene=268859
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q9JJ43
|UniProt=Q9JJ43
|association_with_transcript=477bp_to_NM_021477,uc007ycb.2,uc007ycc.2,uc012abb.1_5end
|cluster_id=chr16:5885363..5885404,+
|description=CAGE_peak_10_at_Rbfox1_5end
|id=chr16:5885363..5885404,+
|ontology_enrichment_celltype=CL:0000117!1.78e-13!23;CL:0000337!1.78e-13!23;CL:0000540!1.19e-12!33;CL:0000047!1.19e-12!33;CL:0000031!1.19e-12!33;CL:0000404!1.19e-12!33;CL:0000393!4.84e-09!39;CL:0000211!4.84e-09!39;CL:0000221!8.39e-08!44;CL:0000133!8.39e-08!44;CL:0002319!9.83e-08!43
|ontology_enrichment_celltype_v019_2=CL:0000117,8.91e-19,23;CL:0000337,8.91e-19,23;CL:0000540,1.27e-14,33;CL:0000047,1.27e-14,33;CL:0000031,1.27e-14,33;CL:0000404,1.27e-14,33;CL:0000393,1.40e-11,39;CL:0000211,1.40e-11,39;CL:0002319,4.93e-10,43;CL:0000221,1.08e-09,44;CL:0000133,1.08e-09,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!4.58e-24!73;UBERON:0005743!4.58e-24!73;UBERON:0000073!1.89e-23!75;UBERON:0001016!1.89e-23!75;UBERON:0002346!6.36e-23!71;UBERON:0003075!6.36e-23!71;UBERON:0007284!6.36e-23!71;UBERON:0001049!3.96e-22!52;UBERON:0005068!3.96e-22!52;UBERON:0006241!3.96e-22!52;UBERON:0007135!3.96e-22!52;UBERON:0000955!4.22e-21!50;UBERON:0006238!4.22e-21!50;UBERON:0004121!2.48e-20!102;UBERON:0000924!2.48e-20!102;UBERON:0006601!2.48e-20!102;UBERON:0002616!3.08e-20!49;UBERON:0002020!1.79e-19!34;UBERON:0000033!3.73e-18!63;UBERON:0003080!3.14e-16!40;UBERON:0002791!4.76e-16!29;UBERON:0003528!4.76e-16!29;UBERON:0001893!4.76e-16!29;UBERON:0002780!1.66e-15!39;UBERON:0001890!1.66e-15!39;UBERON:0006240!1.66e-15!39;UBERON:0003056!3.31e-15!49;UBERON:0000956!1.51e-10!21;UBERON:0001869!1.51e-10!21;UBERON:0000203!1.51e-10!21;UBERON:0002021!4.70e-09!10;UBERON:0000411!4.70e-09!10;UBERON:0001950!4.70e-09!10;UBERON:0007811!1.76e-08!86;UBERON:0002619!4.82e-08!17;UBERON:0002420!6.61e-07!8;UBERON:0007245!6.61e-07!8;UBERON:0010009!6.61e-07!8;UBERON:0010011!6.61e-07!8;UBERON:0000454!6.61e-07!8
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.53e-44,54;UBERON:0001049,1.74e-40,52;UBERON:0005068,1.74e-40,52;UBERON:0006241,1.74e-40,52;UBERON:0007135,1.74e-40,52;UBERON:0001017,3.31e-39,73;UBERON:0001016,7.41e-38,75;UBERON:0002020,7.43e-36,34;UBERON:0002346,1.38e-34,64;UBERON:0003075,1.38e-34,64;UBERON:0007284,1.38e-34,64;UBERON:0000955,8.80e-34,47;UBERON:0006238,8.80e-34,47;UBERON:0002616,4.06e-32,46;UBERON:0010371,5.17e-29,73;UBERON:0003528,6.02e-29,29;UBERON:0002791,6.02e-29,29;UBERON:0001893,6.02e-29,29;UBERON:0004121,6.86e-29,95;UBERON:0000924,6.86e-29,95;UBERON:0006601,6.86e-29,95;UBERON:0003080,1.53e-27,40;UBERON:0002780,3.99e-26,39;UBERON:0001890,3.99e-26,39;UBERON:0006240,3.99e-26,39;UBERON:0003056,1.29e-22,49;UBERON:0010314,4.02e-22,92;UBERON:0000956,6.04e-18,21;UBERON:0001869,6.04e-18,21;UBERON:0000203,6.04e-18,21;UBERON:0002021,9.67e-17,10;UBERON:0000411,9.67e-17,10;UBERON:0001950,9.67e-17,10;UBERON:0003076,5.26e-13,12;UBERON:0003057,5.26e-13,12;UBERON:0002619,5.41e-13,17;UBERON:0000025,6.07e-13,114;UBERON:0002420,2.11e-12,8;UBERON:0007245,2.11e-12,8;UBERON:0010009,2.11e-12,8;UBERON:0010011,2.11e-12,8;UBERON:0000454,2.11e-12,8;UBERON:0004111,1.89e-11,122;UBERON:0002240,2.01e-09,6;UBERON:0005174,2.01e-09,6;UBERON:0001137,2.01e-09,6;UBERON:0000369,5.53e-08,5;UBERON:0002435,5.53e-08,5;UBERON:0001948,5.53e-08,5;UBERON:0002315,5.53e-08,5;UBERON:0000204,5.53e-08,5;UBERON:0010082,5.53e-08,5;UBERON:0011216,1.09e-07,194;UBERON:0002950,1.84e-07,4;UBERON:0001891,1.84e-07,4;UBERON:0009616,1.84e-07,4;UBERON:0010286,1.84e-07,4
