Personal tools

FFCP PHASE1:Mm9::chr19:41818155..41818196,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr19:41818155..41818196,-
|DHSsupport=NA
|short_description=p1@Slit1
|DPIdataset=NA
|description=CAGE_peak_1_at_Slit1_5end
|association_with_transcript=0bp_to_ENSMUST00000025993_5end
|EntrezGene=20562
|EntrezGene=20562
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=Q80TR4
|UniProt=Q80TR4
|association_with_transcript=0bp_to_ENSMUST00000025993_5end
|cluster_id=chr19:41818155..41818196,-
|description=CAGE_peak_1_at_Slit1_5end
|id=chr19:41818155..41818196,-
|ontology_enrichment_celltype=CL:0000117!3.91e-18!23;CL:0000337!3.91e-18!23;CL:0000540!4.67e-18!33;CL:0000047!4.67e-18!33;CL:0000031!4.67e-18!33;CL:0000404!4.67e-18!33;CL:0002319!3.22e-15!43;CL:0000221!1.82e-14!44;CL:0000133!1.82e-14!44;CL:0000393!1.78e-13!39;CL:0000211!1.78e-13!39;CL:0000055!2.93e-11!50
|ontology_enrichment_celltype_v019_2=CL:0000117,6.48e-25,23;CL:0000337,6.48e-25,23;CL:0000540,2.53e-23,33;CL:0000047,2.53e-23,33;CL:0000031,2.53e-23,33;CL:0000404,2.53e-23,33;CL:0000393,5.41e-18,39;CL:0000211,5.41e-18,39;CL:0002319,1.31e-17,43;CL:0000221,6.03e-17,44;CL:0000133,6.03e-17,44;CL:0002609,3.91e-07,6;CL:0002321,8.28e-07,70
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.91e-31!75;UBERON:0001016!1.91e-31!75;UBERON:0001017!3.46e-31!73;UBERON:0005743!3.46e-31!73;UBERON:0004121!4.61e-26!102;UBERON:0000924!4.61e-26!102;UBERON:0006601!4.61e-26!102;UBERON:0001049!2.71e-25!52;UBERON:0005068!2.71e-25!52;UBERON:0006241!2.71e-25!52;UBERON:0007135!2.71e-25!52;UBERON:0002346!9.19e-25!71;UBERON:0003075!9.19e-25!71;UBERON:0007284!9.19e-25!71;UBERON:0000033!1.25e-23!63;UBERON:0000955!3.17e-23!50;UBERON:0006238!3.17e-23!50;UBERON:0002616!7.34e-23!49;UBERON:0003056!2.24e-22!49;UBERON:0003080!4.63e-20!40;UBERON:0002020!9.04e-20!34;UBERON:0002780!2.47e-19!39;UBERON:0001890!2.47e-19!39;UBERON:0006240!2.47e-19!39;UBERON:0002791!8.77e-16!29;UBERON:0003528!8.77e-16!29;UBERON:0001893!8.77e-16!29;UBERON:0007811!9.25e-13!86;UBERON:0000153!1.62e-10!94;UBERON:0000956!2.46e-10!21;UBERON:0001869!2.46e-10!21;UBERON:0000203!2.46e-10!21;UBERON:0002619!8.08e-08!17;UBERON:0002420!7.22e-07!8;UBERON:0007245!7.22e-07!8;UBERON:0010009!7.22e-07!8;UBERON:0010011!7.22e-07!8;UBERON:0000454!7.22e-07!8
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.44e-36,73;UBERON:0001016,2.40e-34,75;UBERON:0000073,1.77e-32,54;UBERON:0004121,9.23e-32,95;UBERON:0000924,9.23e-32,95;UBERON:0006601,9.23e-32,95;UBERON:0002346,1.34e-31,64;UBERON:0003075,1.34e-31,64;UBERON:0007284,1.34e-31,64;UBERON:0001049,4.12e-30,52;UBERON:0005068,4.12e-30,52;UBERON:0006241,4.12e-30,52;UBERON:0007135,4.12e-30,52;UBERON:0002020,4.94e-28,34;UBERON:0010371,1.97e-25,73;UBERON:0003056,8.10e-25,49;UBERON:0000955,2.85e-24,47;UBERON:0006238,2.85e-24,47;UBERON:0003080,5.30e-24,40;UBERON:0002616,9.03e-24,46;UBERON:0002780,5.20e-23,39;UBERON:0001890,5.20e-23,39;UBERON:0006240,5.20e-23,39;UBERON:0003528,2.30e-22,29;UBERON:0002791,2.30e-22,29;UBERON:0001893,2.30e-22,29;UBERON:0010314,2.02e-17,92;UBERON:0000956,1.27e-14,21;UBERON:0001869,1.27e-14,21;UBERON:0000203,1.27e-14,21;UBERON:0002619,4.83e-11,17;UBERON:0002420,4.82e-09,8;UBERON:0007245,4.82e-09,8;UBERON:0010009,4.82e-09,8;UBERON:0010011,4.82e-09,8;UBERON:0000454,4.82e-09,8;UBERON:0002021,1.98e-08,10;UBERON:0000411,1.98e-08,10;UBERON:0001950,1.98e-08,10;UBERON:0002240,1.26e-07,6;UBERON:0005174,1.26e-07,6;UBERON:0001137,1.26e-07,6;UBERON:0001948,6.37e-07,5;UBERON:0002315,6.37e-07,5
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14660173558958,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48840250208714,0,0,0.279972843250725,1.43752564364972,0,0,0,0.257259436035947,0,0,16.3876333296274,10.5798195854407,24.0855933332348,0,0,0,0,0,0,0.384218305321555,12.1316846400919,10.2604513132085,9.67494822216357,17.9960120174396,15.6816664075646,8.45186514583183,21.9486128631761,15.6267193723704,12.1127469099328,15.9609172606485,17.3575382579555,14.9031505135119,27.2633177935181,14.0646610050325,9.49222196604695,18.0084035210138,22.4613424231911,24.1595440088408,30.1827963294098,29.6375118862228,0.