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,2.29616883407888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,0.528990979272033,2.53532561402472,0,0.889294796111139,0,0,0,0,0,1.55534418462716,1.4850653216486,1.89292465216244,1.99955689082663,3.97563373712904,0.979926393719632,0.383381884072945,0,5.50579404996943,9.3211756802187,7.52672012955593,2.76961204233407,2.01272815925301,1.04182674111352,5.58365998002762,7.31591393041184,7.94550888439413,2.94628585473668,3.27454865837937,2.79599168737951,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,0,0.29688427812965,0.346970653532272,0.608930956624282,0.230615497256059,0.60289056221049,1.41106448562846,0,0.247194967734374,0,0,0,0,0,0,11.1256702864388,13.4045892360611,0,0,0,0,6.89036941262184,23.7900313465686,1.7591609295801,10.6032835317289,8.69432554923124,9.97382613885888,13.9527486238272,0.305518091550949,0,0,0.420883711772948,0,0,0,0,0.680364991513279,0.384341160854549,0.468508622798644,1.03481348295606,0,0,0,0,0,0,0,1.19420560091096,0,0,0,0,0.469052119962192,0.180062061461015,0.23674473558521,0.196764231747404,0,0,0,0,0,0,0,0,0,0,12.1968170167194,2.26390147234426,0,0,0,0,0.128867461322093,0,0,0.190225626112559,0,0,0.251335208800269,0,0.19496408711912,0,0,0,0.189667900953082,0.456994050438915,0,0.407302655690628,0.193952487167626,0.210407459670956,0.252946148497029,0.295220295959204,0,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,8.83028244932856,8.32202974804643,0,0,0.94652465824877,0,1.50796378412959,0.716906393857656,0.668396022247182,1.13230612315533,0.404810701674894,0,0,11.5675673911851,0.425820255624806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02131881726136,0.18006109403131,0,0,0.354680467284547,0,0,0.913394847343798,0,0,0,0,0,0,0,0,0,6.11903496634682,0.170870880797853,0,0,0.376736914009382,0.410082683163076,0.915112692826091,0,0,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0,0.218362563746178,0,0.247960367176008,0,0,0,0,0.149516546043979,0.66183396182839,0.388902376688095,0.258319646955462,1.01373675294467,0.704143431874524,0.39061315453185,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,7.90652579663893,12.4287813856938,5.15605962095457,4.98374228796694,8.90607275701835,9.82012066606611,4.05013500139084,7.65546045481175,5.89085131679466,8.28416498802912,0,0.399024873401031,0.341467211508268,0.486213434136588,0,0.919217542250071,0.666740183404846,1.03017528619447,0.962757628775446,0.252697211763798,1.2673964994512,0.754505365544305,1.40462261204824,0.89635213366817,0.746661096422973,0,0.347652977834566,0.77163688185482,0.412085900803307,0.883193520806384,0.685738504770831,0.70990322463735,0.715308569841963,1.0174249164263,0.752875043322645,0.761531471025089,0.182927972872773,0.263069711437843,0.543216455383447,0,0.830445126869219,0.29551344712669,0.818462086339379,0.77468420592983,0.964533054905707,0.499621155875892,0.233931608445408,1.07435527024149,0.191288332068843,0,0
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,2.29616883407888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,0.528990979272033,2.53532561402472,0,0.889294796111139,0,0,0,0,0,1.55534418462716,1.4850653216486,1.89292465216244,1.99955689082663,3.97563373712904,0.979926393719632,0.383381884072945,0,5.50579404996943,9.3211756802187,7.52672012955593,2.76961204233407,2.01272815925301,1.04182674111352,5.58365998002762,7.31591393041184,7.94550888439413,2.94628585473668,3.27454865837937,2.79599168737951,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,0,0.29688427812965,0.346970653532272,0.608930956624282,0.230615497256059,0.60289056221049,1.41106448562846,0,0.247194967734374,0,0,0,0,0,0,11.1256702864388,13.4045892360611,0,0,0,0,6.89036941262184,23.7900313465686,1.7591609295801,10.6032835317289,8.69432554923124,9.97382613885888,13.9527486238272,0.305518091550949,0,0,0.420883711772948,0,0,0,0,0.680364991513279,0.384341160854549,0.468508622798644,1.03481348295606,0,0,0,0,0,0,0,1.19420560091096,0,0,0,0,0.469052119962192,0.180062061461015,0.23674473558521,0.196764231747404,0,0,0,0,0,0,0,0,0,0,12.1968170167194,2.26390147234426,0,0,0,0,0.128867461322093,0,0,0.190225626112559,0,0,0.251335208800269,0,0.19496408711912,0,0,0,0.189667900953082,0.456994050438915,0,0.407302655690628,0.193952487167626,0.210407459670956,0.252946148497029,0.295220295959204,0,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,8.83028244932856,8.32202974804643,0,0,0.94652465824877,0,1.50796378412959,0.716906393857656,0.668396022247182,1.13230612315533,0.404810701674894,0,0,11.5675673911851,0.425820255624806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02131881726136,0.18006109403131,0,0,0.354680467284547,0,0,0.913394847343798,0,0,0,0,0,0,0,0,0,6.11903496634682,0.170870880797853,0,0,0.376736914009382,0.410082683163076,0.915112692826091,0,0,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0,0.218362563746178,0,0.247960367176008,0,0,0,0,0.149516546043979,0.66183396182839,0.388902376688095,0.258319646955462,1.01373675294467,0.704143431874524,0.39061315453185,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,7.90652579663893,12.4287813856938,5.15605962095457,4.98374228796694,8.90607275701835,9.82012066606611,4.05013500139084,7.65546045481175,5.89085131679466,8.28416498802912,0,0.399024873401031,0.341467211508268,0.486213434136588,0,0.919217542250071,0.666740183404846,1.03017528619447,0.962757628775446,0.252697211763798,1.2673964994512,0.754505365544305,1.40462261204824,0.89635213366817,0.746661096422973,0,0.347652977834566,0.77163688185482,0.412085900803307,0.883193520806384,0.685738504770831,0.70990322463735,0.715308569841963,1.0174249164263,0.752875043322645,0.761531471025089,0.182927972872773,0.263069711437843,0.543216455383447,0,0.830445126869219,0.29551344712669,0.818462086339379,0.77468420592983,0.964533054905707,0.499621155875892,0.233931608445408,1.07435527024149,0.191288332068843,0,0
|short_description=p10@Rbfox1
}}
}}

Latest revision as of 16:53, 25 September 2015

Short description:p10@Rbfox1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_10_at_Rbfox1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 477bp_to_NM_021477, uc007ycb.2, uc007ycc.2, uc012abb.1_5end
EntrezGene:Rbfox1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p10@Rbfox1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.56
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.49
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.98
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F39.32
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.53
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.77
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.01
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.58
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.95
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.80
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C11.41
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B211.13
cerebellum, neonate N30.CNhs11135.1395-42I213.40