37863096666592,0.831287161174641,0.289864488701678,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0.520455980298408,0,0,0.301445281105245,0,0,1.97755974187499,0,0,0.161766849947409,0,0,0,0.292780797011547,0.209446706813455,0.255457055208591,0,0,0,12.2828324311955,4.11750542536764,7.413606774659,9.73416193076748,6.90431734791892,10.8049783170971,6.16516799657479,0,0.248813941220186,0.505445516867349,0.210441855886474,0.260240885925407,1.14951052216736,1.98068342785884,1.9591626318643,2.4493139694478,3.20284300712124,2.90475346135159,0.776110112217047,0,0,0.351902248327898,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,25.4450837762594,6.89460902941206,0,0,0.213288250535234,0,0.515469845288373,0.201683524623343,0.22237804384487,0.380451252225118,0,0,0.502670417600539,0.198956472041151,0.19496408711912,0,0.432276099749388,0.199141273254367,0.948339504765408,1.71372768914593,4.50830942692322,2.03651327845314,0.775809948670503,1.54298803758701,0,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0.189491411770485,0,0,0,0.167506257441816,0,0.390267295715598,0.157635144106191,0,0,0,0,0,0,0,0,0,5.13761887960934,5.27452589664914,0,0,0.631016438832513,1.95219372148319,2.15423397732799,0.477937595905104,1.78238939265915,3.39691836946599,0,2.92255857911312,3.95287777946523,1.92792789853084,0,0,0,0.164970122972535,0,0.485561272309963,0.604647113929502,0.377210159511796,0.590603785761546,0.614870295887855,0.516856586336442,0.363533729477506,0,0,0,0,3.74483566329167,0.720244376125241,0.258717367565509,0.857348140126369,0.886701168211368,2.67553226403106,2.79733335023606,6.39376393140658,0,8.47328283455281,0,0,0.161464426695906,0,0,0,0.582961673259701,5.00648315428376,0,0,0,0.188368457004691,0.136694227721025,0,0,0,0,0,0,0.609958401380546,0.540026704109006,0,0.218362563746178,0,0.0826534557253359,0,0,0,0,0.149516546043979,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0.205421914329655,0.25984164595559,0,0.39736270956253,0,0.147689527174577,0,0,0,0,0.0962118416403295,0,2.0405734525369,0,0.0897138566094757,0.335769232728157,0,0,0,0,0,2.25900737046827,4.14292712856459,5.72895513439397,4.46818274093588,2.74033007908257,4.5323633843382,2.70009000092722,8.10578165803597,5.43770890781046,6.21312374102184,0.62272408550506,1.59609949360412,1.53660245178721,1.94485373654635,0.628839487883947,2.02227859295016,1.77797382241292,1.44224540067226,1.92551525755089,1.51618327058278,0.760437899670719,0.943131706930381,1.87283014939765,1.98477972455095,2.98664438569189,0.952587382566147,1.73826488917283,2.31491064556446,2.88460130562315,1.91358596174717,2.05721551431249,1.77475806159337,1.90748951957857,1.45346416632329,2.1645157495526,2.03075058940024,0.73171189149109,1.05227884575137,1.35804113845862,2.80571135828869,1.30498519936592,1.87158516513571,1.22769312950907,2.63392630016142,1.35034627686799,3.49734809113124,1.16965804222704,1.50409737833809,0.956441660344217,0.220591419119515,0.463735671240843
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14660173558958,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48840250208714,0,0,0.279972843250725,1.43752564364972,0,0,0,0.257259436035947,0,0,16.3876333296274,10.5798195854407,24.0855933332348,0,0,0,0,0,0,0.384218305321555,12.1316846400919,10.2604513132085,9.67494822216357,17.9960120174396,15.6816664075646,8.45186514583183,21.9486128631761,15.6267193723704,12.1127469099328,15.9609172606485,17.3575382579555,14.9031505135119,27.2633177935181,14.0646610050325,9.49222196604695,18.0084035210138,22.4613424231911,24.1595440088408,30.1827963294098,29.6375118862228,0.37863096666592,0.831287161174641,0.289864488701678,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0.520455980298408,0,0,0.301445281105245,0,0,1.97755974187499,0,0,0.161766849947409,0,0,0,0.292780797011547,0.209446706813455,0.255457055208591,0,0,0,12.2828324311955,4.11750542536764,7.413606774659,9.73416193076748,6.90431734791892,10.8049783170971,6.16516799657479,0,0.248813941220186,0.505445516867349,0.210441855886474,0.260240885925407,1.14951052216736,1.98068342785884,1.9591626318643,2.4493139694478,3.20284300712124,2.90475346135159,0.