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A46.89
corpus striatum, adult.CNhs10487.19-21D823.79
corpus striatum, neonate N00.CNhs11226.630-43F11.76
cortex, adult.CNhs10473.12-14D510.60
cortex, neonate N30.CNhs11107.1392-42F28.69
diencephalon, adult.CNhs10482.20-12F29.97
diencephalon, neonate N30.CNhs11201.1388-42B213.95
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.68
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E812.20
hippocampus, neonate N00.CNhs11228.627-43G12.26
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C28.83
medulla oblongata, neonate N30.CNhs11200.1396-42A38.32
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I911.57
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C96.12
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B70.70
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.91
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A212.43
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.16
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.98
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.91
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.82
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A77.66
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.89
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A98.28
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.90
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)8.91e-1923
neuroblast (sensu Vertebrata)8.91e-1923
neuron1.27e-1433
neuronal stem cell1.27e-1433
neuroblast1.27e-1433
electrically signaling cell1.27e-1433
electrically responsive cell1.40e-1139
electrically active cell1.40e-1139
neural cell4.93e-1043
ectodermal cell1.08e-0944
neurectodermal cell1.08e-0944

Uber anatomy
Ontology termp-valuen
regional part of nervous system9.53e-4454
neural tube1.74e-4052
neural rod1.74e-4052
future spinal cord1.74e-4052
neural keel1.74e-4052
central nervous system3.31e-3973
nervous system7.41e-3875
gray matter7.43e-3634
neurectoderm1.38e-3464
neural plate1.38e-3464
presumptive neural plate1.38e-3464
brain8.80e-3447
future brain8.80e-3447
regional part of brain4.06e-3246
ecto-epithelium5.17e-2973
brain grey matter6.02e-2929
regional part of telencephalon6.02e-2929
telencephalon6.02e-2929
ectoderm-derived structure6.86e-2995
ectoderm6.86e-2995
presumptive ectoderm6.86e-2995
anterior neural tube1.53e-2740
regional part of forebrain3.99e-2639
forebrain3.99e-2639
future forebrain3.99e-2639
pre-chordal neural plate1.29e-2249
structure with developmental contribution from neural crest4.02e-2292
cerebral cortex6.04e-1821
cerebral hemisphere6.04e-1821
pallium6.04e-1821
occipital lobe9.67e-1710
visual cortex9.67e-1710
neocortex9.67e-1710
posterior neural tube5.26e-1312
chordal neural plate5.26e-1312
regional part of cerebral cortex5.41e-1317
tube6.07e-13114
basal ganglion2.11e-128
nuclear complex of neuraxis2.11e-128
aggregate regional part of brain2.11e-128
collection of basal ganglia2.11e-128
cerebral subcortex2.11e-128
anatomical conduit1.89e-11122
spinal cord2.01e-096
dorsal region element2.01e-096
dorsum2.01e-096
corpus striatum5.53e-085
striatum5.53e-085
regional part of spinal cord5.53e-085
gray matter of spinal cord5.53e-085
ventral part of telencephalon5.53e-085
future corpus striatum5.53e-085
organ system subdivision1.09e-07194
regional part of midbrain1.84e-074
midbrain1.84e-074
presumptive midbrain1.84e-074
midbrain neural tube1.84e-074
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