776110112217047,0,0,0.351902248327898,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,25.4450837762594,6.89460902941206,0,0,0.213288250535234,0,0.515469845288373,0.201683524623343,0.22237804384487,0.380451252225118,0,0,0.502670417600539,0.198956472041151,0.19496408711912,0,0.432276099749388,0.199141273254367,0.948339504765408,1.71372768914593,4.50830942692322,2.03651327845314,0.775809948670503,1.54298803758701,0,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0.189491411770485,0,0,0,0.167506257441816,0,0.390267295715598,0.157635144106191,0,0,0,0,0,0,0,0,0,5.13761887960934,5.27452589664914,0,0,0.631016438832513,1.95219372148319,2.15423397732799,0.477937595905104,1.78238939265915,3.39691836946599,0,2.92255857911312,3.95287777946523,1.92792789853084,0,0,0,0.164970122972535,0,0.485561272309963,0.604647113929502,0.377210159511796,0.590603785761546,0.614870295887855,0.516856586336442,0.363533729477506,0,0,0,0,3.74483566329167,0.720244376125241,0.258717367565509,0.857348140126369,0.886701168211368,2.67553226403106,2.79733335023606,6.39376393140658,0,8.47328283455281,0,0,0.161464426695906,0,0,0,0.582961673259701,5.00648315428376,0,0,0,0.188368457004691,0.136694227721025,0,0,0,0,0,0,0.609958401380546,0.540026704109006,0,0.218362563746178,0,0.0826534557253359,0,0,0,0,0.149516546043979,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0.205421914329655,0.25984164595559,0,0.39736270956253,0,0.147689527174577,0,0,0,0,0.0962118416403295,0,2.0405734525369,0,0.0897138566094757,0.335769232728157,0,0,0,0,0,2.25900737046827,4.14292712856459,5.72895513439397,4.46818274093588,2.74033007908257,4.5323633843382,2.70009000092722,8.10578165803597,5.43770890781046,6.21312374102184,0.62272408550506,1.59609949360412,1.53660245178721,1.94485373654635,0.628839487883947,2.02227859295016,1.77797382241292,1.44224540067226,1.92551525755089,1.51618327058278,0.760437899670719,0.943131706930381,1.87283014939765,1.98477972455095,2.98664438569189,0.952587382566147,1.73826488917283,2.31491064556446,2.88460130562315,1.91358596174717,2.05721551431249,1.77475806159337,1.90748951957857,1.45346416632329,2.1645157495526,2.03075058940024,0.73171189149109,1.05227884575137,1.35804113845862,2.80571135828869,1.30498519936592,1.87158516513571,1.22769312950907,2.63392630016142,1.35034627686799,3.49734809113124,1.16965804222704,1.50409737833809,0.956441660344217,0.220591419119515,0.463735671240843
|short_description=p1@Slit1
}}
}}

Latest revision as of 18:42, 25 September 2015

Short description:p1@Slit1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Slit1_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: 0bp_to_ENSMUST00000025993_5end
EntrezGene:Slit1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Slit1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.15
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.49
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C316.39
Mouse Granule cells, donor2.CNhs12357.11731-123E310.58
Mouse Granule cells, donor3.CNhs12108.11636-122C724.09
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D512.13
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F510.26
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D99.67
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F118.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D515.68
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D28.45
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F221.95
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D615.63
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D312.11
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F315.96
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D717.36
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D414.90
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F427.26
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D814.06
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E49.49
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E518.01
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I622.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D624.16
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F630.18
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E129.64
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F90.83
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A81.98
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A412.28
corpus striatum, adult.CNhs10487.19-21D84.12
corpus striatum, neonate N00.CNhs11226.630-43F17.41
cortex, adult.CNhs10473.12-14D59.73
cortex, neonate N30.CNhs11107.1392-42F26.90
diencephalon, adult.CNhs10482.20-12F210.80
diencephalon, neonate N30.CNhs11201.1388-42B26.17
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C91.98
eyeball, embryo E17.CNhs11023.1261-18D41.96
eyeball, neonate N00.CNhs11207.633-15C62.45
eyeball, neonate N01.CNhs11140.1532-43E73.20
eyeball, neonate N02.CNhs11205.1551-44G82.90
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E825.45
hippocampus, neonate N00.CNhs11228.627-43G16.89
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F81.71
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I22.04
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G71.54
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C25.14
medulla oblongata, neonate N30.CNhs11200.1396-42A35.27
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.15
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.40
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.92
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.95
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G83.74
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F62.68
pituitary gland, embryo E17.CNhs11039.1265-44F52.80
pituitary gland, neonate N00.CNhs11190.1308-22E96.39
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G38.47
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C95.01
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B42.04
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.14
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.73
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.47
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A78.11
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.44
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.21
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H21.54
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F22.02
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.87
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.98
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.99
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.16
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.87
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.63
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I53.50
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system7.44e-3673
nervous system2.40e-3475
regional part of nervous system1.77e-3254
ectoderm-derived structure9.23e-3295
ectoderm9.23e-3295
presumptive ectoderm9.23e-3295
neurectoderm1.34e-3164
neural plate1.34e-3164
presumptive neural plate1.34e-3164
neural tube4.12e-3052
neural rod4.12e-3052
future spinal cord4.12e-3052
neural keel4.12e-3052
gray matter4.94e-2834
ecto-epithelium1.97e-2573
pre-chordal neural plate8.10e-2549
brain2.85e-2447
future brain2.85e-2447
anterior neural tube5.30e-2440
regional part of brain9.03e-2446
regional part of forebrain5.20e-2339
forebrain5.20e-2339
future forebrain5.20e-2339
brain grey matter2.30e-2229
regional part of telencephalon2.30e-2229
telencephalon2.30e-2229
structure with developmental contribution from neural crest2.02e-1792
cerebral cortex1.27e-1421
cerebral hemisphere1.27e-1421
pallium1.27e-1421
regional part of cerebral cortex4.83e-1117
basal ganglion4.82e-098
nuclear complex of neuraxis4.82e-098
aggregate regional part of brain4.82e-098
collection of basal ganglia4.82e-098
cerebral subcortex4.82e-098
occipital lobe1.98e-0810
visual cortex1.98e-0810
neocortex1.98e-0810
spinal cord1.26e-076
dorsal region element1.26e-076
dorsum1.26e-076
regional part of spinal cord6.37e-075
gray matter of spinal cord6.37e-075
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr19:41818155..41818196,-&oldid=4207644"